prot_Ecto-sp9_F_contig886.17040.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig886.17040.1
Unique Nameprot_Ecto-sp9_F_contig886.17040.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length223
Homology
BLAST of mRNA_Ecto-sp9_F_contig886.17040.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JEG6_9PHAE)

HSP 1 Score: 406 bits (1043), Expect = 8.300e-140
Identity = 213/222 (95.95%), Postives = 217/222 (97.75%), Query Frame = 0
Query:    1 MAAAAFCYNFETSQQEDLEQVEAANREKRQKLKATKITGDVNADRVKQLRALSVKVPGSGSGAELEGAKEAPVGVLMDEAKQAFCVLAGGKEFVRDSIVAAMLAKNQIFPSLNLLVVPVEMEVANDGKGAKGLAKGFGTSLSYEEQGYVAAPVDEYGWRALMEEEFEAAERQGVVAKSSGKDGIVLLVSKKGKVLRRGVGIPMWNIIRDDVDPPPDKKKGTK 222
            MAAAAFCYNFETSQQEDLEQVEAANREKRQKLKATKIT DVNADRVKQLRALSVKVPGSG+GAELEGAKEAPVGVLMDEAKQAFCVLAGGKEFVRDSI+AAMLAKNQIFPSLNLLVVPVEMEVA+DGKGAKGLAKGFGTSLSYEEQGYVAAPVDE GWRALM EEFEAAERQGVVA+SSGKDGIVLLVSKKGKVLRRGVGIPMWNIIRDDVDPPPDK KG K
Sbjct:  187 MAAAAFCYNFETSQQEDLEQVEAANREKRQKLKATKITSDVNADRVKQLRALSVKVPGSGNGAELEGAKEAPVGVLMDEAKQAFCVLAGGKEFVRDSILAAMLAKNQIFPSLNLLVVPVEMEVASDGKGAKGLAKGFGTSLSYEEQGYVAAPVDEDGWRALMREEFEAAERQGVVAQSSGKDGIVLLVSKKGKVLRRGVGIPMWNIIRDDVDPPPDKTKGAK 408          
BLAST of mRNA_Ecto-sp9_F_contig886.17040.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z880_9STRA)

HSP 1 Score: 136 bits (342), Expect = 3.500e-35
Identity = 88/224 (39.29%), Postives = 132/224 (58.93%), Query Frame = 0
Query:    1 MAAAAFCYNFETSQQEDLEQVEAANREKRQKLKATKITGDVNADRVKQLRALSVKVPGSGSGAELEGAKEAPVGVLMDEA-----------KQAFCVLAGGKEFVRDSIVAAMLAKNQIFPSLNLLVVPVEMEVANDGKGAKGLAKGFGTSLSYEEQGYVAAPVDEYGWRALMEEEFEAAERQGVVAKSSGKDGIVLLVSKKGKVLRRGVGIPMWNIIRDDVDP 213
            +A   + YNFE  Q++ L + + A RE+    K + I  +V   RV++LR L +++  S S       K  P+GVLM EA           KQ   ++AGGKE +RD+++ A + + +IF + NLL+VPV++   +D   A    KGFG   +Y +QG+V  P +E  WRAL+ EE   A+RQG     + K G+VL+VS+ GKVLRRG+G+P W++IR D+ P
Sbjct:   97 VAVCVYAYNFENKQRQGLVEQKRAEREQAALRKQSVIPEEVTKSRVERLRELQIRLTVSES-----ETKNVPLGVLMQEAQHGLVLWHLEAKQDVVLVAGGKEMLRDAMLRATVNR-EIFTANNLLIVPVQVADPSDPTAAV-TDKGFGAKPAYFKQGFVGEPAEEDEWRALVAEEIRDADRQG--NSKAAKQGVVLVVSRDGKVLRRGLGMPKWDMIRQDLYP 311          
BLAST of mRNA_Ecto-sp9_F_contig886.17040.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TN68_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 3.450e-17
Identity = 79/231 (34.20%), Postives = 116/231 (50.22%), Query Frame = 0
Query:    1 MAAAAFCYNFETSQQED----LEQVEAANREKRQKLKATKITGDVNADRVKQLRALSVK-------VPGSGSGAELEGAKEAPVGVLMDEAKQAFCVLAGGK-EFVRDSIVAAMLAKNQIFPSLNLLVVPVEME----VANDGKGAKGLAKGFG-TSLSYEEQGYVA--APVDEYGWRALMEEEFEAAERQGVVAKSSGKDGIVLLVSKKGKVLRRGVGIPMWNIIRDDVD 212
            +AAA   + F++ Q+E     LE VE  NR         K+T D    ++  LR L+V        VP   S  E     +A V  L+ +A  +  V A    E V++++V A +   Q F + N+L+VPVE+E     A    GA    KGFG TS  + EQGYVA  AP  E  W   +E+E   AE QG V  +  K+GI + + K   V RRG+G+P+W  + ++++
Sbjct:  183 VAAAIAGWRFDSKQREQKIGALEDVETRNR--------GKVTDDAATAKLAALRELNVMLSIADADVPEGFSAPEGAVGLKAKVDDLLGKASSSVVVFASTSGERVKEALVKAQILGEQEFLNKNVLIVPVELEKLRRAARGAAGASTEKKGFGATSPVWMEQGYVAPPAPGTEKAWLEYVEQEIADAEAQGAV--NPAKEGIAICLRKNKTVSRRGLGVPLWEDVINELN 403          
BLAST of mRNA_Ecto-sp9_F_contig886.17040.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S088_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 5.020e-12
Identity = 60/193 (31.09%), Postives = 96/193 (49.74%), Query Frame = 0
Query:   29 RQKLKATKITGDVNADRVKQLRALSVKVPGSGSGAELEGAKEAPVGVLMDEAKQAFCVLAGGKEFVRDSIVAAMLAKNQIFPSLNLLVVPVEMEVANDGKG-AKGLAKGFGTSLSY-----EEQGYVAAPVDEYGWRALMEEEFEAAERQ--GVVAKSSGKDGIVLLVSKKGKVLRRGVGIPMWNIIRDDVDP 213
            R K   TK+          +L+ LS++V   GS    +  ++A V  L + AKQ   V+AG    VR+S++ A +   + F   N+LVVP       D  G +KG AK    S  Y     E     A PV++  W + ++ E + A  Q  G        +GIV+++++ GK++RRG+G+P+W  + DD+ P
Sbjct:  115 RDKRSKTKLDTSAQKSLASELQGLSLEVVVGGSE---DATRQATVQELNEGAKQHLVVVAGTTSMVRESLIKAQILGER-FARQNVLVVPYYF----DSNGPSKGFAKDTLISKPYIARIPETSDVSANPVED--WASYIQRELDTAVSQSPGATTVDLKAEGIVVVLNRDGKIVRRGLGVPLWATVIDDLAP 297          
BLAST of mRNA_Ecto-sp9_F_contig886.17040.1 vs.
Match: Hypothetical (protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CA06_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.420e-11
Identity = 61/185 (32.97%), Postives = 94/185 (50.81%), Query Frame = 0
Query:   30 QKLKATKITGDVNADRVKQLRALSVKVPGSGSGAELEGAKEAPVGVLMDEAKQAFCVLAGGKEFVRDSIVAAMLAKNQIFPSLNLLVVPVEMEVANDGKGAKGLAK---------GFGTSLSYEEQGYVAAPVDEYGWRALMEEEF-EAAERQGVVAKSSGKDGIVLLVSKKGKVLRRGVGIPMW 204
            +K K  K+      +R + L  LSV +  +  GA       A VG L   A+Q    + G K  +RD+++ A L K + F   N+L+VP +++        +GL K         GFG +  +E + YVA P +  GW +  E+E  +A E+ G   K+   +GIV++VS +GKV+RRGVG   W
Sbjct:  182 EKKKEAKVIKKRMQEREEVLANLSVSIRVTDDGA----VTTAKVGELQKGARQHMIFVIGPKPAIRDALLGASLMKMEKFALSNVLIVPYDID--------RGLRKTDVEQKPSGGFGDTPRWESKAYVAQP-EGIGWDSYAEDEMKDAIEQSGKRVKN---EGIVVVVSNEGKVIRRGVGTVPW 350          
BLAST of mRNA_Ecto-sp9_F_contig886.17040.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2QIB8_9DINO)

HSP 1 Score: 58.5 bits (140), Expect = 6.710e-7
Identity = 53/161 (32.92%), Postives = 80/161 (49.69%), Query Frame = 0
Query:   43 ADRVKQLRALSVKVPGSGSGAELEGAKEAPVGVLMDEAKQAFCVLAGGKEFVRDSIVAAMLAKNQIFPSLNLLVVPVEMEVANDGKGAKGLAKGF-GTSLSYEEQGYVAAP-----VDEYGWRALMEEEFEAAERQGVVAKSSGKDGIVLLVSKKGKVLRR 197
            A++  Q   LSV     G GA +   ++AP+GVL ++AKQ+    A   E V   +V +M    + F + NLLVVPV + +  + +    L+    G+ L    QG VA P      D   W  +   EF+ A+RQG  A++  + G+ LLV   GK+  R
Sbjct:   64 AEKALQPLRLSVLAGEDGQGAPVR--RQAPIGVLQEQAKQSVAFFAATSEQVIMDVVLSMRIAAKEFSTRNLLVVPVLLSL--ETRELLDLSPRIRGSKLL--NQGAVALPGAVSSEDRAAWGRIFAGEFDEADRQGAGAQAE-QQGLALLVGSSGKIATR 217          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig886.17040.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
Uncharacterized8.300e-14095.95protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more]
Uncharacterized3.500e-3539.29protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical3.450e-1734.20protein n=1 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
Hypothetical5.020e-1231.09protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Hypothetical1.420e-1132.97protein n=2 Tax=Proboscia inermis TaxID=420281 Rep... [more]
Hypothetical6.710e-732.92protein (Fragment) n=1 Tax=Brandtodinium nutricula... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 11..38
NoneNo IPR availablePANTHERPTHR35498FAMILY NOT NAMEDcoord: 27..221
NoneNo IPR availablePANTHERPTHR35498:SF1LOW PSII ACCUMULATION-LIKE PROTEINcoord: 27..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig886contigEcto-sp9_F_contig886:1224..3205 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig886.17040.1mRNA_Ecto-sp9_F_contig886.17040.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig886 8..3805 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig886.17040.1 ID=prot_Ecto-sp9_F_contig886.17040.1|Name=mRNA_Ecto-sp9_F_contig886.17040.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=223bp
MAAAAFCYNFETSQQEDLEQVEAANREKRQKLKATKITGDVNADRVKQLR
ALSVKVPGSGSGAELEGAKEAPVGVLMDEAKQAFCVLAGGKEFVRDSIVA
AMLAKNQIFPSLNLLVVPVEMEVANDGKGAKGLAKGFGTSLSYEEQGYVA
APVDEYGWRALMEEEFEAAERQGVVAKSSGKDGIVLLVSKKGKVLRRGVG
IPMWNIIRDDVDPPPDKKKGTK*
back to top