prot_Ecto-sp9_F_contig8828.17010.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8828.17010.1
Unique Nameprot_Ecto-sp9_F_contig8828.17010.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length179
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8828.17010.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSI2_ECTSI)

HSP 1 Score: 358 bits (919), Expect = 2.080e-117
Identity = 177/179 (98.88%), Postives = 179/179 (100.00%), Query Frame = 0 
Query:    1 GGRDGVAAVTVGHPIQRILLHLRAEGVGLEEGMSWPERGGKRADASSSYRQGYQQLDNYLVRVLAGKSAWDLPPGRVGKNELQAARIALGKFEVLLRADCLAVDLPLLQPYLAKAVPAAQVADAARETEDLLESGEAHYLVFGKEGGKLLRDNRWDLQLWDFAHELVESRSTTAEGYLC 179
            GGRDGVAAVTVGHPIQRILLHLRAEGVGLEEGMSWPERGGKRADASSSYRQGYQQLDNYLVRVLAGKSAWDLPPGRVGK+ELQAARIALGKFEVLLRADCLAVDLPLLQPYLAKAVPAAQVADAARETEDLLESGEAHYLVFGKEGGKLLRDNRWDLQLWDFAH+LVESRSTTAEGYLC
Sbjct:   76 GGRDGVAAVTVGHPIQRILLHLRAEGVGLEEGMSWPERGGKRADASSSYRQGYQQLDNYLVRVLAGKSAWDLPPGRVGKSELQAARIALGKFEVLLRADCLAVDLPLLQPYLAKAVPAAQVADAARETEDLLESGEAHYLVFGKEGGKLLRDNRWDLQLWDFAHKLVESRSTTAEGYLC 254
[Close]
BLAST of mRNA_Ecto-sp9_F_contig8828.17010.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ1_9PHAE)

HSP 1 Score: 349 bits (896), Expect = 1.200e-114
Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 0 
Query:    1 GGRDGVAAVTVGHPIQRILLHLRAEGVGLEEGMSWPERGGKRADASSSYRQGYQQLDNYLVRVLAGKSAWDLPPGRVGKNELQ----AARIALGKFEVLLRADCLAVDLPLLQPYLAKAVPAAQVADAARETEDLLESGEAHYLVFGKEGGKLLRDNRWDLQLWDFAHELVESRSTTAEGYLC 179
            GGRDGVAAVT+GHPIQRILLHLRAEGVGLEEGMSWPERGGKRADASSSYRQGYQQLDNYLVRVLAGKSAWDLPPGRVGK ELQ    AARIALGKFEVLLRADCLAVDLPLLQPYLAKAVPAAQVADAARETEDLLESGEA+YLVFGKEGGKLLRDNRWDLQLWDFAH+LVESRSTTAEGYLC
Sbjct:   76 GGRDGVAAVTIGHPIQRILLHLRAEGVGLEEGMSWPERGGKRADASSSYRQGYQQLDNYLVRVLAGKSAWDLPPGRVGKTELQVGIPAARIALGKFEVLLRADCLAVDLPLLQPYLAKAVPAAQVADAARETEDLLESGEAYYLVFGKEGGKLLRDNRWDLQLWDFAHKLVESRSTTAEGYLC 258
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8828.17010.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized2.080e-11798.88protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.200e-11495.63protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8828contigEcto-sp9_F_contig8828:472..4524 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8828.17010.1mRNA_Ecto-sp9_F_contig8828.17010.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8828 472..4525 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8828.17010.1 ID=prot_Ecto-sp9_F_contig8828.17010.1|Name=mRNA_Ecto-sp9_F_contig8828.17010.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=179bp
GGRDGVAAVTVGHPIQRILLHLRAEGVGLEEGMSWPERGGKRADASSSYR
QGYQQLDNYLVRVLAGKSAWDLPPGRVGKNELQAARIALGKFEVLLRADC
LAVDLPLLQPYLAKAVPAAQVADAARETEDLLESGEAHYLVFGKEGGKLL
RDNRWDLQLWDFAHELVESRSTTAEGYLC
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