prot_Ecto-sp9_F_contig8746.16926.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8746.16926.1
Unique Nameprot_Ecto-sp9_F_contig8746.16926.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length108
Homology
BLAST of mRNA_Ecto-sp9_F_contig8746.16926.1 vs.
Match: WD (repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB06_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 7.950e-66
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0
Query:    3 GIMLEYELRDRSREMKEIDLLHLSPESDVDVLVNQIVFEEPLISENRKPQLRRLVHKLIEKLETNECDDFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV 108
            GIMLEYELRDRSREMKEIDLLHLSPESDVDVLVNQIVFEEPLISENRKPQLRRLVHKLIEKLETNECDDFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCK 
Sbjct:   14 GIMLEYELRDRSREMKEIDLLHLSPESDVDVLVNQIVFEEPLISENRKPQLRRLVHKLIEKLETNECDDFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKT 119          
BLAST of mRNA_Ecto-sp9_F_contig8746.16926.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT19_9STRA)

HSP 1 Score: 196 bits (498), Expect = 2.610e-59
Identity = 94/106 (88.68%), Postives = 104/106 (98.11%), Query Frame = 0
Query:    3 GIMLEYELRDRSREMKEIDLLHLSPESDVDVLVNQIVFEEPLISENRKPQLRRLVHKLIEKLETNECDDFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV 108
            GI+LEYELRD++REMKEIDLLHL+PE+DVDVLVNQ+VFEEPLISENRKPQLRRL++KLIEKLE +E +DFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV
Sbjct:   14 GIILEYELRDKTREMKEIDLLHLTPETDVDVLVNQVVFEEPLISENRKPQLRRLIYKLIEKLENHEANDFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV 119          
BLAST of mRNA_Ecto-sp9_F_contig8746.16926.1 vs.
Match: Wd (domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AP24_PLAHL)

HSP 1 Score: 184 bits (467), Expect = 1.260e-57
Identity = 89/106 (83.96%), Postives = 101/106 (95.28%), Query Frame = 0
Query:    3 GIMLEYELRDRSREMKEIDLLHLSPESDVDVLVNQIVFEEPLISENRKPQLRRLVHKLIEKLETNECDDFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV 108
            GI+LEYELRD +REMKEIDLLHL+ ESD++VL+NQIV EEPLIS++RKPQLRRL++KLIEKLE N+ +DFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV
Sbjct:   14 GIILEYELRDGTREMKEIDLLHLNAESDIEVLINQIVSEEPLISDSRKPQLRRLLYKLIEKLEVNDSNDFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV 119          
BLAST of mRNA_Ecto-sp9_F_contig8746.16926.1 vs.
Match: WD (domaincontaining protein putative n=25 Tax=Oomycota TaxID=4762 RepID=F0WZ26_9STRA)

HSP 1 Score: 191 bits (485), Expect = 2.240e-57
Identity = 93/106 (87.74%), Postives = 102/106 (96.23%), Query Frame = 0
Query:    3 GIMLEYELRDRSREMKEIDLLHLSPESDVDVLVNQIVFEEPLISENRKPQLRRLVHKLIEKLETNECDDFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV 108
            GI+LEYELRD +REMKEIDLLHL+ ESD+DVLVNQIVFEEPL+SE+RKPQLRRL++KLIEKLE NE +DFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV
Sbjct:   14 GIILEYELRDGTREMKEIDLLHLTAESDIDVLVNQIVFEEPLLSESRKPQLRRLIYKLIEKLEINESNDFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV 119          
BLAST of mRNA_Ecto-sp9_F_contig8746.16926.1 vs.
Match: Uncharacterized (protein n=5 Tax=Oomycota TaxID=4762 RepID=A0A024GRH3_9STRA)

HSP 1 Score: 191 bits (485), Expect = 2.240e-57
Identity = 93/106 (87.74%), Postives = 102/106 (96.23%), Query Frame = 0
Query:    3 GIMLEYELRDRSREMKEIDLLHLSPESDVDVLVNQIVFEEPLISENRKPQLRRLVHKLIEKLETNECDDFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV 108
            GI+LEYELRD +REMKEIDLLHL+ ESD+DVLVNQIVFEEPL+SE+RKPQLRRL++KLIEKLE NE +DFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV
Sbjct:   14 GIILEYELRDGTREMKEIDLLHLTAESDIDVLVNQIVFEEPLLSESRKPQLRRLIYKLIEKLEINESNDFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV 119          
BLAST of mRNA_Ecto-sp9_F_contig8746.16926.1 vs.
Match: Uncharacterized (protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2HVY0_PHYPR)

HSP 1 Score: 189 bits (481), Expect = 8.890e-57
Identity = 92/106 (86.79%), Postives = 102/106 (96.23%), Query Frame = 0
Query:    3 GIMLEYELRDRSREMKEIDLLHLSPESDVDVLVNQIVFEEPLISENRKPQLRRLVHKLIEKLETNECDDFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV 108
            GI+LEYELRD +REMKEIDLLHL+ ESD++VLVNQIVFEEPLISE+RKPQLRRL++KLIEKLE N+ +DFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV
Sbjct:   14 GIILEYELRDGTREMKEIDLLHLTAESDIEVLVNQIVFEEPLISESRKPQLRRLIYKLIEKLEVNDSNDFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV 119          
BLAST of mRNA_Ecto-sp9_F_contig8746.16926.1 vs.
Match: Hypothetical (protein n=3 Tax=Pinguiochrysidaceae TaxID=1004268 RepID=A0A7R9U295_9STRA)

HSP 1 Score: 187 bits (474), Expect = 9.870e-56
Identity = 91/106 (85.85%), Postives = 99/106 (93.40%), Query Frame = 0
Query:    3 GIMLEYELRDRSREMKEIDLLHLSPESDVDVLVNQIVFEEPLISENRKPQLRRLVHKLIEKLETNECDDFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV 108
            GI+LEYELRDRSRE KEIDLLHL+ E+D++VLVNQIVFEEPL+SENRKPQLRRL++KLIEK ET    DFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV
Sbjct:   14 GIILEYELRDRSREHKEIDLLHLTQETDIEVLVNQIVFEEPLVSENRKPQLRRLIYKLIEKQETQTSSDFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV 119          
BLAST of mRNA_Ecto-sp9_F_contig8746.16926.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ochrophyta TaxID=2696291 RepID=F0YJL8_AURAN)

HSP 1 Score: 187 bits (475), Expect = 1.350e-55
Identity = 87/106 (82.08%), Postives = 101/106 (95.28%), Query Frame = 0
Query:    3 GIMLEYELRDRSREMKEIDLLHLSPESDVDVLVNQIVFEEPLISENRKPQLRRLVHKLIEKLETNECDDFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV 108
            G++LEYE+RD++RE KEIDLLHL+PE+DV+VLVNQ+ FEEPLISENRKPQLRRL++KLIEKLE+NE  D+YLFKILRAHILPLTNCAFNK GDKFITGSYDRTCK+
Sbjct:   14 GVILEYEMRDKTRETKEIDLLHLTPETDVEVLVNQVTFEEPLISENRKPQLRRLIYKLIEKLESNENSDYYLFKILRAHILPLTNCAFNKQGDKFITGSYDRTCKI 119          
BLAST of mRNA_Ecto-sp9_F_contig8746.16926.1 vs.
Match: Hypothetical (protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MF66_9STRA)

HSP 1 Score: 185 bits (469), Expect = 5.500e-55
Identity = 86/106 (81.13%), Postives = 101/106 (95.28%), Query Frame = 0
Query:    3 GIMLEYELRDRSREMKEIDLLHLSPESDVDVLVNQIVFEEPLISENRKPQLRRLVHKLIEKLETNECDDFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV 108
            G++LEYELRD +RE+KEIDLLHL+P++D++V+VNQIVFEEPLISE++KP LRRL++KLIEKLE NE  DF+LFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV
Sbjct:   14 GVILEYELRDHTRELKEIDLLHLTPDTDIEVIVNQIVFEEPLISESKKPHLRRLIYKLIEKLENNESSDFFLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV 119          
BLAST of mRNA_Ecto-sp9_F_contig8746.16926.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WUJ8_9STRA)

HSP 1 Score: 185 bits (470), Expect = 5.620e-55
Identity = 87/106 (82.08%), Postives = 100/106 (94.34%), Query Frame = 0
Query:    3 GIMLEYELRDRSREMKEIDLLHLSPESDVDVLVNQIVFEEPLISENRKPQLRRLVHKLIEKLETNECDDFYLFKILRAHILPLTNCAFNKSGDKFITGSYDRTCKV 108
            G++LEYELRD++RE KEIDLLHL+PE+DV VLVNQI FEEPLISE+RKPQLRRL++KLIEKLE+N+  D+YLFKILRAHILPLTNCAFNK GDKFITGSYDRTCK+
Sbjct:   14 GVILEYELRDKNRETKEIDLLHLTPETDVQVLVNQITFEEPLISESRKPQLRRLIYKLIEKLESNDSSDYYLFKILRAHILPLTNCAFNKQGDKFITGSYDRTCKI 119          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8746.16926.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
WD7.950e-6699.06repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID... [more]
Hypothetical2.610e-5988.68protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Wd1.260e-5783.96domain-containing protein n=1 Tax=Plasmopara halst... [more]
WD2.240e-5787.74domaincontaining protein putative n=25 Tax=Oomycot... [more]
Uncharacterized2.240e-5787.74protein n=5 Tax=Oomycota TaxID=4762 RepID=A0A024GR... [more]
Uncharacterized8.890e-5786.79protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2H... [more]
Hypothetical9.870e-5685.85protein n=3 Tax=Pinguiochrysidaceae TaxID=1004268 ... [more]
Uncharacterized1.350e-5582.08protein n=2 Tax=Ochrophyta TaxID=2696291 RepID=F0Y... [more]
Hypothetical5.500e-5581.13protein n=1 Tax=Spumella elongata TaxID=89044 RepI... [more]
Hypothetical5.620e-5582.08protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR44156FAMILY NOT NAMEDcoord: 2..108
NoneNo IPR availablePANTHERPTHR44156:SF1DYNEIN ASSEMBLY FACTOR WITH WDR REPEAT DOMAINS 1coord: 2..108
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 78..108
score: 8.677
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 78..108
score: 8.637
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 73..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8746contigEcto-sp9_F_contig8746:413..1632 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8746.16926.1mRNA_Ecto-sp9_F_contig8746.16926.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8746 413..1632 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8746.16926.1 ID=prot_Ecto-sp9_F_contig8746.16926.1|Name=mRNA_Ecto-sp9_F_contig8746.16926.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=108bp
MVGIMLEYELRDRSREMKEIDLLHLSPESDVDVLVNQIVFEEPLISENRK
PQLRRLVHKLIEKLETNECDDFYLFKILRAHILPLTNCAFNKSGDKFITG
SYDRTCKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017986WD40_repeat_dom
IPR001680WD40_repeat
IPR036322WD40_repeat_dom_sf