prot_Ecto-sp9_F_contig869.16871.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig869.16871.1
Unique Nameprot_Ecto-sp9_F_contig869.16871.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length67
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig869.16871.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A9_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 9.920e-26
Identity = 62/67 (92.54%), Postives = 63/67 (94.03%), Query Frame = 0 
Query:    1 MRSRGQTNQRACQPEAKDVARRRRRRALPGGDEKRTALEARDQQRFRPDVAAGRSDTASATARRRPA 67
            MRSRGQTNQRACQ EAKDVARRRRRRALP G EKRTALEARDQ+RFRPDVAAGRSDTASATARRR A
Sbjct:   89 MRSRGQTNQRACQQEAKDVARRRRRRALPTGGEKRTALEARDQRRFRPDVAAGRSDTASATARRRSA 155
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig869.16871.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized9.920e-2692.54protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig869contigEcto-sp9_F_contig869:362..562 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig869.16871.1mRNA_Ecto-sp9_F_contig869.16871.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig869 362..2671 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig869.16871.1 ID=prot_Ecto-sp9_F_contig869.16871.1|Name=mRNA_Ecto-sp9_F_contig869.16871.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=67bp
MRSRGQTNQRACQPEAKDVARRRRRRALPGGDEKRTALEARDQQRFRPDV
AAGRSDTASATARRRPA
back to top