prot_Ecto-sp9_F_contig8842.17025.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8842.17025.1
Unique Nameprot_Ecto-sp9_F_contig8842.17025.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length130
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig8842.17025.1 vs.
Match: WW (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ9_ECTSI)

HSP 1 Score: 238 bits (608), Expect = 1.820e-70
Identity = 124/130 (95.38%), Postives = 125/130 (96.15%), Query Frame = 0 
Query:    1 VRRQLFSEDSEARPLVFCPFCGEGVVRAGGLRDHLQECYVLDRCRGSETHKQVEVAIRAVSVEHQMHTNSATNIHGKGASSLNDGSFQDSSTLLQHALPPFVSKESGPENVLAPAVASGNSELGGVVATG 130
            VRRQLFSEDSEARPLVFCPFCGEGVVRAGGLRDHLQECYVLDRCRGSETHKQVEVAIRAVSVEHQMHT SATN HGKGASSLN GSFQDSSTLLQHALPPFVSK +GPENVLAPAVAS NSELGGVVATG
Sbjct:  906 VRRQLFSEDSEARPLVFCPFCGEGVVRAGGLRDHLQECYVLDRCRGSETHKQVEVAIRAVSVEHQMHT-SATNTHGKGASSLNGGSFQDSSTLLQHALPPFVSKGNGPENVLAPAVASENSELGGVVATG 1034
[Close]
BLAST of mRNA_Ecto-sp9_F_contig8842.17025.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQR3_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 6.710e-67
Identity = 117/130 (90.00%), Postives = 121/130 (93.08%), Query Frame = 0 
Query:    1 VRRQLFSEDSEARPLVFCPFCGEGVVRAGGLRDHLQECYVLDRCRGSETHKQVEVAIRAVSVEHQMHTNSATNIHGKGASSLNDGSFQDSSTLLQHALPPFVSKESGPENVLAPAVASGNSELGGVVATG 130
            VRRQLFSEDSEARPLVFCPFCGEGVVRA GLRDHLQECYVLDRCRGSETHKQVEVAI+AVSVE+QMHT SATN HG+ ASSLNDGSFQDSSTLLQHAL PFVSK + PENVLAPAVAS NSELG VVATG
Sbjct:  108 VRRQLFSEDSEARPLVFCPFCGEGVVRARGLRDHLQECYVLDRCRGSETHKQVEVAIKAVSVENQMHT-SATNTHGRRASSLNDGSFQDSSTLLQHALSPFVSKGNDPENVLAPAVASENSELGRVVATG 236
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8842.17025.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
WW1.820e-7095.38domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Uncharacterized6.710e-6790.00protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8842contigEcto-sp9_F_contig8842:392..2668 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8842.17025.1mRNA_Ecto-sp9_F_contig8842.17025.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8842 392..2670 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8842.17025.1 ID=prot_Ecto-sp9_F_contig8842.17025.1|Name=mRNA_Ecto-sp9_F_contig8842.17025.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=130bp
VRRQLFSEDSEARPLVFCPFCGEGVVRAGGLRDHLQECYVLDRCRGSETH
KQVEVAIRAVSVEHQMHTNSATNIHGKGASSLNDGSFQDSSTLLQHALPP
FVSKESGPENVLAPAVASGNSELGGVVATG
back to top