prot_Ecto-sp9_F_contig8751.16932.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8751.16932.1
Unique Nameprot_Ecto-sp9_F_contig8751.16932.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length188
Homology
BLAST of mRNA_Ecto-sp9_F_contig8751.16932.1 vs.
Match: Golgi (apparatus membrane protein TVP23 homolog n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM82_9PHAE)

HSP 1 Score: 336 bits (862), Expect = 1.600e-113
Identity = 180/187 (96.26%), Postives = 183/187 (97.86%), Query Frame = 0
Query:    1 MGNFKFVSSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADAKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFSMFGGDQAQQGXXXXXXXXXNNGPGMNNV 187
            MGNFKFVSSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNV  DGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNAD+KVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFSMFGGDQAQQG XXXXXXX +NGPG+NNV
Sbjct:  181 MGNFKFVSSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVTADGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADSKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFSMFGGDQAQQGGXXXXXXXSSNGPGINNV 367          
BLAST of mRNA_Ecto-sp9_F_contig8751.16932.1 vs.
Match: Golgi (apparatus membrane protein TVP23 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV24_ECTSI)

HSP 1 Score: 324 bits (830), Expect = 5.670e-111
Identity = 184/210 (87.62%), Postives = 184/210 (87.62%), Query Frame = 0
Query:    1 MGNFKFVSSSSVMTYIICILMLAFDFWTVKNVSGRLM-----------------------VGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADAKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFSMFGGDQAQQGXXXXXXXXXNNGPGMNNV 187
            MGNFKFVSSSSVMTYIICILMLAFDFWTVKNVSGRLM                       VGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADAKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFSMFGGDQAQQGXXXXXXXXX  G GMNNV
Sbjct:    1 MGNFKFVSSSSVMTYIICILMLAFDFWTVKNVSGRLMRPGGVGGGWVGIETSRVESNAVQVGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADAKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFSMFGGDQAQQGXXXXXXXXXXXGSGMNNV 210          
BLAST of mRNA_Ecto-sp9_F_contig8751.16932.1 vs.
Match: Golgi (apparatus membrane protein TVP23 homolog n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0N0_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.750e-58
Identity = 92/156 (58.97%), Postives = 123/156 (78.85%), Query Frame = 0
Query:    8 SSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADAKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFSMFGG 163
            SS+ V  +++C+L LAFDFWTVKNVSGRL+VGLRWW+NVKEDGTTEW FESLEDM+E++SAD +LFW+G+YG P+ W+ + +  ++ L FQWL+IVV+AL L+GANI GY KC+ DA+ K++ MV D  + GAM    + LG+ G+RNALF +  G
Sbjct:   40 SSNFVFIFVLCVLCLAFDFWTVKNVSGRLLVGLRWWNNVKEDGTTEWRFESLEDMTEVSSADSRLFWLGMYGAPLAWLVVFIVDLLKLNFQWLIIVVVALTLNGANIVGYIKCSNDARQKLRFMVEDAGVKGAM----SVLGSAGVRNALFGLLAG 191          
BLAST of mRNA_Ecto-sp9_F_contig8751.16932.1 vs.
Match: Golgi (apparatus membrane protein TVP23 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0U0_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.950e-57
Identity = 96/157 (61.15%), Postives = 117/157 (74.52%), Query Frame = 0
Query:    7 VSSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADAKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFSMFGG 163
            +SS+ V+  +  IL+LAFDFWTVKN++GRLMVGLRWWSNVKEDGTT WVFESLE+MSEI  AD KLFWIGLY  P +WV L + G++    QWL+IVV+A+LLS ANI GYTKC+ DAK KV+  + DG MA        A+GN G RN +FS+  G
Sbjct:   80 ISSNFVLICVATILLLAFDFWTVKNITGRLMVGLRWWSNVKEDGTTSWVFESLENMSEIQPADSKLFWIGLYAAPAVWVALFIIGLLKFNLQWLIIVVVAILLSTANIVGYTKCSNDAKNKVRNFMQDGAMA--------AMGNAGFRNMMFSVLTG 228          
BLAST of mRNA_Ecto-sp9_F_contig8751.16932.1 vs.
Match: Golgi (apparatus membrane protein TVP23 homolog n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KG22_9STRA)

HSP 1 Score: 172 bits (435), Expect = 2.010e-50
Identity = 82/144 (56.94%), Postives = 109/144 (75.69%), Query Frame = 0
Query:    7 VSSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADAKVKVQQMVNDGMMAGAMQGAQAALGN 150
            +S S V  ++IC+L+LAFDFWTVKNVSGRL+VGLRWW+ + EDG+ EWVFESLEDMSEI+  D K+FW GLYG PV+WV  L+  ++ L  +W +I ++AL LSGAN+ GYTKC+ DAK K+Q M    M AGA++   ++ G+
Sbjct:   83 MSDSFVFVFVICVLLLAFDFWTVKNVSGRLLVGLRWWNRINEDGSNEWVFESLEDMSEIDPLDAKIFWTGLYGAPVVWVLFLLIAVLKLNVEWALIAIVALTLSGANVVGYTKCSKDAKNKMQSM----MTAGALEALNSSAGS 222          
BLAST of mRNA_Ecto-sp9_F_contig8751.16932.1 vs.
Match: Golgi (apparatus membrane protein TVP23 homolog n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1M0B7_HETAK)

HSP 1 Score: 171 bits (432), Expect = 4.380e-50
Identity = 82/156 (52.56%), Postives = 108/156 (69.23%), Query Frame = 0
Query:    8 SSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADAKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFSMFGG 163
            SS+ +  +++C+L+LA DFWTVKNV+GRL+VGLRWWS+V EDG T+WVFESLED+ E+++ D +LFW+GLY TP  W  L V G++    QWL++VV+AL LSGANI GYTKC  DAK K+Q  V  G+           + + G RN   S F G
Sbjct:   74 SSNFIFLFVLCVLLLAADFWTVKNVTGRLLVGLRWWSHVSEDGKTDWVFESLEDLGEVHAGDARLFWLGLYATPAAWAALFVIGLLKFNLQWLIVVVVALALSGANIIGYTKCRKDAKQKLQGFVESGVTG--------LMASEGFRNTFLSFFTG 221          
BLAST of mRNA_Ecto-sp9_F_contig8751.16932.1 vs.
Match: Golgi (apparatus membrane protein TVP23 homolog n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MG51_9STRA)

HSP 1 Score: 169 bits (427), Expect = 2.490e-49
Identity = 81/155 (52.26%), Postives = 118/155 (76.13%), Query Frame = 0
Query:    5 KFVSSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADAKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFS 159
             +V+++ +  ++ICI++LAFDFWTVKNVSGRL+VGLRWWS VK+DG+ EW+FESLEDM+EI+  D ++FW GLY +P+ W+ LL+ G + L+F++L +V+ AL+L+GANI GY KC++ AK K++ M+  GM     QG+ A L N  +RN + S
Sbjct:   69 SWVTTNFIFVFVICIVLLAFDFWTVKNVSGRLLVGLRWWSYVKDDGSNEWIFESLEDMAEISPVDSRMFWGGLYVSPLCWLFLLIVGFLRLQFEYLPLVIAALMLNGANILGYIKCSSSAKAKMESMMKQGMQ----QGSMAVLENNSVRNWVLS 219          
BLAST of mRNA_Ecto-sp9_F_contig8751.16932.1 vs.
Match: Golgi (apparatus membrane protein TVP23 homolog n=9 Tax=Aphanomyces TaxID=100860 RepID=A0A024TJ00_9STRA)

HSP 1 Score: 167 bits (424), Expect = 1.120e-48
Identity = 80/144 (55.56%), Postives = 106/144 (73.61%), Query Frame = 0
Query:    6 FVSSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADAKVKVQQMVNDGMMAGAMQGAQAALG 149
            FVS+S V  ++IC+L+LAFDFWTVKNVSGRL+VGLRWW+ + EDG+ +WVFESLEDMSEI+  D K+FW  LYG PV W   L+  ++ L  +W +I ++AL LSGAN+ GYTKC+ DAK K+  M    M AGA++   ++ G
Sbjct:   85 FVSNSFVFIFVICVLLLAFDFWTVKNVSGRLLVGLRWWNRINEDGSNDWVFESLEDMSEIDPLDAKIFWTALYGAPVAWALFLLVAVLKLNVEWALIAIVALTLSGANVVGYTKCSKDAKSKMHSM----MTAGALEALNSSAG 224          
BLAST of mRNA_Ecto-sp9_F_contig8751.16932.1 vs.
Match: Golgi (apparatus membrane protein TVP23 homolog n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Z9G7_SYMMI)

HSP 1 Score: 164 bits (416), Expect = 1.680e-48
Identity = 81/152 (53.29%), Postives = 115/152 (75.66%), Query Frame = 0
Query:    8 SSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADAKVKVQQMVNDGMMAGAMQGAQAALGNVGLRNALFS 159
            +S+ ++ +++CI++LAFDFWTVKNV+GRL+VGLRWWS V+EDG  EW+FESLEDM+E+++ D +LFW  LY TPV W  LL+ G++ LK ++L IV+ AL+LS ANI GY KC+  A+ KV+ ++ +G+     QG+ AAL N  LRN + S
Sbjct:    7 TSNFIVVFVVCIILLAFDFWTVKNVTGRLLVGLRWWSYVREDGGNEWIFESLEDMAEVSAFDSRLFWGALYVTPVFWTLLLLMGLLRLKIEYLPIVIAALMLSSANIMGYIKCSNSAQAKVRNLMENGIK----QGSMAALENSSLRNWILS 154          
BLAST of mRNA_Ecto-sp9_F_contig8751.16932.1 vs.
Match: Golgi (apparatus membrane protein TVP23 homolog n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XBB3_9STRA)

HSP 1 Score: 165 bits (418), Expect = 2.730e-48
Identity = 76/140 (54.29%), Postives = 106/140 (75.71%), Query Frame = 0
Query:    9 SSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDGTTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWLVIVVIALLLSGANIYGYTKCNADAKVKVQQMVNDGMMAGAMQGAQAAL 148
            SS V  +++CIL+LAFDFWTVKNV+GRL+VGLRWW+ + EDGT+EWVFES EDM+EI+  D ++FW GLYG+P LW+ LL+  ++    QW +IV++A+ LSGANI GYT+C  DAK K+Q +++ G +      A ++L
Sbjct:   51 SSYVFIFVVCILLLAFDFWTVKNVTGRLLVGLRWWNRINEDGTSEWVFESHEDMTEIDPLDSRVFWTGLYGSPALWMLLLIVAVLKFNVQWALIVLVAVALSGANIIGYTRCKKDAKQKMQSLMSQGALGAFSSSAGSSL 190          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8751.16932.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Golgi1.600e-11396.26apparatus membrane protein TVP23 homolog n=1 Tax=E... [more]
Golgi5.670e-11187.62apparatus membrane protein TVP23 homolog n=1 Tax=E... [more]
Golgi1.750e-5858.97apparatus membrane protein TVP23 homolog n=1 Tax=F... [more]
Golgi1.950e-5761.15apparatus membrane protein TVP23 homolog n=1 Tax=T... [more]
Golgi2.010e-5056.94apparatus membrane protein TVP23 homolog n=1 Tax=A... [more]
Golgi4.380e-5052.56apparatus membrane protein TVP23 homolog n=1 Tax=H... [more]
Golgi2.490e-4952.26apparatus membrane protein TVP23 homolog n=1 Tax=S... [more]
Golgi1.120e-4855.56apparatus membrane protein TVP23 homolog n=9 Tax=A... [more]
Golgi1.680e-4853.29apparatus membrane protein TVP23 homolog n=1 Tax=S... [more]
Golgi2.730e-4854.29apparatus membrane protein TVP23 homolog n=1 Tax=N... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008564Golgi apparatus membrane protein TVP23-likePFAMPF05832DUF846coord: 5..120
e-value: 8.8E-43
score: 145.7
IPR008564Golgi apparatus membrane protein TVP23-likePANTHERPTHR13019UNCHARACTERIZEDcoord: 5..142
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 94..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..117
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..93
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 118..187
NoneNo IPR availableTMHMMTMhelixcoord: 98..117
NoneNo IPR availableTMHMMTMhelixcoord: 72..94
NoneNo IPR availableTMHMMTMhelixcoord: 10..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8751contigEcto-sp9_F_contig8751:171..2311 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8751.16932.1mRNA_Ecto-sp9_F_contig8751.16932.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8751 171..2311 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8751.16932.1 ID=prot_Ecto-sp9_F_contig8751.16932.1|Name=mRNA_Ecto-sp9_F_contig8751.16932.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=188bp
MGNFKFVSSSSVMTYIICILMLAFDFWTVKNVSGRLMVGLRWWSNVKEDG
TTEWVFESLEDMSEINSADYKLFWIGLYGTPVLWVCLLVTGIMLLKFQWL
VIVVIALLLSGANIYGYTKCNADAKVKVQQMVNDGMMAGAMQGAQAALGN
VGLRNALFSMFGGDQAQQGGGRGGASSSNNGPGMNNV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008564TVP23-like