prot_Ecto-sp9_F_contig88.16978.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig88.16978.1
Unique Nameprot_Ecto-sp9_F_contig88.16978.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length426
Homology
BLAST of mRNA_Ecto-sp9_F_contig88.16978.1 vs.
Match: Protein (ARV n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLH4_ECTSI)

HSP 1 Score: 494 bits (1272), Expect = 6.040e-171
Identity = 385/425 (90.59%), Postives = 386/425 (90.82%), Query Frame = 0
Query:    1 MAVGSSAETVSMKGSASLAEQXXXXXXXXXXXARPFVCVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAHLRHTALSSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVVEHACFAAGAVLFATSRVRTAAAXXXXXXXXXXXXXQTGRRSTRSTGTINGGRQEEDRDEYGGDGRSAADRRDDDEWRSSGDVGGTGGLGEGQPQRRXXXXXXXXXXXXXXXYESSSSYSLPPPRPDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAAKMYMAVVYPLFFRLLAAFVMIWDRQVAILNTIELLVATMQFVALSAVVGGPAAVSGMGEGGVAAMSVLAGLASKMAARAVLCLWFGSDPRTLRML 425
            MAVGSSAET+SMKGSASLAEQXXXXXXXXXXXARPFVCVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAHLRHTALSSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VEHACFAAGAVLFATSRVR AA  XXXXXXXXXXXXQTGRRSTRSTGTINGGRQEED DEYG             EWRSSGDVGGT           XXXXXXXXXXXXXXXYESSSSYSLPPPRPDS      XXXXXXXXXXX   XXXXXXXXXXXRAAKMYMAVVYPLFFRLLAAFVMIWDRQVAILNTIELLVATMQFVALSAVVGGPAAVSGMGEGGVAAMSVLAGLASKMAARAVLCLWFGSDPRTLRML
Sbjct:    1 MAVGSSAETMSMKGSASLAEQXXXXXXXXXXXARPFVCVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAHLRHTALSSEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEHACFAAGAVLFATSRVRAAA--XXXXXXXXXXXXQTGRRSTRSTGTINGGRQEEDWDEYGXXXXXXXXXXXXXEWRSSGDVGGTXXXXXXXXXXXXXXXXXXXXXXXXXXYESSSSYSLPPPRPDSSSTIPSXXXXXXXXXXXPLCXXXXXXXXXXXRAAKMYMAVVYPLFFRLLAAFVMIWDRQVAILNTIELLVATMQFVALSAVVGGPAAVSGMGEGGVAAMSVLAGLASKMAARAVLCLWFGSDPRTLRML 423          
BLAST of mRNA_Ecto-sp9_F_contig88.16978.1 vs.
Match: Protein (ARV (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CNP5_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.430e-23
Identity = 45/86 (52.33%), Postives = 61/86 (70.93%), Query Frame = 0
Query:   37 VCVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALD 122
            +CV CGR ++ +FREY+KGNIRL RC +C++VADKYIE+E VLIAID+ LHR+  YRHLLFN   +  H     +  + + +  LD
Sbjct:   16 ICVVCGRSLSHVFREYSKGNIRLSRCDHCKNVADKYIEYELVLIAIDMVLHRISVYRHLLFNRLEYQEHGVPRPIVMIAIAILCLD 101          
BLAST of mRNA_Ecto-sp9_F_contig88.16978.1 vs.
Match: Protein (ARV n=1 Tax=Salix suchowensis TaxID=1278906 RepID=A0A836DLE2_9ROSI)

HSP 1 Score: 101 bits (251), Expect = 2.960e-21
Identity = 47/87 (54.02%), Postives = 62/87 (71.26%), Query Frame = 0
Query:   38 CVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAH 124
            CVECG P+  LF +Y+ GNIRL RC  C++VAD+YIE EF++I+IDL LH+ +AYRHLLFN+    T +F G LW+       LDA+
Sbjct:   16 CVECGFPIKTLFVQYSPGNIRLMRCENCKAVADEYIECEFMIISIDLILHKTKAYRHLLFNVINQHTVNFEGSLWKSIFAFLLLDAY 102          
BLAST of mRNA_Ecto-sp9_F_contig88.16978.1 vs.
Match: Protein (ARV n=7 Tax=Populus TaxID=3689 RepID=A0A3N7FYG6_POPTR)

HSP 1 Score: 100 bits (249), Expect = 4.220e-21
Identity = 47/87 (54.02%), Postives = 61/87 (70.11%), Query Frame = 0
Query:   38 CVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAH 124
            CVECG P+  LF +Y+ GNIRL RC  C++VAD+YIE EF++I IDL LH+ +AYRHLLFN+    T +F G LW+       LDA+
Sbjct:    5 CVECGFPIKTLFVQYSPGNIRLMRCENCKAVADEYIECEFMIILIDLILHKTKAYRHLLFNVINQHTVNFEGSLWKSIFAFLLLDAY 91          
BLAST of mRNA_Ecto-sp9_F_contig88.16978.1 vs.
Match: Protein (ARV n=1 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2MPP1_RHIMU)

HSP 1 Score: 99.0 bits (245), Expect = 4.580e-21
Identity = 45/87 (51.72%), Postives = 63/87 (72.41%), Query Frame = 0
Query:   38 CVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAH 124
            CV+CG  +  LF +Y+ GNIRL +C  C++VAD+YIE EF++I IDL LH+ QAYRHLL+N+    T +F+G LW+  +G   LDA+
Sbjct:    6 CVKCGFRIKTLFVQYSPGNIRLMKCENCKAVADEYIECEFMIILIDLILHKPQAYRHLLYNVLFQETVNFQGLLWKSTIGFLVLDAY 92          
BLAST of mRNA_Ecto-sp9_F_contig88.16978.1 vs.
Match: Protein (ARV n=9 Tax=Populus TaxID=3689 RepID=A0A3N7G147_POPTR)

HSP 1 Score: 100 bits (249), Expect = 9.290e-21
Identity = 47/87 (54.02%), Postives = 61/87 (70.11%), Query Frame = 0
Query:   38 CVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAH 124
            CVECG P+  LF +Y+ GNIRL RC  C++VAD+YIE EF++I IDL LH+ +AYRHLLFN+    T +F G LW+       LDA+
Sbjct:    5 CVECGFPIKTLFVQYSPGNIRLMRCENCKAVADEYIECEFMIILIDLILHKTKAYRHLLFNVINQHTVNFEGSLWKSIFAFLLLDAY 91          
BLAST of mRNA_Ecto-sp9_F_contig88.16978.1 vs.
Match: Protein (ARV n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPQ8_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.060e-20
Identity = 44/92 (47.83%), Postives = 69/92 (75.00%), Query Frame = 0
Query:   37 VCVECGRPVAL-LFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAHLRH 127
            +C+ECG+PV   L+REY+K NIRL RC +C +VAD+ IE+E VL+ +DLALHR+ A+RH+LFN +P +   F  +LW++ + +  +D H+++
Sbjct:   45 LCIECGKPVTEGLYREYSKDNIRLSRCEFCGAVADRLIEYELVLVGLDLALHRLPAWRHILFNRQPHAKLEF-AQLWRMALVLTLVDTHIKY 135          
BLAST of mRNA_Ecto-sp9_F_contig88.16978.1 vs.
Match: Protein (ARV n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GYY3_9FUNG)

HSP 1 Score: 98.6 bits (244), Expect = 5.660e-20
Identity = 43/98 (43.88%), Postives = 64/98 (65.31%), Query Frame = 0
Query:   37 VCVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAHLRHTALSSEA 134
            +CVECG  V+ L+ EY+KGNIRL  C +C+ +ADKY+E +FV+I +D+ LH+   YRHLLFN  P+        +++LGV +   D +++   L  EA
Sbjct:    3 ICVECGAAVSSLYTEYSKGNIRLTYCEHCKKLADKYVEHDFVIIFVDMVLHKKPVYRHLLFNRLPYRDLGIDPNVFKLGVLLILFDVYIKWFRLEQEA 100          
BLAST of mRNA_Ecto-sp9_F_contig88.16978.1 vs.
Match: Protein (ARV n=12 Tax=Glomeraceae TaxID=36751 RepID=A0A2I1G244_9GLOM)

HSP 1 Score: 97.4 bits (241), Expect = 5.770e-20
Identity = 42/89 (47.19%), Postives = 59/89 (66.29%), Query Frame = 0
Query:   38 CVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAHLR 126
            CVECG PV  L+ EY+KGNIRL  C  C+  ADKY+E +FV+I ID+ LH+ Q YRHLLFN   +  H     +++LG+ +   D +++
Sbjct:    4 CVECGAPVTNLYTEYSKGNIRLTPCEKCKKFADKYVEHDFVIIFIDMLLHKPQVYRHLLFNRLEYRDHGIDPNVFKLGILLILFDVYIK 92          
BLAST of mRNA_Ecto-sp9_F_contig88.16978.1 vs.
Match: protein (ARV 2 n=1 Tax=Quercus lobata TaxID=97700 RepID=UPI0012461EB1)

HSP 1 Score: 96.7 bits (239), Expect = 3.120e-19
Identity = 45/89 (50.56%), Postives = 60/89 (67.42%), Query Frame = 0
Query:   38 CVECGRPVALLFREYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMRPFSTHSFRGRLWQLGVGMAALDAHLR 126
            CVECG  +  LF +Y+ GNIRL +C  C++VAD+YIE  F+++ IDL LH+ +AYRHLLFN+       F G LW+  VG   LDA+ R
Sbjct:    8 CVECGFRIKTLFVQYSPGNIRLMKCENCKAVADEYIECNFLILLIDLILHKPKAYRHLLFNVLKQGAPHFEGLLWKSTVGYLLLDAYRR 96          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig88.16978.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Protein6.040e-17190.59ARV n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLH4_ECT... [more]
Protein1.430e-2352.33ARV (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 Tax... [more]
Protein2.960e-2154.02ARV n=1 Tax=Salix suchowensis TaxID=1278906 RepID=... [more]
Protein4.220e-2154.02ARV n=7 Tax=Populus TaxID=3689 RepID=A0A3N7FYG6_PO... [more]
Protein4.580e-2151.72ARV n=1 Tax=Rhizophora mucronata TaxID=61149 RepID... [more]
Protein9.290e-2154.02ARV n=9 Tax=Populus TaxID=3689 RepID=A0A3N7G147_PO... [more]
Protein1.060e-2047.83ARV n=1 Tax=Nannochloropsis gaditana TaxID=72520 R... [more]
Protein5.660e-2043.88ARV n=1 Tax=Lobosporangium transversale TaxID=6457... [more]
Protein5.770e-2047.19ARV n=12 Tax=Glomeraceae TaxID=36751 RepID=A0A2I1G... [more]
protein3.120e-1950.56ARV 2 n=1 Tax=Quercus lobata TaxID=97700 RepID=UPI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007290Arv1 proteinPFAMPF04161Arv1coord: 37..190
e-value: 9.8E-31
score: 107.5
IPR007290Arv1 proteinPANTHERPTHR14467ARV1coord: 37..407
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 416..425
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 364..384
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 385..389
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 332..352
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..331
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 353..363
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 390..415
NoneNo IPR availableTMHMMTMhelixcoord: 393..415
NoneNo IPR availableTMHMMTMhelixcoord: 356..378
NoneNo IPR availableTMHMMTMhelixcoord: 332..351

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig88contigEcto-sp9_F_contig88:9381..12861 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig88.16978.1mRNA_Ecto-sp9_F_contig88.16978.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig88 9343..13090 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig88.16978.1 ID=prot_Ecto-sp9_F_contig88.16978.1|Name=mRNA_Ecto-sp9_F_contig88.16978.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=426bp
MAVGSSAETVSMKGSASLAEQQQQEAAAAAAAARPFVCVECGRPVALLFR
EYNKGNIRLGRCSYCRSVADKYIEWEFVLIAIDLALHRVQAYRHLLFNMR
PFSTHSFRGRLWQLGVGMAALDAHLRHTALSSEAAAAAAQESTGSVVVAG
DGGGDPFWEAGGLLLAAVVEHACFAAGAVLFATSRVRTAAAAAKAAKARR
NRNRQTGRRSTRSTGTINGGRQEEDRDEYGGDGRSAADRRDDDEWRSSGD
VGGTGGLGEGQPQRRQDRAGEEDGEDGEDGYESSSSYSLPPPRPDSSSTV
PSTAPSSATAAASPLCVGGGGGGGGSSRAAKMYMAVVYPLFFRLLAAFVM
IWDRQVAILNTIELLVATMQFVALSAVVGGPAAVSGMGEGGVAAMSVLAG
LASKMAARAVLCLWFGSDPRTLRML*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007290Arv1