prot_Ecto-sp9_F_contig9109.17300.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9109.17300.1
Unique Nameprot_Ecto-sp9_F_contig9109.17300.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length203
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9109.17300.1 vs.
Match: PDZ (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL6_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 1.290e-39
Identity = 128/193 (66.32%), Postives = 132/193 (68.39%), Query Frame = 0 
Query:   11 LQVLRGVDRVVEIEVRARDMAEQWGNGPPGRQNGGGAPPPGPRSEPRPYPGAPPPAFPWGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGVIKADHGRSTAAVDGESAAAAIRPVAETRTGQQQEQ-QEPPTALRADEVLDALGSLVGFGGDGGLGA 202
            L+VLRGVDRVVEI+VRARDMAEQWGNGPPGRQNGGGAPP GPRSE               XXXXXXXXXXXXX                                      XXXXXXXXXXXX RGVIKADHGRSTA VDGE AAAA RPVAETR  QQ++Q QEPPTALRADEVLDALGSLVGFGGDGGLGA
Sbjct:  969 LKVLRGVDRVVEIQVRARDMAEQWGNGPPGRQNGGGAPPXGPRSEXX-XXXXXXXXXXXXXXXXXXXXXXXXXPWRQQQRRQPQTRRLDKTPSQDGATGEKQEGVTQKETPXXXXXXXXXXXXRRGVIKADHGRSTAGVDGERAAAATRPVAETRNWQQEQQXQEPPTALRADEVLDALGSLVGFGGDGGLGA 1160
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9109.17300.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
PDZ1.290e-3966.32domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9109contigEcto-sp9_F_contig9109:4087..4695 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9109.17300.1mRNA_Ecto-sp9_F_contig9109.17300.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9109 4087..4695 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9109.17300.1 ID=prot_Ecto-sp9_F_contig9109.17300.1|Name=mRNA_Ecto-sp9_F_contig9109.17300.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=203bp
MFSDPNACTPLQVLRGVDRVVEIEVRARDMAEQWGNGPPGRQNGGGAPPP
GPRSEPRPYPGAPPPAFPWGGGGGSGDGAPSPPWRQQQRRQPQARRLDKA
ASQDGATGEEEEGATQKKTPPPPPPPPPASGGGRRGVIKADHGRSTAAVD
GESAAAAIRPVAETRTGQQQEQQEPPTALRADEVLDALGSLVGFGGDGGL
GA*
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