prot_Ecto-sp9_F_contig8973.17165.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8973.17165.1
Unique Nameprot_Ecto-sp9_F_contig8973.17165.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length281
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig8973.17165.1 vs.
Match: FirrV-1-C2 (n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLX6_9PHYC)

HSP 1 Score: 254 bits (650), Expect = 7.740e-80
Identity = 126/252 (50.00%), Postives = 171/252 (67.86%), Query Frame = 0 
Query:   23 KHFLPDLASLFNTKTGVCAWCPINHTHH-NTSYEVVVLCMPLLLWFNGKARPDAMLPEIQTRAYFMQIQSHTEIPYQAFCAILEQTPFKPRQVDKQESWNRTNFLIVPLDEWKEMELRNEKTYPARHRTLSVARKKHQSFWHFGNNIAYTQCAPGDTSSGFSQAYNRTFTMEEKALIPSMGRTWTKEMLDKPVIRGFFDIPEELRGKCHIVGGKLQQETIQTHATAYAACRGNVELAMTKRLNRAKFRNTES 273
            K  +P LASLFNT+TGVCAW P+ HT     +++VVV+ + +L W++ K RPD  + E++   +FM I    +IPY+    +L +TPFKP Q+  +ES+N   F +V   EW+++E  N++ YP+R R L +A  K   F   GN +AY+Q APGD SSG+   + ++F+ EEK LIP+MGR WT EMLD P I  FF+IP +LRGKCHIVGGKL+  TIQTHA AYAA + N+E AM +RL RA+ RN ES
Sbjct:  121 KSLMPSLASLFNTRTGVCAWKPVIHTDGVGKTWKVVVIDLNILKWYHTKGRPDEKVNEMKVTKFFMSILKEVDIPYEILSELLARTPFKPHQISTKESYNTHRFWVVSFSEWQKIEEENDRRYPSRPRRLRLANPK-TPFSSKGNTVAYSQNAPGDFSSGYVPGFEKSFSPEEKKLIPTMGRAWTLEMLDSPEIVEFFNIPADLRGKCHIVGGKLEPATIQTHAAAYAADKLNIEAAMNRRLKRAEDRNKES 371
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8973.17165.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
FirrV-1-C27.740e-8050.00n=1 Tax=Feldmannia irregularis virus a TaxID=23199... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8973contigEcto-sp9_F_contig8973:636..1478 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8973.17165.1mRNA_Ecto-sp9_F_contig8973.17165.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8973 633..1478 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8973.17165.1 ID=prot_Ecto-sp9_F_contig8973.17165.1|Name=mRNA_Ecto-sp9_F_contig8973.17165.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=281bp
MKDMCMAMQRDQEQKRKEEANDKHFLPDLASLFNTKTGVCAWCPINHTHH
NTSYEVVVLCMPLLLWFNGKARPDAMLPEIQTRAYFMQIQSHTEIPYQAF
CAILEQTPFKPRQVDKQESWNRTNFLIVPLDEWKEMELRNEKTYPARHRT
LSVARKKHQSFWHFGNNIAYTQCAPGDTSSGFSQAYNRTFTMEEKALIPS
MGRTWTKEMLDKPVIRGFFDIPEELRGKCHIVGGKLQQETIQTHATAYAA
CRGNVELAMTKRLNRAKFRNTESTNKKRKR*
back to top