prot_Ecto-sp9_F_contig871.16894.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig871.16894.1
Unique Nameprot_Ecto-sp9_F_contig871.16894.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length382
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig871.16894.1 vs.
Match: ATP-dependent (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP0_9PHAE)

HSP 1 Score: 217 bits (552), Expect = 1.150e-59
Identity = 175/342 (51.17%), Postives = 188/342 (54.97%), Query Frame = 0 
Query:    2 DDSGWDAKRYYRLAGEEDGGGSDDSGQH-------------EMEGSSNGELDDAGFDARAPPAAGGGKRLPKKEVSMAAFGNEEDYWDRLERLEAESEGKTPPNSKVKPXXXXRSKAPPSSATSRASPPPLRKHFGKNLPRSALPAPPREFVAGDSQVSRQERQEQQRRRLKVRSVHQPVLPVSKRPRTTXXXXXXXXXXXXXXXTARPSTLDTNSTAVAGRSLAVVAVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPKRRGGEGSEAVADLLTQVFSSPTGGAGRNSSGGGSVKHPANTQGVTAGSRTSLRGSDPVALFSSSG 330
            DDSGWDAKRYYRLAG+EDGG SDDSGQ              EM+GSSNGELDDAG      P +                                     PP+          S    ++ T  +   P RK     + R        E V GDSQV RQERQEQQRRRLKVRSVHQPVLP++KRPRTT               T  P  LDT STAVAGRSLAVV+VEA     XXXXXXXXXXXXX                        SLPKRRG EGS AVADLL QVFSSPTGGAGRNS GGG VK PA TQG TAGSR+SLRGSDPVALFSS+G
Sbjct:  402 DDSGWDAKRYYRLAGQEDGGSSDDSGQARIGRCASIYLLIVEMQGSSNGELDDAGHAKHEYPPS-------------------------------------PPSETRNQCPWPLSATKRTTGTGWSGSRPRRKEKRLQIQR--------EVVVGDSQVPRQERQEQQRRRLKVRSVHQPVLPLNKRPRTTGSRCSNNSSSK----TVHPFRLDTYSTAVAGRSLAVVSVEARRKQPXXXXXXXXXXXXXGPAVEQNGRRAGDSATATAAAQSASLPKRRGDEGSGAVADLLAQVFSSPTGGAGRNSRGGGFVKQPAITQGATAGSRSSLRGSDPVALFSSNG 694
[Close]
BLAST of mRNA_Ecto-sp9_F_contig871.16894.1 vs.
Match: ATP-dependent (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK3_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 1.740e-5
Identity = 27/28 (96.43%), Postives = 27/28 (96.43%), Query Frame = 0 
Query:    1 QDDSGWDAKRYYRLAGEEDGGGSDDSGQ 28
            QDDSGWDAKRYYRLAGEEDGG SDDSGQ
Sbjct:  561 QDDSGWDAKRYYRLAGEEDGGSSDDSGQ 588
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig871.16894.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
ATP-dependent1.150e-5951.17DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
ATP-dependent1.740e-596.43DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig871contigEcto-sp9_F_contig871:10301..13575 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig871.16894.1mRNA_Ecto-sp9_F_contig871.16894.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig871 10301..13575 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig871.16894.1 ID=prot_Ecto-sp9_F_contig871.16894.1|Name=mRNA_Ecto-sp9_F_contig871.16894.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=382bp
QDDSGWDAKRYYRLAGEEDGGGSDDSGQHEMEGSSNGELDDAGFDARAPP
AAGGGKRLPKKEVSMAAFGNEEDYWDRLERLEAESEGKTPPNSKVKPKPK
PRSKAPPSSATSRASPPPLRKHFGKNLPRSALPAPPREFVAGDSQVSRQE
RQEQQRRRLKVRSVHQPVLPVSKRPRTTSSSSSSSSSNNSSSKTARPSTL
DTNSTAVAGRSLAVVAVEARRKQPQQQQPTAARHQQQGPAVEQNGRRAGD
SAAATAAAQSASLPKRRGGEGSEAVADLLTQVFSSPTGGAGRNSSGGGSV
KHPANTQGVTAGSRTSLRGSDPVALFSSSGSSGGRGVARTSSEAAKRPAS
VAQKPPAARRSGAGGSGGGGAVADLFAQMFSG
back to top