prot_Ecto-sp9_F_contig87.16879.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig87.16879.1
Unique Nameprot_Ecto-sp9_F_contig87.16879.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length302
Homology
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BLAST of mRNA_Ecto-sp9_F_contig87.16879.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMV5_ECTSI)

HSP 1 Score: 461 bits (1186), Expect = 8.090e-162
Identity = 264/301 (87.71%), Postives = 268/301 (89.04%), Query Frame = 0 
Query:    1 MASTTRKLYLVAMVICATSLRCDAFSTTSSCSSGRVADQHVMSNSPTTPRTGRGRCGSSIEMKGRNEDGRKRRISSSSSGSVNRGGFVRAAAAAALTLTVAGHRTTSPARAVGVQPGEXXXXXXXXLLLVPALRAKLAVQSVLKLMKDPEKWDEAREALKSPPLAPADFKECFRTYSDADPEQHLAFDLYRIQAQDALKAVSELLAYLASEKNKGSKIDREDVEDLEEAGRSVLQGIDDFLALAPREDVLMVAKNTADQARTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVAGAWVGK 301
            MAS TRKLYLVAM+ICATSLRCDAFSTTSSCSS RVADQH+MSNSPTT RTGRGRCGSS+EMKGRNEDG+KRRISSSSSGSVNRGGFVRAAAAAALTLTVAGHRTTSPARAVGVQPGEXXXXXXXXLLLVPALRAKLAVQSVLKLMKDPEKW EAREALKSPPLAPADFKECFRTYSDADPEQHLAFDLYRIQAQDALKAVSELLAYLASEKNKGSKIDREDVEDLEEAGRSVLQGIDDFLALAPREDVLMVAKNTADQART                             AFVAGAWVGK
Sbjct:    1 MASATRKLYLVAMMICATSLRCDAFSTTSSCSSSRVADQHIMSNSPTTRRTGRGRCGSSMEMKGRNEDGQKRRISSSSSGSVNRGGFVRAAAAAALTLTVAGHRTTSPARAVGVQPGEXXXXXXXXLLLVPALRAKLAVQSVLKLMKDPEKWGEAREALKSPPLAPADFKECFRTYSDADPEQHLAFDLYRIQAQDALKAVSELLAYLASEKNKGSKIDREDVEDLEEAGRSVLQGIDDFLALAPREDVLMVAKNTADQARTAQTARPKSTDAPAALGGGRELEGAVIGEGAFVAGAWVGK 301
[Close]
BLAST of mRNA_Ecto-sp9_F_contig87.16879.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNZ8_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 6.950e-27
Identity = 65/181 (35.91%), Postives = 107/181 (59.12%), Query Frame = 0 
Query:   81 SVNRGGFVRAAAAAALTLTVAGHRTTSPARAVGVQPGEXXXXXXXXLLLVPALRAKLAVQSVLKLMKDPEKWDEAREALKSPPLAPADFKECFRTYSDADPEQHLAFDLYRIQAQDALKAVSELLAYLASEKNKGSKIDREDVEDLEEAGRSVLQGIDDFLALAPREDVLMVAKNTADQAR 261
            S++R   VR  ++  L  + A     +PA A+  Q            LL+P ++ + A   VL L+++P  W+EAR  L+SPPL+  DF +    YSD++ E+H+  DLYR Q   ++KA+ E++++   ++  G K+ +EDV+D+ ++GR++   +DDFLALAP ED+ +V    AD AR
Sbjct:   55 SMSRASVVRLVSSTLLIGSAACGGLAAPASALDPQRDRRTAVPPPRPLLLPVVKLRAATAKVLDLLEEPSGWEEARSLLRSPPLSNPDFAKILDRYSDSNWEKHILGDLYRNQGLASIKALDEVMSFALQQQEDGVKVSQEDVDDVRDSGRALAASLDDFLALAPPEDLRLVKDLVADPAR 235
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig87.16879.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized8.090e-16287.71protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMV5... [more]
Uncharacterized6.950e-2735.91protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNZ8... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..301
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.639

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig87contigEcto-sp9_F_contig87:11228..14259 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig87.16879.1mRNA_Ecto-sp9_F_contig87.16879.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig87 11228..14335 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig87.16879.1 ID=prot_Ecto-sp9_F_contig87.16879.1|Name=mRNA_Ecto-sp9_F_contig87.16879.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=302bp
MASTTRKLYLVAMVICATSLRCDAFSTTSSCSSGRVADQHVMSNSPTTPR
TGRGRCGSSIEMKGRNEDGRKRRISSSSSGSVNRGGFVRAAAAAALTLTV
AGHRTTSPARAVGVQPGERTTAPPNALLLVPALRAKLAVQSVLKLMKDPE
KWDEAREALKSPPLAPADFKECFRTYSDADPEQHLAFDLYRIQAQDALKA
VSELLAYLASEKNKGSKIDREDVEDLEEAGRSVLQGIDDFLALAPREDVL
MVAKNTADQARTAQTARPKSTGAPAALGGGRELEGAVVGEGAFVAGAWVG
K*
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