prot_Ecto-sp9_F_contig870.16885.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig870.16885.1
Unique Nameprot_Ecto-sp9_F_contig870.16885.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length133
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig870.16885.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 7..84
e-value: 6.4E-8
score: 33.7
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 18..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig870contigEcto-sp9_F_contig870:11348..13710 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig870.16885.1mRNA_Ecto-sp9_F_contig870.16885.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig870 11348..13710 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig870.16885.1 ID=prot_Ecto-sp9_F_contig870.16885.1|Name=mRNA_Ecto-sp9_F_contig870.16885.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=133bp
MVLNWCPRIFRQLQNYGSGLKALPLGTFDGLIDLSGLDLSGTSLTTLPAD
ISATLVSLEILRLAGDGMEGLQRIPESQIQTPWWNGCVDCHWKARFSPRK
ASWVLLFEASGYSVAKNLYYIFTGVSPFSFPV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf