prot_Ecto-sp9_F_contig8842.17026.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig8842.17026.1
Unique Name	prot_Ecto-sp9_F_contig8842.17026.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	107

Homology

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BLAST of mRNA_Ecto-sp9_F_contig8842.17026.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQR3_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 3.990e-44
Identity = 87/107 (81.31%), Postives = 87/107 (81.31%), Query Frame = 0

Query:    1 CEDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGAASSXXXXXXXXXXXXXXXNATSRRGVGRNKTSPVGGRSVRREGSSHSGDADRVSP 107
            CEDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGAASS               NA SRRGVGRNK S VGG SVRREGSS SGDADRVSP
Sbjct:  268 CEDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGAASSDNPTTSGKGGDGGG-NAASRRGVGRNKPSSVGGSSVRREGSSESGDADRVSP 373

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BLAST of mRNA_Ecto-sp9_F_contig8842.17026.1 vs.
Match: WW (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ9_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 2.210e-40
Identity = 82/107 (76.64%), Postives = 82/107 (76.64%), Query Frame = 0

Query:    1 CEDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGAASSXXXXXXXXXXXXXXXNATSRRGVGRNKTSPVGGRSVRREGSSHSGDADRVSP 107
            C DCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGAASS                A SRRGVGRN  S VGG SVRREGSS SG AD VSP
Sbjct: 1066 CGDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGAASSDGNPSTSGTGGDGGGTAASRRGVGRNNPSSVGGSSVRREGSSQSGGADCVSP 1172

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BLAST of mRNA_Ecto-sp9_F_contig8842.17026.1 vs.
Match: Uncharacterized (protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DAQ6_9FUNG)

HSP 1 Score: 52.4 bits (124), Expect = 1.400e-5
Identity = 24/46 (52.17%), Postives = 28/46 (60.87%), Query Frame = 0

Query:    1 CEDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFF 46
            C  CGRTFAP RL  H   C      RR+ +DP+ MRARGT LE +
Sbjct:  377 CGACGRTFAPDRLAKHESVCARPAARRRKVFDPRVMRARGTELEAY 422

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig8842.17026.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig8842.17026.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
Uncharacterized	3.990e-44	81.31	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
WW	2.210e-40	76.64	domain-containing protein n=1 Tax=Ectocarpus silic...	[more]
Uncharacterized	1.400e-5	52.17	protein n=2 Tax=Synchytrium endobioticum TaxID=286...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60		coord: 1..28 e-value: 1.6E-5 score: 26.7

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig8842	contig	Ecto-sp9_F_contig8842:2786..4544 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig8842.17026.1	mRNA_Ecto-sp9_F_contig8842.17026.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig8842 2786..4546 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig8842.17026.1 ID=prot_Ecto-sp9_F_contig8842.17026.1|Name=mRNA_Ecto-sp9_F_contig8842.17026.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=107bp
CEDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPI
GAASSDDNPSTSSKGGDGGGNATSRRGVGRNKTSPVGGRSVRREGSSHSG
DADRVSP