prot_Ecto-sp9_F_contig8699.16875.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8699.16875.1
Unique Nameprot_Ecto-sp9_F_contig8699.16875.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length203
Homology
BLAST of mRNA_Ecto-sp9_F_contig8699.16875.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8A3_ECTSI)

HSP 1 Score: 338 bits (867), Expect = 2.950e-116
Identity = 172/200 (86.00%), Postives = 180/200 (90.00%), Query Frame = 0
Query:    2 ASNLPKVIVVHQCLSVAFLALTWAVCYQIQPTQGPVFAPINNTIQHSNNAFVVRSRQSFEALISKYETRLTHDWLNKRGIDSGRVAISLAESTLFRKLAKPVTIPGKLWLKFKLSQTFLVGDDRDNGNESTNRGTRRLLVKEASSGTGGWVWLRNGRRSGKRRKAISPPGRRGCGRAPGGSVALPQAASGPLLRSSKDMC 201
            ASNLPKVIVVH+CLSVAFLALTWAVCYQIQPTQGPV APIN TIQ+SNNAF+VRSRQSFEALISK E RL+ DWLNKRGIDSGR+AISLAESTLFRKLAKPVTIPGKLWL  KLSQTFLVGDDRDNGNESTN GTRR LVKEA+SGT GW WLR GRRSGKR K I PPGRRG GRAPG  V LPQAASGP LRSSK++C
Sbjct:   16 ASNLPKVIVVHECLSVAFLALTWAVCYQIQPTQGPVLAPINKTIQNSNNAFIVRSRQSFEALISKSEKRLSQDWLNKRGIDSGRMAISLAESTLFRKLAKPVTIPGKLWLTLKLSQTFLVGDDRDNGNESTNSGTRRPLVKEAASGTRGWGWLRKGRRSGKRGKTICPPGRRGGGRAPGCFVVLPQAASGPFLRSSKEIC 215          
BLAST of mRNA_Ecto-sp9_F_contig8699.16875.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVT6_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 3.190e-61
Identity = 102/118 (86.44%), Postives = 105/118 (88.98%), Query Frame = 0
Query:   86 VAISLAESTLFRKLAKPVTIPGKLWLKFKLSQTFLVGDDRDNGNESTNRGTRRLLVKEASSGTGGWVWLRNGRRSGKRRKAISPPGRRGCGRAPGGSVALPQAASGPLL-RSSKDMCW 202
            +AISLAESTLFRKLAKPVTIPGKLWL  KLSQTFLVGDDRDNGNESTNR TRR LVKEASSGTGGW WLR GRRSGKRRKAI PPGRRG GR PG  VALPQAAS PLL RSSK++CW
Sbjct:    1 MAISLAESTLFRKLAKPVTIPGKLWLTLKLSQTFLVGDDRDNGNESTNRVTRRPLVKEASSGTGGWGWLRKGRRSGKRRKAICPPGRRGGGRTPGCFVALPQAASDPLLLRSSKEICW 118          
BLAST of mRNA_Ecto-sp9_F_contig8699.16875.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Y4_9STRA)

HSP 1 Score: 105 bits (263), Expect = 7.530e-25
Identity = 49/116 (42.24%), Postives = 77/116 (66.38%), Query Frame = 0
Query:    3 SNLPKVIVVHQCLSVAFLALTWAVCYQIQPTQGPVFAPINNTIQHSNNAFVVRSRQSFEALISKYETRLTHD-WLNKRGIDSGRVAISLAESTLFRKLAKPVTIPGKLWLKFKLSQ 117
            ++ P    +H+ L+VAFLA TWA+CYQ QP+Q  +FAP+   I+ S N +V+  R+ F  +++  E ++     L+ +G D+ R+  +LAEST+FRK  KP+TIPGKLW  +K+ +
Sbjct:   25 ADFPTAFAIHELLAVAFLASTWAICYQTQPSQSALFAPLARAIRTSENRWVMGVREGFAGVVASAEAKIAASPRLSSQGWDTARLTTALAESTIFRKSIKPITIPGKLWATWKIME 140          
BLAST of mRNA_Ecto-sp9_F_contig8699.16875.1 vs.
Match: Uncharacterized (protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A4Q6D0M9_9PROT)

HSP 1 Score: 62.0 bits (149), Expect = 1.020e-8
Identity = 36/113 (31.86%), Postives = 58/113 (51.33%), Query Frame = 0
Query:    3 SNLPKVIVVHQCLSVAFLALTWAVCYQIQPTQGPVFAPINNTIQHSNNAFVVRSRQSFEALISKYETRLTHDWLNKRGIDSGRVAISLAESTLFRKLAKPVTIPGKLWLKFKL 115
            S++PK I +H+ L +  LALTW++CY    +Q P+F      I     A + +S ++ + L                   S  + +S  ES+  RKL +P+T+PGK++L FKL
Sbjct:   24 SDIPKAIFIHELLGMFMLALTWSLCYFYPLSQSPMFVKPLAVISSKMPAALAKSLEANKFL-------------------SSPIGVSYVESSCLRKLIRPLTLPGKVFLTFKL 117          
BLAST of mRNA_Ecto-sp9_F_contig8699.16875.1 vs.
Match: Uncharacterized (protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JN94_GUITC)

HSP 1 Score: 57.4 bits (137), Expect = 4.260e-7
Identity = 33/111 (29.73%), Postives = 61/111 (54.95%), Query Frame = 0
Query:    3 SNLPKVIVVHQCLSVAFLALTWAVCYQIQPTQGPVFAPINNTIQHSNNAFVVRSRQSFEALISKYET--RLTHDWLNKRGIDSGRVAISLAESTLFRKLAKPVTIPGKLWL 111
            ++L K +VVH+ + +++LA +W +CY +QP +           +  +  F     + F+   +K +   R +  +   R +D  R+ +SLAES++ R  A+PVT+P KLW+
Sbjct:   35 TDLAKALVVHETVGISWLAGSWGLCYAVQPIR-----------RLGSRYFQQNIDKFFDKAFTKLQPVFRWSARFALVRSMDKQRLIMSLAESSILRNAARPVTVPLKLWV 134          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8699.16875.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
Uncharacterized2.950e-11686.00protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.190e-6186.44protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized7.530e-2542.24protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Uncharacterized1.020e-831.86protein n=1 Tax=Proteobacteria bacterium TaxID=197... [more]
Uncharacterized4.260e-729.73protein n=2 Tax=Guillardia theta TaxID=55529 RepID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..202
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.701

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8699contigEcto-sp9_F_contig8699:765..2013 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8699.16875.1mRNA_Ecto-sp9_F_contig8699.16875.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8699 758..2937 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8699.16875.1 ID=prot_Ecto-sp9_F_contig8699.16875.1|Name=mRNA_Ecto-sp9_F_contig8699.16875.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=203bp
MASNLPKVIVVHQCLSVAFLALTWAVCYQIQPTQGPVFAPINNTIQHSNN
AFVVRSRQSFEALISKYETRLTHDWLNKRGIDSGRVAISLAESTLFRKLA
KPVTIPGKLWLKFKLSQTFLVGDDRDNGNESTNRGTRRLLVKEASSGTGG
WVWLRNGRRSGKRRKAISPPGRRGCGRAPGGSVALPQAASGPLLRSSKDM
CW*
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