prot_Ecto-sp9_F_contig885.17032.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig885.17032.1
Unique Nameprot_Ecto-sp9_F_contig885.17032.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length170
Homology
BLAST of mRNA_Ecto-sp9_F_contig885.17032.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB7_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 1.130e-81
Identity = 138/142 (97.18%), Postives = 140/142 (98.59%), Query Frame = 0
Query:   29 MLHGGVTPRPASSS-HLHSVRAVGVGALRMADGDGDAMSAAEETAKRLKEQAAALRESAAESEAEIRPVSDKADEVTETPVPAVRPEDMPPKQKLSDDMQKRLRQELISQGADPNRSAGNPILVVAGIIAVLVIVGGQGIFY 169
            MLHGGVTPRPASSS HLHSVRAVGVGALRMADGDGDAMSAAEETAKRLKEQAAALRESAAESEAEIRP SDKADEVTETPVPAVRPEDMPPKQK+S+DMQKRLRQELISQGADPNRSAGNPILVVAGIIAVLVIVGGQGIFY
Sbjct:    1 MLHGGVTPRPASSSSHLHSVRAVGVGALRMADGDGDAMSAAEETAKRLKEQAAALRESAAESEAEIRPASDKADEVTETPVPAVRPEDMPPKQKISNDMQKRLRQELISQGADPNRSAGNPILVVAGIIAVLVIVGGQGIFY 142          
BLAST of mRNA_Ecto-sp9_F_contig885.17032.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2G0_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.180e-14
Identity = 50/100 (50.00%), Postives = 66/100 (66.00%), Query Frame = 0
Query:   70 ETAKRLKEQAAALRESAAESEAEIRPVSDKADEVTETPVPAVRPEDMPPKQKLSDDMQKRLRQELISQGADPNRSAGNPILVVAGIIAVLVIVGGQGIFY 169
            E A RLK + A   +  AE  A     +    E  E  VP V+ ++  P + +S++M+ +LR+ELISQGADPNR++GNPIL+V  IIAVLVI GGQGIFY
Sbjct:   54 EEAARLKAEVAQFEKEKAEKMAAKAAAAPAKQE--EEVVPLVKNQEYKPTE-MSENMKNKLRRELISQGADPNRASGNPILIVGAIIAVLVIAGGQGIFY 150          
BLAST of mRNA_Ecto-sp9_F_contig885.17032.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMY3_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 4.490e-14
Identity = 52/99 (52.53%), Postives = 68/99 (68.69%), Query Frame = 0
Query:   72 AKRLKEQAAALRESAAESEAEIRPVSDKADEVTETPVPAVRPEDMPPKQK-LSDDMQKRLRQELISQGADPNRSAGNPILVVAGIIAVLVIVGGQGIFY 169
            A+RL +QAA LRE  A  E +    + KA+ V      A   E+   K+K LS+ M+ +LR+ELISQGADPNRS+GN IL+VA +I VLV++GGQGIFY
Sbjct:   59 AQRLSDQAAKLREEIAAMEGDRPKPAPKAEPVQ---AKADAEEEAGFKEKELSEAMKAKLRKELISQGADPNRSSGNGILIVAAVIGVLVVLGGQGIFY 154          
BLAST of mRNA_Ecto-sp9_F_contig885.17032.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D594_HETAK)

HSP 1 Score: 71.2 bits (173), Expect = 1.350e-12
Identity = 47/100 (47.00%), Postives = 67/100 (67.00%), Query Frame = 0
Query:   70 ETAKRLKEQAAALRESAAESEAEIRPVSDKADEVTETPVPAVRPEDMPPKQKLSDDMQKRLRQELISQGADPNRSAGNPILVVAGIIAVLVIVGGQGIFY 169
            E AK+L EQAAALR  A   EAE +     A         A+  E+  P+ ++S  M+++LR+EL +QGA+PN++A NPIL+++G+IAVLVI+ G GIFY
Sbjct:   52 EKAKKLAEQAAALRAEADAMEAEKKASMPAAXXXXXXXXXAM--EEELPRVEISSAMKEKLRRELEAQGANPNKAAANPILIISGVIAVLVILAGGGIFY 149          
BLAST of mRNA_Ecto-sp9_F_contig885.17032.1 vs.
Match: Uncharacterized (protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H860_VITBC)

HSP 1 Score: 62.8 bits (151), Expect = 2.400e-9
Identity = 31/51 (60.78%), Postives = 41/51 (80.39%), Query Frame = 0
Query:  119 KQKLSDDMQKRLRQELISQGADPNRSAGNPILVVAGIIAVLVIVGGQGIFY 169
            K ++S DM+KRL +EL  QGA+PN+S GNP L++  IIA LVI+GG+GIFY
Sbjct:  102 KPEISPDMKKRLLRELEGQGANPNKSRGNPYLIIFVIIAALVILGGKGIFY 152          
BLAST of mRNA_Ecto-sp9_F_contig885.17032.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TC08_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 8.690e-9
Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = 0
Query:  115 DMPPKQKLSDDMQKRLRQELISQGADPNRSAGNPILVVAGIIAVLVIVGGQGIFY 169
            +MPP   LSD+M+++L  E   QGAD N S GNPIL++A +I VLV++GG+G FY
Sbjct:   79 EMPPPTPLSDNMRQKLLNEARGQGADYNTSNGNPILLIAVVIGVLVVLGGKGFFY 133          
BLAST of mRNA_Ecto-sp9_F_contig885.17032.1 vs.
Match: Symplekin_C (domain-containing protein n=2 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZL2_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 1.640e-6
Identity = 27/48 (56.25%), Postives = 37/48 (77.08%), Query Frame = 0
Query:  122 LSDDMQKRLRQELISQGADPNRSAGNPILVVAGIIAVLVIVGGQGIFY 169
            LSD+M+++L  E   QGAD N S GNPIL++A +I VLV++GG+G FY
Sbjct:  166 LSDNMRQKLLNEARGQGADYNTSNGNPILLIAVVIGVLVVLGGKGFFY 213          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig885.17032.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
Uncharacterized1.130e-8197.18protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Hypothetical1.180e-1450.00protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Uncharacterized4.490e-1452.53protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical1.350e-1247.00protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Uncharacterized2.400e-960.78protein n=2 Tax=Vitrella brassicaformis TaxID=1169... [more]
Uncharacterized8.690e-954.55protein n=1 Tax=Nannochloropsis gaditana TaxID=725... [more]
Symplekin_C1.640e-656.25domain-containing protein n=2 Tax=Nannochloropsis ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 65..92
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 169..169
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..148
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 149..168
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..23
score: 0.599
NoneNo IPR availableTMHMMTMhelixcoord: 146..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig885contigEcto-sp9_F_contig885:7964..10921 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig885.17032.1mRNA_Ecto-sp9_F_contig885.17032.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig885 7878..12012 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig885.17032.1 ID=prot_Ecto-sp9_F_contig885.17032.1|Name=mRNA_Ecto-sp9_F_contig885.17032.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=170bp
MLSMNALVASGLLAAFVGQTANAFVSPSMLHGGVTPRPASSSHLHSVRAV
GVGALRMADGDGDAMSAAEETAKRLKEQAAALRESAAESEAEIRPVSDKA
DEVTETPVPAVRPEDMPPKQKLSDDMQKRLRQELISQGADPNRSAGNPIL
VVAGIIAVLVIVGGQGIFY*
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