prot_Ecto-sp9_F_contig8774.16951.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8774.16951.1
Unique Nameprot_Ecto-sp9_F_contig8774.16951.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length147
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8774.16951.1 vs.
Match: SET (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQS4_9PHAE)

HSP 1 Score: 273 bits (698), Expect = 1.380e-90
Identity = 135/144 (93.75%), Postives = 136/144 (94.44%), Query Frame = 0 
Query:    1 ELCVVAVEDVPAGSQLFISYVDILQPWPVRQDLLRCHFFFECACPRCCRSPPAPPRRAVRSARSKTGGSGSGTADPCSGGGYSSDTIYGDSRDREEMVSGAWVCPKRACCGNGRVLPPLSTAGRGGAAGGEAQLGGTQLGVRPH 144
            ELCVVAVEDVPAGSQLFISYVDILQPWPVRQDLLRCHFFFECACPRCCRSPPAPPRRAVRSA S+TGGSGSGTADPCSGGG S DTIYGD RDREEMVSGAWVCPKR CCG GRVLPPLSTAGRGGAAGGEAQLGGTQLGV  H
Sbjct:   57 ELCVVAVEDVPAGSQLFISYVDILQPWPVRQDLLRCHFFFECACPRCCRSPPAPPRRAVRSAGSRTGGSGSGTADPCSGGGCSIDTIYGDIRDREEMVSGAWVCPKRGCCGKGRVLPPLSTAGRGGAAGGEAQLGGTQLGVWRH 200
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BLAST of mRNA_Ecto-sp9_F_contig8774.16951.1 vs.
Match: SET (and MYND domain containing 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR7_ECTSI)

HSP 1 Score: 280 bits (717), Expect = 4.560e-89
Identity = 139/147 (94.56%), Postives = 140/147 (95.24%), Query Frame = 0 
Query:    1 ELCVVAVEDVPAGSQLFISYVDILQPWPVRQDLLRCHFFFECACPRCCRSPPAPPRRAVRSARSKTGGSGSGTADPCSGGGYSSDTIYGDSRDREEMVSGAWVCPKRACCGNGRVLPPLSTAGRGGAAGGEAQLGGTQLGVRPHGWG 147
            ELCVVAVEDVPAGSQLFISYVDILQPWPVRQDLLRCHFFFECACPRCCRSPPAPPRRAVRSARSKTGGSGS TADPCSGGGYSSDTIYG+SRDREEMVSGAWVCPKRACCGNGRVLPPLSTAGRGGAAGGEAQL      VRPHGWG
Sbjct:  256 ELCVVAVEDVPAGSQLFISYVDILQPWPVRQDLLRCHFFFECACPRCCRSPPAPPRRAVRSARSKTGGSGSDTADPCSGGGYSSDTIYGESRDREEMVSGAWVCPKRACCGNGRVLPPLSTAGRGGAAGGEAQLE-----VRPHGWG 397
[Close]
BLAST of mRNA_Ecto-sp9_F_contig8774.16951.1 vs.
Match: MYND-type (zinc finger protein samB n=1 Tax=Aspergillus ellipticus CBS 707.79 TaxID=1448320 RepID=A0A319DF21_9EURO)

HSP 1 Score: 53.1 bits (126), Expect = 2.450e-5
Identity = 22/47 (46.81%), Postives = 31/47 (65.96%), Query Frame = 0 
Query:    1 ELCVVAVEDVPAGSQLFISYVDILQPWPVRQDLLRCHFFFECACPRC 47
            EL + A+  +P G Q+FISY+D   P+PVRQ  LR  ++F C C +C
Sbjct:  223 ELYIKALRPIPKGDQIFISYIDATNPYPVRQTELRERYYFTCKCTKC 269
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8774.16951.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
SET1.380e-9093.75domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
SET4.560e-8994.56and MYND domain containing 3 n=1 Tax=Ectocarpus si... [more]
MYND-type2.450e-546.81zinc finger protein samB n=1 Tax=Aspergillus ellip... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.170.270.10coord: 1..51
e-value: 1.9E-13
score: 52.2
NoneNo IPR availablePANTHERPTHR12197SET AND MYND DOMAIN CONTAININGcoord: 2..102
NoneNo IPR availableSUPERFAMILY82199SET domaincoord: 2..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8774contigEcto-sp9_F_contig8774:2825..3728 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8774.16951.1mRNA_Ecto-sp9_F_contig8774.16951.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8774 2824..3728 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8774.16951.1 ID=prot_Ecto-sp9_F_contig8774.16951.1|Name=mRNA_Ecto-sp9_F_contig8774.16951.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=147bp
ELCVVAVEDVPAGSQLFISYVDILQPWPVRQDLLRCHFFFECACPRCCRS
PPAPPRRAVRSARSKTGGSGSGTADPCSGGGYSSDTIYGDSRDREEMVSG
AWVCPKRACCGNGRVLPPLSTAGRGGAAGGEAQLGGTQLGVRPHGWG
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