prot_Ecto-sp9_F_contig8732.16918.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig8732.16918.1
Unique Name	prot_Ecto-sp9_F_contig8732.16918.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	237

Homology

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BLAST of mRNA_Ecto-sp9_F_contig8732.16918.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ6_ECTSI)

HSP 1 Score: 413 bits (1061), Expect = 1.680e-129
Identity = 227/237 (95.78%), Postives = 228/237 (96.20%), Query Frame = 0

Query:    1 AVRRAVPSTAAEGIAWKNVLEVLEHLRDLQEQGEAGLLRDPAWKDGMERGICGLRDTVGRLREAVSKLSQNTAAQVEEMATLKANNKDIKWQTTTAQDLLKYEAGEGERREEGEDDGGGLDNGRDTLDADLVEIRKRIRENRSKIEAAKSDLNVTLKSRRERGPDVAINPAANGRSANGQSATRTPQGPPSRHAAAVTPASSQREAASPLPGYARSRAGGGGGGAHVRGGAIHGVLP 237
            AVRRAVPSTAAEGIAWKNVLEVLEHLRDLQ QGEAGLLRDPAWKDGMERGICGLRDTVGRLREAVSKLSQNTAAQVEEMATLKANNKDIKWQTTTAQDLLKYEAGEGERREEGEDDGGGLDNGRDTLDADLVEIRKRIRENRSKIEAAKSDLN TLKSRRERGPDVAINPAANGR AN QSATRTPQGPPSRHAA VTPASS+REAASPLPG ARSRAGGGG   HVRGGAIHGVLP
Sbjct: 1443 AVRRAVPSTAAEGIAWKNVLEVLEHLRDLQGQGEAGLLRDPAWKDGMERGICGLRDTVGRLREAVSKLSQNTAAQVEEMATLKANNKDIKWQTTTAQDLLKYEAGEGERREEGEDDGGGLDNGRDTLDADLVEIRKRIRENRSKIEAAKSDLNATLKSRRERGPDVAINPAANGRGANSQSATRTPQGPPSRHAA-VTPASSRREAASPLPGSARSRAGGGG---HVRGGAIHGVLP 1675

[Close]

BLAST of mRNA_Ecto-sp9_F_contig8732.16918.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBC0_9PHAE)

HSP 1 Score: 398 bits (1023), Expect = 2.460e-124
Identity = 222/238 (93.28%), Postives = 225/238 (94.54%), Query Frame = 0

Query:    1 AVRRAVPSTAAEGIAWKNVLEVLEHLRDLQEQGEAGLLRDPAWKDGMERGICGLRDTVGRLREAVSKLSQNTAAQVEEMATLKANNKDIKWQTTTAQDLLKY-EAGEGERREEGEDDGGGLDNGRDTLDADLVEIRKRIRENRSKIEAAKSDLNVTLKSRRERGPDVAINPAANGRSANGQSATRTPQGPPSRHAAAVTPASSQREAASPLPGYARSRAGGGGGGAHVRGGAIHGVLP 237
            AVRRAVPSTAAEGIAWKNVLEVLEHLRDL+EQGEAGLLRD AW DGMERGICGLRDTVGRLREAV+KLSQNTAAQVEEMATLKANNKDIKWQTTTAQDLLKY E GEGERREEGEDDGGGLDNGRDTLDADLVEIRKRIRENRSKIEAAKSDLN TLKSRRERGPDVAINPAANGRSA GQSATRT QGPPSRHAAA TPASS+REAASPLPG ARSRA GGG   HVRGGAIHGVLP
Sbjct: 1292 AVRRAVPSTAAEGIAWKNVLEVLEHLRDLREQGEAGLLRDSAWVDGMERGICGLRDTVGRLREAVNKLSQNTAAQVEEMATLKANNKDIKWQTTTAQDLLKYDETGEGERREEGEDDGGGLDNGRDTLDADLVEIRKRIRENRSKIEAAKSDLNATLKSRRERGPDVAINPAANGRSAIGQSATRTLQGPPSRHAAADTPASSRREAASPLPGSARSRAAGGG---HVRGGAIHGVLP 1526

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig8732.16918.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig8732.16918.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
Uncharacterized	1.680e-129	95.78	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
Uncharacterized	2.460e-124	93.28	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 131..151

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig8732	contig	Ecto-sp9_F_contig8732:2073..5608 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig8732.16918.1	mRNA_Ecto-sp9_F_contig8732.16918.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig8732 2073..5608 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig8732.16918.1 ID=prot_Ecto-sp9_F_contig8732.16918.1|Name=mRNA_Ecto-sp9_F_contig8732.16918.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=237bp
AVRRAVPSTAAEGIAWKNVLEVLEHLRDLQEQGEAGLLRDPAWKDGMERG
ICGLRDTVGRLREAVSKLSQNTAAQVEEMATLKANNKDIKWQTTTAQDLL
KYEAGEGERREEGEDDGGGLDNGRDTLDADLVEIRKRIRENRSKIEAAKS
DLNVTLKSRRERGPDVAINPAANGRSANGQSATRTPQGPPSRHAAAVTPA
SSQREAASPLPGYARSRAGGGGGGAHVRGGAIHGVLP