prot_Ecto-sp9_F_contig886.17044.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig886.17044.1
Unique Nameprot_Ecto-sp9_F_contig886.17044.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length306
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig886.17044.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLE5_ECTSI)

HSP 1 Score: 361 bits (926), Expect = 3.780e-122
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0 
Query:    1 MAGVDAAAWMESFKDYLEPVTKIALDVKDKLEGYDYPPAVVDAYKTTATAIGVEDISPVYVGVGVVAASGFLLLACRSCQAAPKKKKGRGSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDLAGKKPKPAAGGAQAAAPKASKKAPTKAPQXQGKGKGKKKPVAEAPPVITEEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEADPWGAQHAGGEWQTGPMGSQEGEWETVSHKRSKPRKEKAAVDDANAIPGGLGL 305
            MAGVDAAAWMESFKDYLEPVTKIALDVKDKLEGYDYPPAVVDAYKTTATAIGVEDISPVYVGVGVVAASGFLLLACRSCQAAPKKKKGRGSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDLAGKKPKPAAGGAQAAAPKASKKAPTKAPQXQGKGKGKKKPVAEAPPVITEEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEADPWGAQHAGGEWQTGPMGSQEGEWETVSHKRSKPRKEKAAVDDANAIPGGLGL
Sbjct:    1 MAGVDAAAWMESFKDYLEPVTKIALDVKDKLEGYDYPPAVVDAYKTTATAIGVEDISPVYVGVGVVAASGFLLLACRSCQAAPKKKKGRGSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDLAGKKPKPAAGGAQAAAPKASKKAPTKAPQXQGKGKGKKKPVAEAPPVITEEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEADPWGAQHAGGEWQTGPMGSQEGEWETVSHKRSKPRKEKAAVDDANAIPGGLGL 305
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig886.17044.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized3.780e-122100.00protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLE5... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 190..214
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..79
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..58
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 80..305

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig886contigEcto-sp9_F_contig886:25457..28731 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig886.17044.1mRNA_Ecto-sp9_F_contig886.17044.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig886 24689..29117 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig886.17044.1 ID=prot_Ecto-sp9_F_contig886.17044.1|Name=mRNA_Ecto-sp9_F_contig886.17044.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=306bp
MAGVDAAAWMESFKDYLEPVTKIALDVKDKLEGYDYPPAVVDAYKTTATA
IGVEDISPVYVGVGVVAASGFLLLACRSCQAAPKKKKGRGSKKSKARAKA
AANGSVQKNGGSGKGGPVAAAGGAAANGGSGARDLAGKKPKPAAGGAQAA
APKASKKAPTKAPQPQGKGKGKKKPVAEAPPVITEEPEAAKKLNKKKERA
AKKAKAAAAAAAEAAASKKTSKKKSTAANGSTPGGAGSRQAHQNGGGGAG
EADPWGAQHAGGEWQTGPMGSQEGEWETVSHKRSKPRKEKAAVDDANAIP
GGLGL*
back to top