prot_Ecto-sp9_F_contig8787.16967.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8787.16967.1
Unique Nameprot_Ecto-sp9_F_contig8787.16967.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length107
Homology
BLAST of mRNA_Ecto-sp9_F_contig8787.16967.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C6_ECTSI)

HSP 1 Score: 213 bits (543), Expect = 3.320e-65
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
Query:    1 MASSSAPPASSLGQDIKEFLENEKDIEFEEEISRNPYRLKSWWRYLLAKEGAKRKTRNIIHERALKFLPNSYKLWNQYLRERRAAVEGKCITDPACQIVVNAHERAL 107
            MASSSAPPASSLGQDIKEFLENEKDIEFEEEISRNPYRLKSWWRYLLAKEGAKRKTRNIIHERALKFLPNSYKLWNQYLRERRAAVEGKCITDPACQIVVNAHERAL
Sbjct:    1 MASSSAPPASSLGQDIKEFLENEKDIEFEEEISRNPYRLKSWWRYLLAKEGAKRKTRNIIHERALKFLPNSYKLWNQYLRERRAAVEGKCITDPACQIVVNAHERAL 107          
BLAST of mRNA_Ecto-sp9_F_contig8787.16967.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YB58_HETAK)

HSP 1 Score: 127 bits (318), Expect = 3.150e-34
Identity = 61/93 (65.59%), Postives = 75/93 (80.65%), Query Frame = 0
Query:   15 DIKEFLENEKDIEFEEEISRNPYRLKSWWRYLLAKEGAKRKTRNIIHERALKFLPNSYKLWNQYLRERRAAVEGKCITDPACQIVVNAHERAL 107
            DIK FLE+E D E+EEEISRNPY LKSWWRYL  K+ A+ KTR +++ERALKFLP S+KLW+ YL+ER  AVE K + DPA ++V NA+ERAL
Sbjct:   26 DIKSFLESEADFEYEEEISRNPYALKSWWRYLDHKKNARPKTRYVVYERALKFLPGSFKLWHSYLKERTLAVEDKSVLDPAREVVANAYERAL 118          
BLAST of mRNA_Ecto-sp9_F_contig8787.16967.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA78_9STRA)

HSP 1 Score: 131 bits (330), Expect = 7.200e-34
Identity = 64/101 (63.37%), Postives = 76/101 (75.25%), Query Frame = 0
Query:    7 PPASSLGQDIKEFLENEKDIEFEEEISRNPYRLKSWWRYLLAKEGAKRKTRNIIHERALKFLPNSYKLWNQYLRERRAAVEGKCITDPACQIVVNAHERAL 107
            P     G++++  L +  D E+E EISR P+RLK+W RYL AK    R+ RNI+HERALKFLP SYKLW+QYL ER +AVEGKCITDPACQIVVN  ERAL
Sbjct:    2 PSEDEAGEEVQALLADATDFEYETEISRAPFRLKNWVRYLAAKTSTNRRARNILHERALKFLPTSYKLWHQYLTERLSAVEGKCITDPACQIVVNTFERAL 102          
BLAST of mRNA_Ecto-sp9_F_contig8787.16967.1 vs.
Match: XAB2 ((Fragment) n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=I6M4B7_KRYMA)

HSP 1 Score: 100 bits (249), Expect = 5.660e-25
Identity = 49/83 (59.04%), Postives = 61/83 (73.49%), Query Frame = 0
Query:   25 DIEFEEEISRNPYRLKSWWRYLLAKEGAKRKTRNIIHERALKFLPNSYKLWNQYLRERRAAVEGKCITDPACQIVVNAHERAL 107
            D+ +EEEI RNPY +K W RY+  K+   + T N+I+ERAL+ LP SYKLW  YLRERR  V+GKCIT+PA + V N HERAL
Sbjct:   13 DLPYEEEIIRNPYSVKCWMRYIEFKQNGPKSTLNMIYERALRELPGSYKLWYNYLRERRKQVKGKCITEPAFEEVNNCHERAL 95          
BLAST of mRNA_Ecto-sp9_F_contig8787.16967.1 vs.
Match: SYF1 ((Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7LQ32_9TELE)

HSP 1 Score: 101 bits (252), Expect = 9.180e-25
Identity = 50/83 (60.24%), Postives = 60/83 (72.29%), Query Frame = 0
Query:   25 DIEFEEEISRNPYRLKSWWRYLLAKEGAKRKTRNIIHERALKFLPNSYKLWNQYLRERRAAVEGKCITDPACQIVVNAHERAL 107
            D+ +EEEI RNPY +K W RY+  K+   + T N+I+ERALK LP SYKLW  YLRERR  V+GKCITDP  + V N HERAL
Sbjct:   46 DLPYEEEIIRNPYSVKCWMRYIEFKQNGAKSTLNMIYERALKELPGSYKLWYNYLRERRKQVKGKCITDPTYEEVNNCHERAL 128          
BLAST of mRNA_Ecto-sp9_F_contig8787.16967.1 vs.
Match: Pre-mRNA-splicing (factor SYF1-like n=2 Tax=Alligator mississippiensis TaxID=8496 RepID=A0A151NRD7_ALLMI)

HSP 1 Score: 98.6 bits (244), Expect = 1.530e-24
Identity = 46/85 (54.12%), Postives = 63/85 (74.12%), Query Frame = 0
Query:   23 EKDIEFEEEISRNPYRLKSWWRYLLAKEGAKRKTRNIIHERALKFLPNSYKLWNQYLRERRAAVEGKCITDPACQIVVNAHERAL 107
            E+D+++EEEI RNP+ +K W RY+  K+ A R   N+++ERALK LP SYKLW  YL++RR  V+ +C+TDPA + V N HERAL
Sbjct:   19 EEDLQYEEEILRNPFSVKCWMRYIEFKQSAPRHALNLLYERALKELPGSYKLWYNYLKQRRKQVKNRCVTDPAYEEVNNCHERAL 103          
BLAST of mRNA_Ecto-sp9_F_contig8787.16967.1 vs.
Match: XPA (binding protein 2 n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672MZQ1_SINGR)

HSP 1 Score: 105 bits (262), Expect = 3.140e-24
Identity = 51/88 (57.95%), Postives = 65/88 (73.86%), Query Frame = 0
Query:   20 LENEKDIEFEEEISRNPYRLKSWWRYLLAKEGAKRKTRNIIHERALKFLPNSYKLWNQYLRERRAAVEGKCITDPACQIVVNAHERAL 107
            L+ + D+ +EEEI RNPY +K W RY+  K+ A++   N+I+ERALK LP SYKLW  YLRERR  V+GKC+TDPA + V N HERAL
Sbjct:    4 LQEDDDLPYEEEIIRNPYSVKCWMRYIEHKQNAQKSVLNMIYERALKELPGSYKLWYNYLRERRKQVKGKCVTDPAYEEVNNCHERAL 91          
BLAST of mRNA_Ecto-sp9_F_contig8787.16967.1 vs.
Match: Uncharacterized (protein n=1 Tax=Lithobates catesbeianus TaxID=8400 RepID=A0A2G9SJ12_LITCT)

HSP 1 Score: 97.1 bits (240), Expect = 4.940e-24
Identity = 47/88 (53.41%), Postives = 62/88 (70.45%), Query Frame = 0
Query:   20 LENEKDIEFEEEISRNPYRLKSWWRYLLAKEGAKRKTRNIIHERALKFLPNSYKLWNQYLRERRAAVEGKCITDPACQIVVNAHERAL 107
            +  E D+++EEEI RNPY +K W RY+  K+ A     N+I+ERALK LP SYKLW  YL++RR  V+ +C+TDPA + V N HERAL
Sbjct:    5 MAEEDDLQYEEEILRNPYSVKCWMRYIEFKQSASAHALNLIYERALKELPGSYKLWYAYLKQRRKQVKRRCLTDPAFEEVNNCHERAL 92          
BLAST of mRNA_Ecto-sp9_F_contig8787.16967.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pangasianodon hypophthalmus TaxID=310915 RepID=A0A5N5KK47_PANHP)

HSP 1 Score: 104 bits (260), Expect = 6.190e-24
Identity = 55/100 (55.00%), Postives = 69/100 (69.00%), Query Frame = 0
Query:    8 PASSLGQDIKEFLENEKDIEFEEEISRNPYRLKSWWRYLLAKEGAKRKTRNIIHERALKFLPNSYKLWNQYLRERRAAVEGKCITDPACQIVVNAHERAL 107
            P S+  QD+   +  E D+ +EEEI RNPY +K W RY+  K+ A +   N+I+ERALK LP SYKLW  YLRERR  ++GKCITDPA + V N HERAL
Sbjct:    2 PVSTGKQDV---VFEEDDLPYEEEIIRNPYSVKCWMRYIEHKQNAPKSVLNMIYERALKELPGSYKLWYNYLRERRKQIKGKCITDPAYEEVNNCHERAL 98          
BLAST of mRNA_Ecto-sp9_F_contig8787.16967.1 vs.
Match: XPA (binding protein 2 n=1 Tax=Sinocyclocheilus rhinocerous TaxID=307959 RepID=A0A673G278_9TELE)

HSP 1 Score: 103 bits (258), Expect = 8.210e-24
Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = 0
Query:   18 EFLENEKDIEFEEEISRNPYRLKSWWRYLLAKEGAKRKTRNIIHERALKFLPNSYKLWNQYLRERRAAVEGKCITDPACQIVVNAHERAL 107
            + L  + D+ +EEEI RNPY +K W RY+  K+ A++   N+I+ERALK LP SYKLW  YLRERR  V+GKC+TDPA + V N HERAL
Sbjct:    9 DVLFEDDDLPYEEEIIRNPYSVKCWMRYIEHKQNAQKSVLNMIYERALKELPGSYKLWYNYLRERRKQVKGKCVTDPAYEEVNNCHERAL 98          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8787.16967.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized3.320e-65100.00protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Hypothetical3.150e-3465.59protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
Uncharacterized7.200e-3463.37protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
XAB25.660e-2559.04(Fragment) n=1 Tax=Kryptolebias marmoratus TaxID=3... [more]
SYF19.180e-2560.24(Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=18... [more]
Pre-mRNA-splicing1.530e-2454.12factor SYF1-like n=2 Tax=Alligator mississippiensi... [more]
XPA3.140e-2457.95binding protein 2 n=1 Tax=Sinocyclocheilus grahami... [more]
Uncharacterized4.940e-2453.41protein n=1 Tax=Lithobates catesbeianus TaxID=8400... [more]
Uncharacterized6.190e-2455.00protein n=1 Tax=Pangasianodon hypophthalmus TaxID=... [more]
XPA8.210e-2456.67binding protein 2 n=1 Tax=Sinocyclocheilus rhinoce... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 28..107
e-value: 1.6E-7
score: 33.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 29..80
NoneNo IPR availablePANTHERPTHR11246:SF21coord: 20..107
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 20..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8787contigEcto-sp9_F_contig8787:4546..5730 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8787.16967.1mRNA_Ecto-sp9_F_contig8787.16967.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8787 4094..5730 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8787.16967.1 ID=prot_Ecto-sp9_F_contig8787.16967.1|Name=mRNA_Ecto-sp9_F_contig8787.16967.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=107bp
MASSSAPPASSLGQDIKEFLENEKDIEFEEEISRNPYRLKSWWRYLLAKE
GAKRKTRNIIHERALKFLPNSYKLWNQYLRERRAAVEGKCITDPACQIVV
NAHERAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf