prot_Ecto-sp9_F_contig9096.17277.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9096.17277.1
Unique Nameprot_Ecto-sp9_F_contig9096.17277.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length201
Homology
BLAST of mRNA_Ecto-sp9_F_contig9096.17277.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPU7_ECTSI)

HSP 1 Score: 273 bits (697), Expect = 3.660e-81
Identity = 148/157 (94.27%), Postives = 152/157 (96.82%), Query Frame = 0
Query:   45 MCGDNNEAKGDILLCDSCDAEYHLSCCTPPLKVCPEGEWFCLTCRKNRGEPITKLFNEERAKKEATMKQHELLNKPPLPNKAGKKKRDACESPVTTKPNPKKAKSXXXXXXXXXXXXXAALPAAGSASPTLSDAASAGSLIDVTGDGSPSSSPSRNG 201
            MCGDNNEAKGDILLCDSCDAEYHLSCCTPPL+VCPEGEWFCLTCRKNRGEP+TKLFNEERAKKEATMKQHELLNKPPLPNKAGKKKRDACESPVTTKPNPKKAKS  XXXXXXXXXX A LPAAGSASPTLSDAASAGSLIDVTGDGSP+S+ SRNG
Sbjct:  168 MCGDNNEAKGDILLCDSCDAEYHLSCCTPPLQVCPEGEWFCLTCRKNRGEPVTKLFNEERAKKEATMKQHELLNKPPLPNKAGKKKRDACESPVTTKPNPKKAKSSSXXXXXXXXXXAADLPAAGSASPTLSDAASAGSLIDVTGDGSPASNTSRNG 324          
BLAST of mRNA_Ecto-sp9_F_contig9096.17277.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC98_9PHAE)

HSP 1 Score: 261 bits (667), Expect = 4.050e-77
Identity = 147/157 (93.63%), Postives = 148/157 (94.27%), Query Frame = 0
Query:   45 MCGDNNEAKGDILLCDSCDAEYHLSCCTPPLKVCPEGEWFCLTCRKNRGEPITKLFNEERAKKEATMKQHELLNKPPLPNKAGKKKRDACESPVTTKPNPKKAKSXXXXXXXXXXXXXAALPAAGSASPTLSDAASAGSLIDVTGDGSPSSSPSRNG 201
            MCGDNNEAKGDILLCDSCDAEYHLSCCTPPLKVCPEGEWFCLTCRKNRGEP+TKLFNEERAKKE TMKQHELLNKPPLPNKAGKKKRDACESPVTTKPNPKKAK XXXXXXXXXXXXX      GS SPTLSDAASAGSLIDVTGDGSPSSSPSRNG
Sbjct:  168 MCGDNNEAKGDILLCDSCDAEYHLSCCTPPLKVCPEGEWFCLTCRKNRGEPVTKLFNEERAKKEVTMKQHELLNKPPLPNKAGKKKRDACESPVTTKPNPKKAKXXXXXXXXXXXXXXXXX---GSTSPTLSDAASAGSLIDVTGDGSPSSSPSRNG 321          
BLAST of mRNA_Ecto-sp9_F_contig9096.17277.1 vs.
Match: Zinc (finger, PHD-finger n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=Q01B57_OSTTA)

HSP 1 Score: 65.5 bits (158), Expect = 6.390e-9
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 0
Query:   44 LMCGDNNEAKGDILLCDSCDAEYHLSCCTPPLKVCPEGEWFCLTCRKNR 92
            ++CG +  A G +LLCDSCDAEYH  C  PPL   PEGEWFC TC +N+
Sbjct:  906 IVCGLDVMA-GVVLLCDSCDAEYHTKCLDPPLSAEPEGEWFCPTCVRNK 953          
BLAST of mRNA_Ecto-sp9_F_contig9096.17277.1 vs.
Match: Protein (RCC2 n=1 Tax=Hypsizygus marmoreus TaxID=39966 RepID=A0A369KAG9_HYPMA)

HSP 1 Score: 65.1 bits (157), Expect = 7.290e-9
Identity = 26/55 (47.27%), Postives = 31/55 (56.36%), Query Frame = 0
Query:   42 LLLMCGDNNEAKGDILLCDSCDAEYHLSCCTPPLKVCPEGEWFCLTCRKNRGEPI 96
            L + CG         L CD CD+ YHL C  PPL   P+GEWFC+ CR+  G PI
Sbjct:  440 LCVTCGKEKGEDDSPLACDKCDSPYHLGCLNPPLTAVPDGEWFCVPCRRAPGAPI 494          
BLAST of mRNA_Ecto-sp9_F_contig9096.17277.1 vs.
Match: nucleosome-remodeling (factor subunit NURF301-like n=2 Tax=Dermatophagoides farinae TaxID=6954 RepID=UPI001F0FF7AC)

HSP 1 Score: 64.3 bits (155), Expect = 1.650e-8
Identity = 26/49 (53.06%), Postives = 34/49 (69.39%), Query Frame = 0
Query:   54 GDILLCDSCDAEYHLSCCTPPLKVCPEGEWFCLTCRKNRGEPITKLFNE 102
            G++L+CDSC A +HLSC  PPLK  PE EWFC  C++N+   +T   NE
Sbjct:  362 GEMLMCDSCPAVFHLSCLDPPLKQVPEQEWFCPICKQNQVMGVTDCVNE 410          
BLAST of mRNA_Ecto-sp9_F_contig9096.17277.1 vs.
Match: Bromodomain (adjacent to zinc finger domain 2A n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TT01_CHLSO)

HSP 1 Score: 63.5 bits (153), Expect = 2.940e-8
Identity = 28/45 (62.22%), Postives = 34/45 (75.56%), Query Frame = 0
Query:   45 MCGDNNEAKGDILL-CDSCDAEYHLSCCTPPLKVCPEGEWFCLTC 88
            +CG ++E  GDILL CDSCD   HLSCC PPLK  P+G+WFC+ C
Sbjct: 1401 LCGQSDE--GDILLLCDSCDNACHLSCCNPPLKRVPKGDWFCVEC 1443          
BLAST of mRNA_Ecto-sp9_F_contig9096.17277.1 vs.
Match: Bromodomain (adjacent to zinc finger domain 2A n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V9E3_9CHLO)

HSP 1 Score: 63.2 bits (152), Expect = 3.890e-8
Identity = 27/45 (60.00%), Postives = 34/45 (75.56%), Query Frame = 0
Query:   45 MCGDNNEAKGDILL-CDSCDAEYHLSCCTPPLKVCPEGEWFCLTC 88
            +CG ++E  GD+LL CDSCD   HLSCC PPLK  P+G+WFC+ C
Sbjct: 1077 LCGQSDE--GDVLLLCDSCDNACHLSCCNPPLKRVPKGDWFCVEC 1119          
BLAST of mRNA_Ecto-sp9_F_contig9096.17277.1 vs.
Match: nucleosome-remodeling (factor subunit BPTF-like n=1 Tax=Dermatophagoides pteronyssinus TaxID=6956 RepID=A0A6P6YHV8_DERPT)

HSP 1 Score: 63.2 bits (152), Expect = 4.080e-8
Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 0
Query:   54 GDILLCDSCDAEYHLSCCTPPLKVCPEGEWFCLTCRKNRGEPITKLFNE 102
            G++L+CD+C A +HLSC  PPLK  PE EWFC  C++N+   +T   NE
Sbjct:  350 GEMLMCDTCPAVFHLSCLDPPLKQVPEQEWFCPICKQNQVMGVTDCVNE 398          
BLAST of mRNA_Ecto-sp9_F_contig9096.17277.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZE13_CHLVA)

HSP 1 Score: 62.0 bits (149), Expect = 9.690e-8
Identity = 27/45 (60.00%), Postives = 33/45 (73.33%), Query Frame = 0
Query:   45 MCGDNNEAKGDILL-CDSCDAEYHLSCCTPPLKVCPEGEWFCLTC 88
            +CG ++E  GDILL CDSCD   HLSCC PP K  P+G+WFC+ C
Sbjct: 1139 LCGQSDE--GDILLLCDSCDNACHLSCCNPPFKRVPKGDWFCVEC 1181          
BLAST of mRNA_Ecto-sp9_F_contig9096.17277.1 vs.
Match: Hypothetical (protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0PN12_9CHLO)

HSP 1 Score: 62.0 bits (149), Expect = 9.770e-8
Identity = 25/39 (64.10%), Postives = 28/39 (71.79%), Query Frame = 0
Query:   54 GDILLCDSCDAEYHLSCCTPPLKVCPEGEWFCLTCRKNR 92
            G +LLCDSCDAEYH+ C  PPL   PEGEWFC  C + R
Sbjct:  892 GVVLLCDSCDAEYHIKCLDPPLLAEPEGEWFCPKCVRER 930          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9096.17277.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized3.660e-8194.27protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.050e-7793.63protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Zinc6.390e-959.18finger, PHD-finger n=2 Tax=Ostreococcus tauri TaxI... [more]
Protein7.290e-947.27RCC2 n=1 Tax=Hypsizygus marmoreus TaxID=39966 RepI... [more]
nucleosome-remodeling1.650e-853.06factor subunit NURF301-like n=2 Tax=Dermatophagoid... [more]
Bromodomain2.940e-862.22adjacent to zinc finger domain 2A n=1 Tax=Chlorell... [more]
Bromodomain3.890e-860.00adjacent to zinc finger domain 2A n=1 Tax=Micracti... [more]
nucleosome-remodeling4.080e-851.02factor subunit BPTF-like n=1 Tax=Dermatophagoides ... [more]
Uncharacterized9.690e-860.00protein n=1 Tax=Chlorella variabilis TaxID=554065 ... [more]
Hypothetical9.770e-864.10protein n=1 Tax=Ostreococcus mediterraneus TaxID=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 38..89
e-value: 1.4E-4
score: 31.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 35..115
e-value: 3.6E-14
score: 54.1
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 45..90
e-value: 1.1E-9
score: 38.0
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 36..91
score: 9.348
NoneNo IPR availablePANTHERPTHR47162:SF3coord: 46..112
NoneNo IPR availablePANTHERPTHR47162FAMILY NOT NAMEDcoord: 46..112
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 44..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9096contigEcto-sp9_F_contig9096:406..2290 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9096.17277.1mRNA_Ecto-sp9_F_contig9096.17277.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9096 406..3605 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9096.17277.1 ID=prot_Ecto-sp9_F_contig9096.17277.1|Name=mRNA_Ecto-sp9_F_contig9096.17277.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=201bp
MPQQRTVTLGQTRTWRRWAPASCTQFPAFRSWRMARARCVFLLLMCGDNN
EAKGDILLCDSCDAEYHLSCCTPPLKVCPEGEWFCLTCRKNRGEPITKLF
NEERAKKEATMKQHELLNKPPLPNKAGKKKRDACESPVTTKPNPKKAKSS
STSSPSSAAAVAAALPAAGSASPTLSDAASAGSLIDVTGDGSPSSSPSRN
G
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD