prot_Ecto-sp9_F_contig8738.16920.1 (polypeptide) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig8738.16920.1 vs.
Match: PseudoU_synth_1 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX6_9PHAE) HSP 1 Score: 318 bits (816), Expect = 5.310e-101 Identity = 167/181 (92.27%), Postives = 170/181 (93.92%), Query Frame = 0
Query: 1 MAPDGPLLLHGCRFRSLNFQYTPENLYCLQEHLESLWEDAAITAARLLNNLEYLAGVTVSAKDLEAFAAFKRALKGSNDQHYSVVDHGEQGRRREKELKXXXXXX----GTGDSQGTRPGEEPAGGGGDEDMTWREGLRRLRNMGLGVGQVLGRKGHMPMERRQQGLHYNELVEGLGGKKR 177
MAPDGPLLLHGCRFRSLNFQYTPENLYCLQEHLESLWEDAAITAARLLNNLEYLAGVT+SAKDL+AFAAFK ALKGSNDQHYSVVDHGEQGRRREK XXXXXX GTGDSQGTRPGEE AG GGDE+MTWREGLRRLR MGLGVGQVLGRKGHMPMERRQQGLHYNELVEGLGGKKR
Sbjct: 549 MAPDGPLLLHGCRFRSLNFQYTPENLYCLQEHLESLWEDAAITAARLLNNLEYLAGVTISAKDLDAFAAFKHALKGSNDQHYSVVDHGEQGRRREKXXXXXXXXXXXXGGTGDSQGTRPGEETAGRGGDENMTWREGLRRLRGMGLGVGQVLGRKGHMPMERRQQGLHYNELVEGLGGKKR 729
BLAST of mRNA_Ecto-sp9_F_contig8738.16920.1 vs.
Match: tRNA (pseudouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHT9_ECTSI) HSP 1 Score: 278 bits (711), Expect = 5.910e-92 Identity = 142/177 (80.23%), Postives = 145/177 (81.92%), Query Frame = 0
Query: 1 MAPDGPLLLHGCRFRSLNFQYTPENLYCLQEHLESLWEDAAITAARLLNNLEYLAGVTVSAKDLEAFAAFKRALKGSNDQHYSVVDHGEQGRRREKELKXXXXXXGTGDSQGTRPGEEPAGGGGDEDMTWREGLRRLRNMGLGVGQVLGRKGHMPMERRQQGLHYNELVEGLGGKKR 177
MAPDGPLLLHGCRFRSLNFQYTPENLYCLQEHLESLWEDAAITAARLLNNLEYLAGVTVSAKDL+AFAAFKRALKGSNDQHYSVVDHGEQGRR +DMTWREGLRRLR+MGLGVGQVLGRKGHMPMERRQQGLHYNELVEGLGGKKR
Sbjct: 39 MAPDGPLLLHGCRFRSLNFQYTPENLYCLQEHLESLWEDAAITAARLLNNLEYLAGVTVSAKDLDAFAAFKRALKGSNDQHYSVVDHGEQGRR--------------------------------QDMTWREGLRRLRDMGLGVGQVLGRKGHMPMERRQQGLHYNELVEGLGGKKR 183
BLAST of mRNA_Ecto-sp9_F_contig8738.16920.1 vs.
Match: tRNA (pseudouridine synthase (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UF07_9STRA) HSP 1 Score: 54.3 bits (129), Expect = 3.490e-5 Identity = 47/186 (25.27%), Postives = 81/186 (43.55%), Query Frame = 0
Query: 1 MAPDGPLLLHGCRFRSLNFQYTPENLYCLQEHLESLWEDAAITAARLLNNLEYLAG-VTVSAKDLEAFAAFKRALKGSNDQHYSVVDHGEQGRRREKELKXXXXXXGTGDSQGTRPGEEPAGGGGDEDMT-------WREGLRRL------RNMGLGVGQVLGRKGHMPMERRQQGLHYNELVEGL 172
MAP+ PL+LHGC ++++ F ++ +NL+ + E WE+ ++ + R+L + LA V+ D+ +F EQ R++EK LK PG++ + D +M W E L R+ R G ++L H+P+ R +G Y E V+ +
Sbjct: 70 MAPELPLVLHGCGYQNVTFGFSVKNLWAMSCDFERQWEEQSLASERILGAISSLATEAQVTEGDINSFITLAT----------------EQRRKKEKRLKTKP------------PGKQSSSTRMDANMLSDKTVIPWGEALSRIESALCIRPSPSGPKEIL----HVPLMERSRGTTYEEKVQSI 223 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8738.16920.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp9_F_contig8738.16920.1 ID=prot_Ecto-sp9_F_contig8738.16920.1|Name=mRNA_Ecto-sp9_F_contig8738.16920.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=236bpback to top |