prot_Ecto-sp9_F_contig8840.17022.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8840.17022.1
Unique Nameprot_Ecto-sp9_F_contig8840.17022.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length129
Homology
BLAST of mRNA_Ecto-sp9_F_contig8840.17022.1 vs.
Match: UBA (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4B9_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 9.360e-42
Identity = 90/98 (91.84%), Postives = 90/98 (91.84%), Query Frame = 0
Query:   32 MKFVPWAGVAARLATTEVAPPSVFPAEGGGXXXXXXXXXXGSKRLPPAPRGAAYCFLPLPVLTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANW 129
            MKFVPWAGVAARLATTEVAPPSVFPAEGGGXXXXXXXXXXGSKRLPPAPRGAAYCFLPLPVLTGLPVHVNG        RDIWSGSDMVGDGELRANW
Sbjct:    1 MKFVPWAGVAARLATTEVAPPSVFPAEGGGXXXXXXXXXXGSKRLPPAPRGAAYCFLPLPVLTGLPVHVNG--------RDIWSGSDMVGDGELRANW 90          
BLAST of mRNA_Ecto-sp9_F_contig8840.17022.1 vs.
Match: RING-type (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL62_9STRA)

HSP 1 Score: 128 bits (321), Expect = 9.220e-32
Identity = 68/127 (53.54%), Postives = 76/127 (59.84%), Query Frame = 0
Query:    3 PIVREKWQVCNQLGGPWATAIADSEKAKFMKFVPWAGVAARLATTEVAPPSVFPAEGGGXXXXXXXXXXGSKRLPPAPRGAAYCFLPLPVLTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANW 129
            P  R++W VCNQLGG  A AIA   + + M+FVPWAGVAAR+             E  G                   RG AYCFLPLPV TGLPVHVNGYFELSSNRRDIW+G DM GDG +RA W
Sbjct:  323 PPARQRWLVCNQLGGKRANAIAADPRHELMRFVPWAGVAARVK------------EDAGAAAVR--------------RGRAYCFLPLPVFTGLPVHVNGYFELSSNRRDIWTGDDMAGDGAVRAQW 423          
BLAST of mRNA_Ecto-sp9_F_contig8840.17022.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYE3_9STRA)

HSP 1 Score: 123 bits (308), Expect = 5.170e-30
Identity = 67/125 (53.60%), Postives = 74/125 (59.20%), Query Frame = 0
Query:    5 VREKWQVCNQLGGPWATAIADSEKAKFMKFVPWAGVAARLATTEVAPPSVFPAEGGGXXXXXXXXXXGSKRLPPAPRGAAYCFLPLPVLTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANW 129
            +REKW VCNQ GG  A  +A     + MK VPWAGVAAR+         +   E G           G+  +  A  G AYCFLPLPV TG PVHVNGYFELSSNRRDIW GSDM GDG  RA W
Sbjct:  316 IREKWVVCNQFGGGRAAQMAADTSLEHMKLVPWAGVAARVG--------MHLPERGAAPWVAQWVPDGADAV--AAPGRAYCFLPLPVRTGFPVHVNGYFELSSNRRDIWHGSDMAGDGRTRAAW 430          
BLAST of mRNA_Ecto-sp9_F_contig8840.17022.1 vs.
Match: Hypothetical (protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3V6_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.190e-29
Identity = 61/127 (48.03%), Postives = 69/127 (54.33%), Query Frame = 0
Query:    3 PIVREKWQVCNQLGGPWATAIADSEKAKFMKFVPWAGVAARLATTEVAPPSVFPAEGGGXXXXXXXXXXGSKRLPPAPRGAAYCFLPLPVLTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANW 129
            P V EKW VCNQ G    + ++ S     M+ VPWAGVAA+L T                                A  GAAYCFLPLPV TGLPVHVNGYFELSS+RRD+W G DM G+G  RA W
Sbjct:   29 PDVTEKWIVCNQYGRGNVSRMSSSADHSHMELVPWAGVAAQLPTDT------------------------------ATTGAAYCFLPLPVATGLPVHVNGYFELSSDRRDVWWGDDMAGEGRARAEW 125          
BLAST of mRNA_Ecto-sp9_F_contig8840.17022.1 vs.
Match: RING-type (domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WI84_TETOB)

HSP 1 Score: 121 bits (304), Expect = 1.800e-29
Identity = 66/130 (50.77%), Postives = 80/130 (61.54%), Query Frame = 0
Query:    1 TAPIVREKWQVCNQLGGPWATAIA-DSEKAKFMKFVPWAGVAARLATTEVAPPSVFPAEGGGXXXXXXXXXXGSKRLPPAPRGAAYCFLPLPVLTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANW 129
            T   +RE+W VCNQLGG  A A+A  + + + +K VPW GVAARL+++  +  SV      G          G      A  G A+CFLPLP  TGLP+HVNGYFELSSNRRD+W GSDM G G LRA W
Sbjct:  218 TVEALREEWLVCNQLGGGEARALALKAWRDEKVKMVPWVGVAARLSSSSSS--SVSKQSSDGQVGQAAGLGLGKTHASGALAGRAFCFLPLPASTGLPLHVNGYFELSSNRRDVWHGSDMAGAGRLRAQW 345          
BLAST of mRNA_Ecto-sp9_F_contig8840.17022.1 vs.
Match: RING-type (domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WHX4_TETOB)

HSP 1 Score: 121 bits (304), Expect = 1.800e-29
Identity = 66/130 (50.77%), Postives = 80/130 (61.54%), Query Frame = 0
Query:    1 TAPIVREKWQVCNQLGGPWATAIA-DSEKAKFMKFVPWAGVAARLATTEVAPPSVFPAEGGGXXXXXXXXXXGSKRLPPAPRGAAYCFLPLPVLTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANW 129
            T   +RE+W VCNQLGG  A A+A  + + + +K VPW GVAARL+++  +  SV      G          G      A  G A+CFLPLP  TGLP+HVNGYFELSSNRRD+W GSDM G G LRA W
Sbjct: 2070 TVEALREEWLVCNQLGGGEARALALKAWRDEKVKMVPWVGVAARLSSSSSS--SVSKQSSDGQVGQAAGLGLGKTHASGALAGRAFCFLPLPASTGLPLHVNGYFELSSNRRDVWHGSDMAGAGRLRAQW 2197          
BLAST of mRNA_Ecto-sp9_F_contig8840.17022.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HJR0_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.320e-27
Identity = 72/149 (48.32%), Postives = 81/149 (54.36%), Query Frame = 0
Query:    7 EKWQVCNQLGGPWATAIADSEKAKFMKFVPWAGVAARLATTEVAPPSVFPAEG-GGXXXXXXXXXXGSKRLP------------------------PAPRGAAYCFLPLPVLTGLPVHVNGYFELSSNRRDIW-SGSDMVGDGELRANW 129
            E W VCNQLGG  A+ +A  + A+ ++ VPWAGVAARL      PP V  AEG GG          G   +                         P+  GAAYCFLPLPV TGLP+HVNGYFELSSNRRDIW S  DM GDG  RA W
Sbjct:  357 ETWMVCNQLGGGRASNMASDKAAEHLRLVPWAGVAARLD-----PPPVPCAEGDGGEADGGATMDEGMDAVEVVDGDGVIDDTQTEAGTGAASATGPSSGGAAYCFLPLPVSTGLPIHVNGYFELSSNRRDIWWSADDMSGDGRRRAVW 500          
BLAST of mRNA_Ecto-sp9_F_contig8840.17022.1 vs.
Match: Hypothetical (protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QAL4_9STRA)

HSP 1 Score: 114 bits (286), Expect = 4.800e-27
Identity = 62/124 (50.00%), Postives = 71/124 (57.26%), Query Frame = 0
Query:    6 REKWQVCNQLGGPWATAIADSEKAKFMKFVPWAGVAARLATTEVAPPSVFPAEGGGXXXXXXXXXXGSKRLPPAPRGAAYCFLPLPVLTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANW 129
            +E+W VCNQLGG  A+ +A  +    MK VPWAGVAARL+            EGG                       AYCFLPLPV T LP+HVNGYFELSSNRRD+W G DM GDG+ RA W
Sbjct:  318 KERWMVCNQLGGGNASIMARDKALDHMKLVPWAGVAARLSPD-------CNVEGGN----------------------AYCFLPLPVRTKLPIHVNGYFELSSNRRDVWWGDDMAGDGKARAEW 412          
BLAST of mRNA_Ecto-sp9_F_contig8840.17022.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CTG0_9EUKA)

HSP 1 Score: 109 bits (273), Expect = 1.030e-26
Identity = 60/125 (48.00%), Postives = 72/125 (57.60%), Query Frame = 0
Query:    5 VREKWQVCNQLGGPWATAIADSEKAKFMKFVPWAGVAARLATTEVAPPSVFPAEGGGXXXXXXXXXXGSKRLPPAPRGAAYCFLPLPVLTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANW 129
            V EK+ +   LGG  A A+A    AK  K +PWAG+AAR+                           G +  P    G+A+CFLPLPV TGLPVHVNGYFELS+NRRDIW GSDM GDGE+R+ W
Sbjct:   49 VSEKYLLFEMLGGDRARAMAVENSAKGHKLLPWAGIAARIERK------------------------GPEPGPTDIEGSAFCFLPLPVRTGLPVHVNGYFELSANRRDIWWGSDMTGDGEMRSKW 149          
BLAST of mRNA_Ecto-sp9_F_contig8840.17022.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB77_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.160e-26
Identity = 60/126 (47.62%), Postives = 71/126 (56.35%), Query Frame = 0
Query:    4 IVREKWQVCNQLGGPWATAIADSEKAKFMKFVPWAGVAARLATTEVAPPSVFPAEGGGXXXXXXXXXXGSKRLPPAPRGAAYCFLPLPVLTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANW 129
            + +E+W VCNQLGG  A+ +A       MK +PWAGVAARL+   +   + F                          GAAYCFLPLP  T LP HVNGYFELSSNRRD+W G DM GDG  RA+W
Sbjct:  328 VKKERWIVCNQLGGGNASRMAQDPGLSHMKLIPWAGVAARLSP--LVDDTSF-------------------------EGAAYCFLPLPAKTKLPCHVNGYFELSSNRRDVWWGEDMAGDGRARADW 426          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8840.17022.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UBA9.360e-4291.84domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
RING-type9.220e-3253.54domain-containing protein n=1 Tax=Tribonema minus ... [more]
Hypothetical5.170e-3053.60protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=... [more]
Hypothetical1.190e-2948.03protein n=1 Tax=Proboscia inermis TaxID=420281 Rep... [more]
RING-type1.800e-2950.77domain-containing protein n=1 Tax=Tetradesmus obli... [more]
RING-type1.800e-2950.77domain-containing protein n=1 Tax=Tetradesmus obli... [more]
Hypothetical1.320e-2748.32protein (Fragment) n=2 Tax=Odontella aurita TaxID=... [more]
Hypothetical4.800e-2750.00protein n=1 Tax=Chaetoceros debilis TaxID=122233 R... [more]
Hypothetical1.030e-2648.00protein (Fragment) n=1 Tax=Amorphochlora amoebifor... [more]
Hypothetical1.160e-2647.62protein (Fragment) n=1 Tax=Attheya septentrionalis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15600:SF42coord: 5..120
NoneNo IPR availablePANTHERPTHR15600FAMILY NOT NAMEDcoord: 5..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8840contigEcto-sp9_F_contig8840:7..1312 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8840.17022.1mRNA_Ecto-sp9_F_contig8840.17022.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8840 7..1312 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8840.17022.1 ID=prot_Ecto-sp9_F_contig8840.17022.1|Name=mRNA_Ecto-sp9_F_contig8840.17022.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=129bp
TAPIVREKWQVCNQLGGPWATAIADSEKAKFMKFVPWAGVAARLATTEVA
PPSVFPAEGGGAAGGGEGKGGGSKRLPPAPRGAAYCFLPLPVLTGLPVHV
NGYFELSSNRRDIWSGSDMVGDGELRANW
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