prot_Ecto-sp9_F_contig8714.16896.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8714.16896.1
Unique Nameprot_Ecto-sp9_F_contig8714.16896.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length76
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8714.16896.1 vs.
Match: Vacuolar (protein sorting-associated protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP20_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 6.550e-6
Identity = 27/28 (96.43%), Postives = 27/28 (96.43%), Query Frame = 0 
Query:    1 MQDLDLEDRLQESSKKRRVKTARSFVPD 28
            MQDLDLEDRLQESSKKRRVKT RSFVPD
Sbjct: 1741 MQDLDLEDRLQESSKKRRVKTERSFVPD 1768
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8714.16896.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Vacuolar6.550e-696.43protein sorting-associated protein, putative n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8714contigEcto-sp9_F_contig8714:4600..5305 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8714.16896.1mRNA_Ecto-sp9_F_contig8714.16896.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8714 4581..5305 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8714.16896.1 ID=prot_Ecto-sp9_F_contig8714.16896.1|Name=mRNA_Ecto-sp9_F_contig8714.16896.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=76bp
MQDLDLEDRLQESSKKRRVKTARSFVPDDGAAAVVVVGEEEGEEPKAMEE
EGVPSPPDSLPPTRDGGGSGGDEDGE
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