prot_Ecto-sp9_F_contig871.16893.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig871.16893.1
Unique Nameprot_Ecto-sp9_F_contig871.16893.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length263
Homology
BLAST of mRNA_Ecto-sp9_F_contig871.16893.1 vs.
Match: ATP-dependent (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK3_ECTSI)

HSP 1 Score: 489 bits (1259), Expect = 2.270e-166
Identity = 251/263 (95.44%), Postives = 255/263 (96.96%), Query Frame = 0
Query:    1 MDGGALEHLVGFLRERRGQSGIVYCHKRDTAEELAKALNRALRKESLLDGRKAFLAMPYHGKMSDHDRTEAQAKFMSGEVDVITGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRQQRASLKAVKAVDSVVAYCEKQGCRRKALLAHFGEVTGAPAAAAAAEQKKHGLATASAGSSKSNIVPTDICRGTCDWCGGERERIKTDLLTLAGARAGG 263
            MDGGALEHLVGFLRERRGQSGIVYCHKRDTAEELAKALNRALR+ESLLDG KAFLAMPYHGKMSDHDRTEAQAKFMSGEVDVI GSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKR++RASLKAVKAVDSVVAYCEKQGCRRKALLAHFGEV GAPAAAAAA QKK G ATASAGSSKS+ VPTDICRGTCDWCGGERERIKTDLL LAGARAGG
Sbjct:  269 MDGGALEHLVGFLRERRGQSGIVYCHKRDTAEELAKALNRALREESLLDGGKAFLAMPYHGKMSDHDRTEAQAKFMSGEVDVIAGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRRRRASLKAVKAVDSVVAYCEKQGCRRKALLAHFGEVPGAPAAAAAAGQKKRGPATASAGSSKSSFVPTDICRGTCDWCGGERERIKTDLLKLAGARAGG 531          
BLAST of mRNA_Ecto-sp9_F_contig871.16893.1 vs.
Match: ATP-dependent (DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP0_9PHAE)

HSP 1 Score: 480 bits (1235), Expect = 8.750e-162
Identity = 248/265 (93.58%), Postives = 252/265 (95.09%), Query Frame = 0
Query:    1 MDGGALEHLVGFLRERRGQSGIVYCHKRDTAEELAKALNRALRKESLLDGRKAFLAMPYHGKMSDHDRTEAQA--KFMSGEVDVITGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRQQRASLKAVKAVDSVVAYCEKQGCRRKALLAHFGEVTGAPAAAAAAEQKKHGLATASAGSSKSNIVPTDICRGTCDWCGGERERIKTDLLTLAGARAGG 263
            MDGGALEHLVGFLRER GQSGIVYCHKRDTAEELAKALNRALRKESLLDGRKAFLAMPYHGKMSDHDRTEAQA  KFMSGEVDVITGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETV LLAFLARKPRPLAG+EKGTE GRKRQ+RASLKAVKAVDSVVAYCEK GCRRKALLAHFGEVTGAPAAA    QKK GLAT+SAGS +SNIVPTDICRGTCDWCGGERERIKTDLL LAGARAGG
Sbjct:  107 MDGGALEHLVGFLRERSGQSGIVYCHKRDTAEELAKALNRALRKESLLDGRKAFLAMPYHGKMSDHDRTEAQARAKFMSGEVDVITGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVELLAFLARKPRPLAGEEKGTETGRKRQRRASLKAVKAVDSVVAYCEKLGCRRKALLAHFGEVTGAPAAAXXXXQKKRGLATSSAGSGRSNIVPTDICRGTCDWCGGERERIKTDLLKLAGARAGG 371          
BLAST of mRNA_Ecto-sp9_F_contig871.16893.1 vs.
Match: DNA (helicase n=67 Tax=Bacteria TaxID=2 RepID=A0A494VYP5_9SPHI)

HSP 1 Score: 150 bits (380), Expect = 6.830e-38
Identity = 83/194 (42.78%), Postives = 117/194 (60.31%), Query Frame = 0
Query:    6 LEHLVGFLRERRGQSGIVYCHKRDTAEELAKALNRALRKESLLDGRKAFLAMPYHGKMSDHDRTEAQAKFMSGEVDVITGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRQQRASLKAVKAVDSVVAYCEKQGCRRKALLAHFGE 199
            ++ +V F+R+ +G+SGIVYC  R   EE+A+ALN        L+G KA   +PYH  +    R + Q KF+  +VDVI  ++AFGMG+DK DVR+V+H D+PKSMEG YQE GRAGRDG + V V ++S + +  L     K +P++ +E GT+                +  V+ YCE   CRRK LL +FGE
Sbjct:  222 IKEIVKFVRQNQGKSGIVYCLSRKKVEEVAEALN--------LNGVKA---LPYHAGLDAKVRADTQDKFLMEDVDVIVATIAFGMGIDKPDVRYVIHHDVPKSMEGYYQETGRAGRDGGEGVCVAFYSEKDIDKLQKFM-KDKPVSEREIGTQI---------------LKEVIDYCESSVCRRKQLLHYFGE 388          
BLAST of mRNA_Ecto-sp9_F_contig871.16893.1 vs.
Match: ATP-dependent (DNA helicase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BN62_9STRA)

HSP 1 Score: 150 bits (379), Expect = 9.120e-38
Identity = 86/257 (33.46%), Postives = 130/257 (50.58%), Query Frame = 0
Query:    3 GGALEHLVGFLRERRGQ--------SGIVYCHKRDTAEELAKALNRALRKESLLDGRKAFLAMPYHGKMSDHDRTEAQAKFMSGEVDVITGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRQQRASLKAVKAVDSVVAYCEKQGCRRKALLAHFGEVTGAPAAAAAAEQKKHGLATASAGSSKSNIVPTDICRGTCDWCGGERERIKT 251
            GGA+  L+ F+R +  Q        +G+VY  +R    +LA+ ++RA    +++       A+PYH  + D  RTE Q ++ SG V+V+  ++AFGMG+D   VR+V+HW+L KS+EG YQE GRAGRDG +A S+VY+    + + +FL +K    +  + G E   K           A+D +  YC  QGCRR+ LL HFGE                              + T +C+ TCD+C      + T
Sbjct:  402 GGAIADLISFIRSQHRQCEVKNEPCTGVVYVFRRQDTSDLAQKISRACDDANII-------ALPYHAGLKDDLRTETQKRWTSGNVNVVVATIAFGMGIDLPHVRYVIHWNLAKSVEGFYQESGRAGRDGKQARSIVYYDLSDLQMYSFLNKKSFFGSNDQTGEERNHK-----------ALDEMSEYCVLQGCRRQYLLGHFGE-----------------------------SIKTSVCQKTCDYCKDPNATVST 611          
BLAST of mRNA_Ecto-sp9_F_contig871.16893.1 vs.
Match: Uncharacterized (protein n=1 Tax=Treponema sp. CETP13 TaxID=1908540 RepID=A0A1L8N0V0_9SPIR)

HSP 1 Score: 147 bits (370), Expect = 3.510e-37
Identity = 80/198 (40.40%), Postives = 113/198 (57.07%), Query Frame = 0
Query:    2 DGGALEHLVGFLRERRGQSGIVYCHKRDTAEELAKALNRALRKESLLDGRKAFLAMPYHGKMSDHDRTEAQAKFMSGEVDVITGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRQQRASLKAVKAVDSVVAYCEKQGCRRKALLAHFGE 199
            +GGA   +  FL E   +SGI+YC  R   +EL+  L R           K F  +PYH  +S   R + Q KF+ G+VD+I  +VAFGMG++KSDVRFV+H+DLPKS+E  YQE+GRAGRDG  A +++ ++      + F          ++ G E    ++Q         +  ++ YCE +GCRRK LLAHFGE
Sbjct:  220 EGGANLQVEQFLEEHMNESGIIYCFSRKQVDELSAYLKR-----------KHFFVLPYHAGLSSEKREKNQQKFICGKVDIIVATVAFGMGINKSDVRFVLHYDLPKSLEQYYQEIGRAGRDGKPAHALLLYTYADTRKINFFI-------DEKSGVEYDSAKEQ---------LRGMIEYCESKGCRRKVLLAHFGE 390          
BLAST of mRNA_Ecto-sp9_F_contig871.16893.1 vs.
Match: DNA (helicase n=1 Tax=Methanosarcinales archaeon TaxID=2250255 RepID=A0A662RIW7_9EURY)

HSP 1 Score: 149 bits (376), Expect = 3.710e-37
Identity = 79/198 (39.90%), Postives = 117/198 (59.09%), Query Frame = 0
Query:    5 ALEHLVGFLRERRGQSGIVYCHKRDTAEELAKALNRALRKESLLDGRKAFLAMPYHGKMSDHDRTEAQAKFMSGEVDVITGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRQQRASLKAVKAVDSVVAYCEKQGCRRKALLAHFGEVTG 202
            A + L+ +L+ R+  SGI+YCH R +A++LA  L +           + + A+PYH  +    RTE Q KF+  +V++I  +VAFGMG+DKS+VRFV+H+DLPK++E  YQE GRAGRDG ++  +++ SR  +G L++       +  KE  TE            A K +  +V +CE   CRRK LL +FGE  G
Sbjct:  242 AYDQLLQYLKGRKNDSGIIYCHSRKSADDLANKLKK-----------EGYRALPYHAGLKADLRTETQDKFIKDDVEIIVATVAFGMGIDKSNVRFVIHYDLPKNLETYYQETGRAGRDGEESDCIIFFSRSDMGKLSYF------IDQKEDETE---------KQNAYKKLRCMVDFCESGTCRRKILLEYFGETYG 413          
BLAST of mRNA_Ecto-sp9_F_contig871.16893.1 vs.
Match: DNA (helicase RecQ n=1 Tax=Pedobacter sp. SYSU D00535 TaxID=2810308 RepID=UPI001A979D67)

HSP 1 Score: 148 bits (373), Expect = 6.170e-37
Identity = 84/194 (43.30%), Postives = 116/194 (59.79%), Query Frame = 0
Query:    6 LEHLVGFLRERRGQSGIVYCHKRDTAEELAKALNRALRKESLLDGRKAFLAMPYHGKMSDHDRTEAQAKFMSGEVDVITGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRQQRASLKAVKAVDSVVAYCEKQGCRRKALLAHFGE 199
            L+ +V F++  +G+SGIVYC  R   EE+A+ALN        L+G KA   +PYH  +    R E Q KF+  EVDVI  ++AFGMG+DK DVR+V+H D+PKSMEG YQE GRAGRDG + V V ++S + +  LA    K +P++ +E GT+                +  V+ Y E   CRRK +L +FGE
Sbjct:  222 LKEIVRFIKGYQGKSGIVYCLSRKKVEEVAEALN--------LNGIKA---LPYHAGLEAKVRAETQDKFLMEEVDVIVATIAFGMGIDKPDVRYVIHHDIPKSMEGYYQETGRAGRDGGEGVCVAFYSEKDIEKLAKFM-KDKPVSEREIGTQI---------------LKEVIDYVESSVCRRKQILHYFGE 388          
BLAST of mRNA_Ecto-sp9_F_contig871.16893.1 vs.
Match: ATP-dependent (DNA helicase RecQ (Fragment) n=1 Tax=Sphingobacteriales bacterium TaxID=2044944 RepID=A0A4Q3FBS8_9SPHI)

HSP 1 Score: 142 bits (359), Expect = 8.250e-37
Identity = 76/194 (39.18%), Postives = 116/194 (59.79%), Query Frame = 0
Query:    6 LEHLVGFLRERRGQSGIVYCHKRDTAEELAKALNRALRKESLLDGRKAFLAMPYHGKMSDHDRTEAQAKFMSGEVDVITGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRQQRASLKAVKAVDSVVAYCEKQGCRRKALLAHFGE 199
            ++ ++ ++++  G+SGI+YC  R   EE+A+ LN        L+G KA   +PYH  +    R + Q KF+  +V+VI  ++AFGMG+DK DVRFV+H D+PKSMEG YQE GRAGRDG + V + +++++ V  LA    K +P++ +E GT+                +  V+ Y E   CRRK +L +FGE
Sbjct:  145 IKEIIRYIKQNTGKSGIIYCLSRKKVEEVAETLN--------LNGIKA---LPYHAGLEPKVRADTQDKFLMEDVEVIVATIAFGMGIDKPDVRFVIHHDIPKSMEGYYQETGRAGRDGGEGVCIAFYAQKDVDKLAKFM-KDKPVSEREIGTQI---------------LKEVIDYAESAVCRRKQILHYFGE 311          
BLAST of mRNA_Ecto-sp9_F_contig871.16893.1 vs.
Match: DNA (helicase n=1 Tax=Methanimicrococcus blatticola TaxID=91560 RepID=A0A484F682_9EURY)

HSP 1 Score: 147 bits (372), Expect = 1.120e-36
Identity = 78/194 (40.21%), Postives = 112/194 (57.73%), Query Frame = 0
Query:    6 LEHLVGFLRERRGQSGIVYCHKRDTAEELAKALNRALRKESLLDGRKAFLAMPYHGKMSDHDRTEAQAKFMSGEVDVITGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRQQRASLKAVKAVDSVVAYCEKQGCRRKALLAHFGE 199
            +E L G++++ R +SGI+YC  RD+ E LA  LN+             F A+PYH  +SD  R   Q KF+  +VD+I  +VAFGMG+DK DVRFV+H+DLPK++E  YQE GR GRDG +   +++ SR     + FL  K +P + KE+               A + +  +++YCE   CRR  LL +FGE
Sbjct:  219 MEQLEGYIKKNRNKSGIIYCQSRDSVERLATRLNKL-----------GFSALPYHAGLSDDKRARHQDKFIRDDVDIIVATVAFGMGIDKPDVRFVIHYDLPKNLESYYQETGRGGRDGLECECILFFSRGDWHKIRFLIEK-KP-SKKERDL-------------AFQQLSQIISYCESTDCRRNVLLRYFGE 386          
BLAST of mRNA_Ecto-sp9_F_contig871.16893.1 vs.
Match: DNA (helicase n=5 Tax=Mucilaginibacter TaxID=423349 RepID=A0A3E2NYD8_9SPHI)

HSP 1 Score: 147 bits (370), Expect = 1.590e-36
Identity = 81/195 (41.54%), Postives = 116/195 (59.49%), Query Frame = 0
Query:    5 ALEHLVGFLRERRGQSGIVYCHKRDTAEELAKALNRALRKESLLDGRKAFLAMPYHGKMSDHDRTEAQAKFMSGEVDVITGSVAFGMGVDKSDVRFVVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRPLAGKEKGTEAGRKRQQRASLKAVKAVDSVVAYCEKQGCRRKALLAHFGE 199
            A++ +V F+++ +G+SGI+YC  R   EE+A+ALN        L+G     A+PYH  +    R + Q KF+  +V+VI  ++AFGMG+DK DVR+VVH D+PKSMEG YQE GRAGRDG + V V ++S + +  L     K +P+A +E GT+                +  V+ Y E   CRRK LL +FGE
Sbjct:  221 AIKEIVKFVKQNQGKSGIIYCLSRKKVEEVAEALN--------LNG---VRALPYHAGLDPKVRADTQDKFLMEDVEVIVATIAFGMGIDKPDVRYVVHHDMPKSMEGYYQETGRAGRDGGEGVCVAFYSAKDIDKLQKFM-KDKPVAEREIGTQI---------------LKEVIDYAESSVCRRKQLLHYFGE 388          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig871.16893.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
ATP-dependent2.270e-16695.44DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
ATP-dependent8.750e-16293.58DNA helicase n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
DNA6.830e-3842.78helicase n=67 Tax=Bacteria TaxID=2 RepID=A0A494VYP... [more]
ATP-dependent9.120e-3833.46DNA helicase n=1 Tax=Corethron hystrix TaxID=21677... [more]
Uncharacterized3.510e-3740.40protein n=1 Tax=Treponema sp. CETP13 TaxID=1908540... [more]
DNA3.710e-3739.90helicase n=1 Tax=Methanosarcinales archaeon TaxID=... [more]
DNA6.170e-3743.30helicase RecQ n=1 Tax=Pedobacter sp. SYSU D00535 T... [more]
ATP-dependent8.250e-3739.18DNA helicase RecQ (Fragment) n=1 Tax=Sphingobacter... [more]
DNA1.120e-3640.21helicase n=1 Tax=Methanimicrococcus blatticola Tax... [more]
DNA1.590e-3641.54helicase n=5 Tax=Mucilaginibacter TaxID=423349 Rep... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 32..124
e-value: 6.6E-22
score: 88.8
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 6..123
e-value: 1.8E-16
score: 60.5
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 5..187
score: 17.744
IPR032284ATP-dependent DNA helicase RecQ, zinc-binding domainPFAMPF16124RecQ_Zn_bindcoord: 164..242
e-value: 2.1E-9
score: 37.9
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 12..238
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig871contigEcto-sp9_F_contig871:3852..10213 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig871.16893.1mRNA_Ecto-sp9_F_contig871.16893.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig871 3844..10213 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig871.16893.1 ID=prot_Ecto-sp9_F_contig871.16893.1|Name=mRNA_Ecto-sp9_F_contig871.16893.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=263bp
MDGGALEHLVGFLRERRGQSGIVYCHKRDTAEELAKALNRALRKESLLDG
RKAFLAMPYHGKMSDHDRTEAQAKFMSGEVDVITGSVAFGMGVDKSDVRF
VVHWDLPKSMEGLYQELGRAGRDGSKAVSVVYHSRETVGLLAFLARKPRP
LAGKEKGTEAGRKRQQRASLKAVKAVDSVVAYCEKQGCRRKALLAHFGEV
TGAPAAAAAAEQKKHGLATASAGSSKSNIVPTDICRGTCDWCGGERERIK
TDLLTLAGARAGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR032284RecQ_Zn-bd
IPR027417P-loop_NTPase