prot_Ecto-sp9_F_contig872.16902.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig872.16902.1
Unique Nameprot_Ecto-sp9_F_contig872.16902.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length342
Homology
BLAST of mRNA_Ecto-sp9_F_contig872.16902.1 vs.
Match: UBC (core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LBS4_9PHAE)

HSP 1 Score: 582 bits (1501), Expect = 1.810e-208
Identity = 307/341 (90.03%), Postives = 317/341 (92.96%), Query Frame = 0
Query:    1 MPVNIKNPAIKRIHADVRELMKDPSDQYHAAPLESNLFEWHFTIRGPPDTEFEGGVYHGRIILPPEYPFRPPDIMFNTPNGRFSTGMKICLTISSYHPEHWQPAWGIRLILEALISFFPSPSHGALGGLDWSAEERKRLAVESRKWKCYKCGLVADLLPELRPKGESGGASSRSSYADQIKELHKLKAKTADEVAAESPVAXXXXXXXXDDREPGTTVSESPSGKIASTKKEAEVIAQASGEKRGGISTISETTATTAPSSPRLRSGGGAPAERGGDPTPSPANARGASEVEGNQGQQXXXESREDDLGREDDVLSFVAVAIALAIVGILVRKALRLAEVI 341
            MPVNIKNPAIKRIHADVRELMKDPSDQYHAAPLESNLFEWHFTIRGPPDTEF+GGVYHGRIILPPEYPFRPPDIMFNTPNGRFSTGMKICLTISSYHPE+WQPAWGIRLILEALISFFPSPSHGALGGLDWSA ERKRLAVESR+WKCYKCG+VADLLPELRPKGESGGASSRS YADQIKELHKLKAKTADEVAAESPV    XXXX DDR+PGTT SESPSGKI STKKEAEVIAQASG+K GGI  IS+TTATTAPSSPRLRS GG PAE  G PTP+ ANARG SEVEG+ GQQ   ESRE+ LGREDDVLSFVAVAIALAIVGILVRKALRLAEVI
Sbjct:    1 MPVNIKNPAIKRIHADVRELMKDPSDQYHAAPLESNLFEWHFTIRGPPDTEFQGGVYHGRIILPPEYPFRPPDIMFNTPNGRFSTGMKICLTISSYHPEYWQPAWGIRLILEALISFFPSPSHGALGGLDWSAGERKRLAVESRQWKCYKCGVVADLLPELRPKGESGGASSRSIYADQIKELHKLKAKTADEVAAESPVTAAAXXXXSDDRDPGTTGSESPSGKIGSTKKEAEVIAQASGKKCGGIGAISKTTATTAPSSPRLRSVGGGPAEGRGGPTPAHANARGTSEVEGDGGQQQKQESREEYLGREDDVLSFVAVAIALAIVGILVRKALRLAEVI 341          
BLAST of mRNA_Ecto-sp9_F_contig872.16902.1 vs.
Match: Ubiquitin-conjugating (enzyme E2 J1 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=I2CR53_NANGC)

HSP 1 Score: 271 bits (692), Expect = 1.940e-85
Identity = 120/167 (71.86%), Postives = 140/167 (83.83%), Query Frame = 0
Query:    4 NIKNPAIKRIHADVRELMKDPSDQYHAAPLESNLFEWHFTIRGPPDTEFEGGVYHGRIILPPEYPFRPPDIMFNTPNGRFSTGMKICLTISSYHPEHWQPAWGIRLILEALISFFPSPSHGALGGLDWSAEERKRLAVESRKWKCYKCGLVADLLPELRPK-GESGG 169
            N+KNPAI+RIHAD+REL KDPSDQYHAAPLE NLFEWHFT+RGPP T+++ GVYHGRI+LP EYPF+PP+IM  TP+GRF  G KICL+IS++HPEHWQPAWG+RLILEALISFFP+   GA+G LDW+ EERKRLAVESR W C +CGL+  LLP L    GE  G
Sbjct:    9 NVKNPAIRRIHADIRELQKDPSDQYHAAPLEENLFEWHFTLRGPPATDYDAGVYHGRILLPAEYPFKPPNIMLLTPSGRFEIGKKICLSISAHHPEHWQPAWGVRLILEALISFFPTEPKGAVGSLDWTPEERKRLAVESRSWCCARCGLIKTLLPPLNTAVGEESG 175          
BLAST of mRNA_Ecto-sp9_F_contig872.16902.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CP11_PYTOL)

HSP 1 Score: 263 bits (673), Expect = 3.470e-83
Identity = 127/203 (62.56%), Postives = 157/203 (77.34%), Query Frame = 0
Query:    1 MPVNIKNPAIKRIHADVRELMKDPSDQYHAAPLESNLFEWHFTIRGPPDTEFEGGVYHGRIILPPEYPFRPPDIMFNTPNGRFSTGMKICLTISSYHPEHWQPAWGIRLILEALISFFPSPSHGALGGLDWSAEERKRLAVESRKWKCYKCGLVADLLPELRPKGESGGASSRSSYADQIKELH--KLKAK---TADEVAAES 198
            M  +++N AIKRI  DVRE+MKDPSDQY+AAPLE N+F+WHFT+RGPPDTEFEGG+YHGRI+LP +YPF+PP+IM  TPNGRF    KICL+IS++HPE WQPAWGIRLILEALISF P+   GA+G +D+  EERKRLA  S  + C  CG VA+LLPEL+ + E   AS  S YADQI +LH   L++K   +A++ A ES
Sbjct:    1 MASSVRNTAIKRIQGDVREMMKDPSDQYYAAPLEDNMFDWHFTLRGPPDTEFEGGIYHGRILLPADYPFKPPNIMLLTPNGRFEVRKKICLSISAHHPEEWQPAWGIRLILEALISFMPTKGEGAIGAIDYPPEERKRLAKLSCDYTCDVCGKVAELLPELKEEDEEN-ASKPSKYADQIAQLHMHSLESKPATSAEDTAQES 202          
BLAST of mRNA_Ecto-sp9_F_contig872.16902.1 vs.
Match: UBC (core domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=V9E9I6_PHYPR)

HSP 1 Score: 261 bits (666), Expect = 5.580e-82
Identity = 120/191 (62.83%), Postives = 146/191 (76.44%), Query Frame = 0
Query:    1 MPVNIKNPAIKRIHADVRELMKDPSDQYHAAPLESNLFEWHFTIRGPPDTEFEGGVYHGRIILPPEYPFRPPDIMFNTPNGRFSTGMKICLTISSYHPEHWQPAWGIRLILEALISFFPSPSHGALGGLDWSAEERKRLAVESRKWKCYKCGLVADLLPELRPKGESGGASSRSSYADQIKELHKLKAKTA 191
            M  +++N AIKRI  DVRE+M +PSDQY AAPLE+N+F+WHFT+RGP DTEFEGG+YHGRIILP +YPF+PP+IM  TPNGRF    KICL+IS+YHPE WQPAWG+RLILEALISF P+   GA+G LD+ AEER+RLA  S  +KC  CG VADLLPEL  + E       S YA+QI +LH    ++A
Sbjct:    1 MAASVRNTAIKRIQGDVREMMTNPSDQYAAAPLETNMFDWHFTLRGPRDTEFEGGIYHGRIILPSDYPFKPPNIMLLTPNGRFEVKKKICLSISAYHPEEWQPAWGVRLILEALISFMPTKGEGAIGALDFPAEERRRLAKLSVDYKCETCGRVADLLPELESENEEETEKKPSKYAEQIAQLHMHSLESA 191          
BLAST of mRNA_Ecto-sp9_F_contig872.16902.1 vs.
Match: Ubiquitin-conjugating (enzyme E2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YYG8_9STRA)

HSP 1 Score: 258 bits (660), Expect = 1.630e-81
Identity = 119/184 (64.67%), Postives = 144/184 (78.26%), Query Frame = 0
Query:    1 MPVNIKNPAIKRIHADVRELMKDPSDQYHAAPLESNLFEWHFTIRGPPDTEFEGGVYHGRIILPPEYPFRPPDIMFNTPNGRFSTGMKICLTISSYHPEHWQPAWGIRLILEALISFFPSPSHGALGGLDWSAEERKRLAVESRKWKCYKCGLVADLLPELRPKGESGGASSRSSYADQIKELH 184
            M  +I N AIKRI ADVRE+M DPSDQY+AAPLESN+F+WHFTIRGP DTEFEGG++HGRI+LP EYPF+PP+I+  TPNGRF    KICL+IS+YHPEHWQPAWG+RLILEALISF P+   GA+G LD++AEERK+LA ES  W C +CG + DL+PE   + +       S YA QI +LH
Sbjct:    1 MASSIGNTAIKRIRADVREMMTDPSDQYYAAPLESNMFDWHFTIRGPRDTEFEGGIFHGRILLPSEYPFKPPNIILLTPNGRFEVKKKICLSISAYHPEHWQPAWGVRLILEALISFMPTKGEGAIGALDFTAEERKKLAKESVVWSCPQCGSIKDLIPEETKRDKP----VESKYASQIAQLH 180          
BLAST of mRNA_Ecto-sp9_F_contig872.16902.1 vs.
Match: Ubiquitin-conjugating (enzyme n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833S8V9_PHYIN)

HSP 1 Score: 259 bits (662), Expect = 3.150e-81
Identity = 121/192 (63.02%), Postives = 147/192 (76.56%), Query Frame = 0
Query:    1 MPVNIKNPAIKRIHADVRELMKDPSDQYHAAPLESNLFEWHFTIRGPPDTEFEGGVYHGRIILPPEYPFRPPDIMFNTPNGRFSTGMKICLTISSYHPEHWQPAWGIRLILEALISFFPSPSHGALGGLDWSAEERKRLAVESRKWKCYKCGLVADLLPELRPKGESGGASSR-SSYADQIKELHKLKAKTA 191
            M  +++N AIKRI  DVRE+M +PSDQY AAPLE+N+F+WHFT+RGP DTEFEGG+YHGRIILP +YPF+PP+IM  TPNGRF    KICL+IS+YHPE WQPAWG+RLILEALISF P+   GA+G LD+ AEER+RLA  S  +KC  CG VADLLPEL  + E      + S YA+QI +LH    +TA
Sbjct:   11 MAASVRNTAIKRIQGDVREMMTNPSDQYAAAPLETNMFDWHFTLRGPRDTEFEGGIYHGRIILPSDYPFKPPNIMLLTPNGRFEVKKKICLSISAYHPEEWQPAWGVRLILEALISFMPTKGEGAIGALDFPAEERRRLAKLSVDYKCETCGRVADLLPELESEHEGNEEEKKPSKYAEQIAQLHMHSLETA 202          
BLAST of mRNA_Ecto-sp9_F_contig872.16902.1 vs.
Match: UBC (core domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EG94_BRELC)

HSP 1 Score: 258 bits (659), Expect = 1.460e-80
Identity = 119/185 (64.32%), Postives = 144/185 (77.84%), Query Frame = 0
Query:    1 MPVNIKNPAIKRIHADVRELMKDPSDQYHAAPLESNLFEWHFTIRGPPDTEFEGGVYHGRIILPPEYPFRPPDIMFNTPNGRFSTGMKICLTISSYHPEHWQPAWGIRLILEALISFFPSPSHGALGGLDWSAEERKRLAVESRKWKCYKCGLVADLLPELRPKGESGGASSR-SSYADQIKELH 184
            M   ++N AIKRI  DVRE+M +PSDQY AAPLE+N+F+WHFT+RGPPD+EFEGG+YHGRIILP +YPF+PP+IM  TPNGRF    KICL+IS+YHPE WQPAWG+RLILEALISF P+   GA+G LD+SA ER+RLA  S  +KC  CG VADLLPEL+   E      + S YA+QI +LH
Sbjct:    1 MVAGVRNTAIKRIQGDVREMMTNPSDQYDAAPLETNMFDWHFTLRGPPDSEFEGGIYHGRIILPSDYPFKPPNIMLLTPNGRFEVKKKICLSISAYHPEEWQPAWGVRLILEALISFMPTKGEGAIGALDFSAAERRRLAKLSVDFKCETCGRVADLLPELKAGNEEKEVEKKPSKYAEQIAQLH 185          
BLAST of mRNA_Ecto-sp9_F_contig872.16902.1 vs.
Match: UBC (core domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XT22_9STRA)

HSP 1 Score: 256 bits (655), Expect = 1.580e-80
Identity = 119/184 (64.67%), Postives = 141/184 (76.63%), Query Frame = 0
Query:    1 MPVNIKNPAIKRIHADVRELMKDPSDQYHAAPLESNLFEWHFTIRGPPDTEFEGGVYHGRIILPPEYPFRPPDIMFNTPNGRFSTGMKICLTISSYHPEHWQPAWGIRLILEALISFFPSPSHGALGGLDWSAEERKRLAVESRKWKCYKCGLVADLLPELRPKGESGGASSRSSYADQIKELH 184
            M  +I N AIKRI ADVRE+M DPSDQY A PLE N+F+WHFTIRGP DT FEGGVYHGRI+LP +YPF+PP+I+  TPNGRF    KICL+IS+YHPEHWQPAWG+RLILEALISF P+   GA+G LD++A+ERK LA ES  W C +CG V DL+PE +P+     A   S YA QI +LH
Sbjct:    1 MSGSIGNTAIKRIRADVREMMTDPSDQYFATPLEDNMFDWHFTIRGPRDTPFEGGVYHGRILLPADYPFKPPNIILLTPNGRFEVKKKICLSISAYHPEHWQPAWGVRLILEALISFMPTKGEGAIGALDFTADERKALAKESVNWSCPQCGSVKDLIPEEKPRDT---APVESKYASQIAQLH 181          
BLAST of mRNA_Ecto-sp9_F_contig872.16902.1 vs.
Match: Hypothetical (protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5J510_9STRA)

HSP 1 Score: 257 bits (656), Expect = 1.850e-80
Identity = 118/179 (65.92%), Postives = 138/179 (77.09%), Query Frame = 0
Query:    6 KNPAIKRIHADVRELMKDPSDQYHAAPLESNLFEWHFTIRGPPDTEFEGGVYHGRIILPPEYPFRPPDIMFNTPNGRFSTGMKICLTISSYHPEHWQPAWGIRLILEALISFFPSPSHGALGGLDWSAEERKRLAVESRKWKCYKCGLVADLLPELRPKGESGGASSRSSYADQIKELH 184
            K+P++KRI AD+REL  DPSDQY AAPLE N+FEWHFTIRGPPDTEFEGG YHGRI+LP +YPF+PPDI+F TPNGRF    K+CL+IS+YHPE WQPAWGIRLILEALISF P+P+ GA+G L WS  ERKRLA  S  + C  CG  ADLLP+L+     G  +  S Y D+I  LH
Sbjct:    3 KSPSLKRIQADMRELASDPSDQYCAAPLEDNMFEWHFTIRGPPDTEFEGGCYHGRILLPADYPFKPPDIIFLTPNGRFQVNTKVCLSISAYHPEFWQPAWGIRLILEALISFLPTPADGAIGSLSWSVPERKRLAKLSTSFHCMYCGNTADLLPKLK-----GSKNVGSKYKDEIANLH 176          
BLAST of mRNA_Ecto-sp9_F_contig872.16902.1 vs.
Match: UBC (core domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZHH9_9STRA)

HSP 1 Score: 257 bits (657), Expect = 1.960e-80
Identity = 122/198 (61.62%), Postives = 152/198 (76.77%), Query Frame = 0
Query:    1 MPVNIKNPAIKRIHADVRELMKDPSDQYHAAPLESNLFEWHFTIRGPPDTEFEGGVYHGRIILPPEYPFRPPDIMFNTPNGRFSTGMKICLTISSYHPEHWQPAWGIRLILEALISFFPSPSHGALGGLDWSAEERKRLAVESRKWKCYKCGLVADLLPELRPKGESGGASSR--SSYADQIKELHKLKAKTADEVAA 196
            M  +++N AIKRI  DVRE+M +PSDQY AAPLE+N+F+WHFT+RGP +TEFEGG+YHGRIILP +YPF+PP+IM  TPNGRF    KICL+IS+YHPE WQPAWG+RLILEALISF P+   GA+G LD+ AEERKRLA  S  +KC  CG VADLLPE+    E+GG + +  S YA+QI +LH    ++A   +A
Sbjct:    1 MAASVRNTAIKRIQGDVREMMTNPSDQYAAAPLETNMFDWHFTLRGPRNTEFEGGIYHGRIILPSDYPFKPPNIMLLTPNGRFEVKKKICLSISAYHPEEWQPAWGVRLILEALISFMPTKGEGAIGALDFPAEERKRLAKLSVDYKCETCGRVADLLPEVET--ENGGEAEKKPSKYAEQIAQLHMHNLESAPPASA 196          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig872.16902.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UBC1.810e-20890.03core domain-containing protein n=2 Tax=Ectocarpus ... [more]
Ubiquitin-conjugating1.940e-8571.86enzyme E2 J1 n=2 Tax=Nannochloropsis gaditana TaxI... [more]
Uncharacterized3.470e-8362.56protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
UBC5.580e-8262.83core domain-containing protein n=19 Tax=Phytophtho... [more]
Ubiquitin-conjugating1.630e-8164.67enzyme E2 n=1 Tax=Achlya hypogyna TaxID=1202772 Re... [more]
Ubiquitin-conjugating3.150e-8163.02enzyme n=2 Tax=Phytophthora infestans TaxID=4787 R... [more]
UBC1.460e-8064.32core domain-containing protein n=1 Tax=Bremia lact... [more]
UBC1.580e-8064.67core domain-containing protein n=1 Tax=Aphanomyces... [more]
Hypothetical1.850e-8065.92protein n=2 Tax=Corethron hystrix TaxID=216773 Rep... [more]
UBC1.960e-8061.62core domain-containing protein n=5 Tax=Phytophthor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 11..159
e-value: 8.5E-27
score: 105.0
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 6..228
NoneNo IPR availablePANTHERPTHR24068:SF168UBIQUITIN-CONJUGATING ENZYME E2 J1coord: 6..228
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 314..331
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..313
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 332..341
NoneNo IPR availableTMHMMTMhelixcoord: 314..331
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 12..122
e-value: 5.8E-20
score: 71.4
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 11..122
score: 24.179
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 3..196
e-value: 4.3E-60
score: 204.3
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 9..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig872contigEcto-sp9_F_contig872:1797..3983 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig872.16902.1mRNA_Ecto-sp9_F_contig872.16902.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig872 729..4191 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig872.16902.1 ID=prot_Ecto-sp9_F_contig872.16902.1|Name=mRNA_Ecto-sp9_F_contig872.16902.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=342bp
MPVNIKNPAIKRIHADVRELMKDPSDQYHAAPLESNLFEWHFTIRGPPDT
EFEGGVYHGRIILPPEYPFRPPDIMFNTPNGRFSTGMKICLTISSYHPEH
WQPAWGIRLILEALISFFPSPSHGALGGLDWSAEERKRLAVESRKWKCYK
CGLVADLLPELRPKGESGGASSRSSYADQIKELHKLKAKTADEVAAESPV
AAAAAAAASDDREPGTTVSESPSGKIASTKKEAEVIAQASGEKRGGISTI
SETTATTAPSSPRLRSGGGAPAERGGDPTPSPANARGASEVEGNQGQQQQ
QESREDDLGREDDVLSFVAVAIALAIVGILVRKALRLAEVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD