prot_Ecto-sp9_F_contig10847.732.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig10847.732.1
Unique Name	prot_Ecto-sp9_F_contig10847.732.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	88

Homology

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BLAST of mRNA_Ecto-sp9_F_contig10847.732.1 vs.
Match: Eukaryotic (initiation factor 4G n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G664_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 2.990e-42
Identity = 87/111 (78.38%), Postives = 88/111 (79.28%), Query Frame = 0

Query:    1 MLGNIQFIGELYKKSMLKENVMKTCVEQLLNAKKE-----------------------ALGKLIRTIGSTLDTSKNTLYMKEIFRLMDKIANNKAINSRMRFMIRDLEELR 88
            MLGNIQFIGELYKKSMLKENVMKTCVEQLLNAKKE                       ALGKLIRTIGSTLDTSKNTLYMKEIFRLMDKIANNK+INSRMRFMIRDLEELR
Sbjct:   24 MLGNIQFIGELYKKSMLKENVMKTCVEQLLNAKKEVATDRTLKALKFKNMDVDEDNLEALGKLIRTIGSTLDTSKNTLYMKEIFRLMDKIANNKSINSRMRFMIRDLEELR 134

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BLAST of mRNA_Ecto-sp9_F_contig10847.732.1 vs.
Match: MI (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU9_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 3.480e-40
Identity = 85/111 (76.58%), Postives = 86/111 (77.48%), Query Frame = 0

Query:    1 MLGNIQFIGELYKKSMLKENVMKTCVEQLLNAKKE-----------------------ALGKLIRTIGSTLDTSKNTLYMKEIFRLMDKIANNKAINSRMRFMIRDLEELR 88
            MLGNIQFIGELYKKSMLKENVMKTCVE LLNAKKE                       ALGKLIRTIGSTLDTSKNTLYM EIFRLMDKIANNK+INSRMRFMIRDLEELR
Sbjct:  580 MLGNIQFIGELYKKSMLKENVMKTCVEHLLNAKKEVGADRTLKALKFKNGDVDEDNLEALGKLIRTIGSTLDTSKNTLYMTEIFRLMDKIANNKSINSRMRFMIRDLEELR 690

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BLAST of mRNA_Ecto-sp9_F_contig10847.732.1 vs.
Match: MI (domain-containing protein n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J8QS48_GOSRA)

HSP 1 Score: 81.6 bits (200), Expect = 3.650e-16
Identity = 45/95 (47.37%), Postives = 62/95 (65.26%), Query Frame = 0

Query:    1 MLGNIQFIGELYKKSMLKENVMKTCVEQLLNAKK-------EALGKLIRTIGSTLDTSKNTLYMKEIFRLMDKIANNKAINSRMRFMIRDLEELR 88
            MLGNI+FIGELYKK ML E +M  C+++LL   +       EAL KL+ TIG  +D  K  +YM   F  M K++NN  ++SR+RFM++D  +LR
Sbjct:   49 MLGNIRFIGELYKKKMLTERIMHECIKKLLGEYENPDEEDIEALCKLMSTIGEMIDYPKAKVYMDAYFERMAKLSNNVKLSSRVRFMLKDAIDLR 143

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BLAST of mRNA_Ecto-sp9_F_contig10847.732.1 vs.
Match: Eukaryotic (initiation factor 4G n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8L2X0_STIJA)

HSP 1 Score: 80.9 bits (198), Expect = 7.120e-16
Identity = 43/92 (46.74%), Postives = 61/92 (66.30%), Query Frame = 0

Query:    1 MLGNIQFIGELYKKSMLKENVMKTCVEQLLNAKKE----ALGKLIRTIGSTLDTSKNTLYMKEIFRLMDKIANNKAINSRMRFMIRDLEELR 88
            ++GNI+FIGEL+K S+L E +M+ C+  LL AK E     + KL+ TIG +LD  K    M + F  +DKI   K I+SR+RFM+ DL++LR
Sbjct:  897 IIGNIRFIGELFKLSLLTEKIMQGCIFLLLKAKDEESLECMSKLVSTIGQSLDHQKGKALMDQYFNQVDKIIKEKKISSRIRFMLHDLKDLR 988

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BLAST of mRNA_Ecto-sp9_F_contig10847.732.1 vs.
Match: MI (domain-containing protein n=7 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KXJ3_PHYPA)

HSP 1 Score: 80.9 bits (198), Expect = 7.180e-16
Identity = 44/95 (46.32%), Postives = 64/95 (67.37%), Query Frame = 0

Query:    1 MLGNIQFIGELYKKSMLKENVMKTCVEQLLNAKK-------EALGKLIRTIGSTLDTSKNTLYMKEIFRLMDKIANNKAINSRMRFMIRDLEELR 88
            MLGNI+FIGELYKKSML E +M  C+++LL   +       EAL KL+ TIG  +D  K   ++   FR M+ ++NN  +++R+RFM++D+ ELR
Sbjct: 1739 MLGNIRFIGELYKKSMLTERIMHECIKKLLGEYQKPDEEDVEALCKLMSTIGRIIDHHKAKEHIDAYFRRMENLSNNSKLSARIRFMLKDVIELR 1833

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BLAST of mRNA_Ecto-sp9_F_contig10847.732.1 vs.
Match: Hypothetical (protein n=2 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SBK7_9CHLO)

HSP 1 Score: 79.7 bits (195), Expect = 7.240e-16
Identity = 44/95 (46.32%), Postives = 62/95 (65.26%), Query Frame = 0

Query:    1 MLGNIQFIGELYKKSMLKENVMKTCVEQLLNAKK-------EALGKLIRTIGSTLDTSKNTLYMKEIFRLMDKIANNKAINSRMRFMIRDLEELR 88
            MLGNI+FIGELY+KSML E +M TC+ +LL   +       EAL KL+ T G  LD  +   +M   FR +D+++ N  I+SR RFM +D++E+R
Sbjct:  156 MLGNIKFIGELYRKSMLTERIMHTCIMKLLGEHQIPDEEDVEALCKLLTTTGGQLDHMRAKEHMDAYFRRIDQLSKNMGISSRHRFMCQDIKEMR 250

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BLAST of mRNA_Ecto-sp9_F_contig10847.732.1 vs.
Match: MIF4-like, (type 1/2/3 n=3 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096P781_OSTTA)

HSP 1 Score: 80.1 bits (196), Expect = 1.320e-15
Identity = 43/96 (44.79%), Postives = 64/96 (66.67%), Query Frame = 0

Query:    1 MLGNIQFIGELYKKSMLKENVMKTCVEQLLNAKK--------EALGKLIRTIGSTLDTSKNTLYMKEIFRLMDKIANNKAINSRMRFMIRDLEELR 88
            MLGNI+FIGEL+KKSML E +M  C+++LL A +        EAL KL+ T+GS LD  K   +M   FR +D ++ +  ++SR RFM++D+ ++R
Sbjct:  653 MLGNIRFIGELFKKSMLTERIMHVCIQKLLGAGEKTPSEEDVEALCKLLSTVGSQLDHQKAKQHMDAYFRSVDNLSKSSELSSRHRFMLQDVLDMR 748

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BLAST of mRNA_Ecto-sp9_F_contig10847.732.1 vs.
Match: eukaryotic (translation initiation factor 4 gamma 3-like isoform X1 n=3 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=UPI000B45DCA5)

HSP 1 Score: 80.1 bits (196), Expect = 1.330e-15
Identity = 46/91 (50.55%), Postives = 62/91 (68.13%), Query Frame = 0

Query:    2 LGNIQFIGELYKKSMLKENVMKTCVEQLLNAKK----EALGKLIRTIGSTLDTSKNTLYMKEIFRLMDKIANNKAINSRMRFMIRDLEELR 88
            LGNI+FIGEL+K  ML EN+M  CV +LL AK     E L +L+ TIG  LD+ K    M++ F+ M KIA +K  +SR+RFM++D+ ELR
Sbjct:  985 LGNIRFIGELFKLKMLTENIMHDCVFKLLKAKDLESLECLCRLLTTIGKELDSDKARPRMEQYFQQMGKIAQDKKTSSRVRFMLQDVIELR 1075

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BLAST of mRNA_Ecto-sp9_F_contig10847.732.1 vs.
Match: Predicted (protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9SMV0_PHYPA)

HSP 1 Score: 79.0 bits (193), Expect = 2.050e-15
Identity = 43/95 (45.26%), Postives = 63/95 (66.32%), Query Frame = 0

Query:    1 MLGNIQFIGELYKKSMLKENVMKTCVEQLLNAKK-------EALGKLIRTIGSTLDTSKNTLYMKEIFRLMDKIANNKAINSRMRFMIRDLEELR 88
            MLGNI+FIGELYKKSML E +M  C+++LL           EAL KL+ TIG  +D  K   ++   FR M+ ++NN  +++R+RF+++D+ ELR
Sbjct:  167 MLGNIRFIGELYKKSMLTERIMHECIKKLLGEYHNPDEEDVEALCKLMSTIGRIIDHHKAREHIDAYFRRMESLSNNTKLSARIRFLLKDVMELR 261

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BLAST of mRNA_Ecto-sp9_F_contig10847.732.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KJ91_CHABU)

HSP 1 Score: 79.3 bits (194), Expect = 2.510e-15
Identity = 44/95 (46.32%), Postives = 66/95 (69.47%), Query Frame = 0

Query:    1 MLGNIQFIGELYKKSMLKENVMKTCVEQLL----NAKKE---ALGKLIRTIGSTLDTSKNTLYMKEIFRLMDKIANNKAINSRMRFMIRDLEELR 88
            MLGNI+FIGEL+KK ML E +M  C+++LL    N+++E   +L KL+ TIG TLD  K   +M   F+ M+++  N+ ++SR+RFM+ D+ ELR
Sbjct: 3360 MLGNIRFIGELFKKQMLTEKIMHECIKKLLGDIENSEEEDIESLCKLLTTIGHTLDHPKAHQHMDSYFKRMERLTTNQKLSSRIRFMVLDVIELR 3454

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig10847.732.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig10847.732.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
Eukaryotic	2.990e-42	78.38	initiation factor 4G n=1 Tax=Ectocarpus siliculosu...	[more]
MI	3.480e-40	76.58	domain-containing protein n=1 Tax=Ectocarpus sp. C...	[more]
MI	3.650e-16	47.37	domain-containing protein n=2 Tax=Gossypium TaxID=...	[more]
Eukaryotic	7.120e-16	46.74	initiation factor 4G n=1 Tax=Stichopus japonicus T...	[more]
MI	7.180e-16	46.32	domain-containing protein n=7 Tax=Physcomitrium pa...	[more]
Hypothetical	7.240e-16	46.32	protein n=2 Tax=Mantoniella antarctica TaxID=81844...	[more]
MIF4-like,	1.320e-15	44.79	type 1/2/3 n=3 Tax=Ostreococcus tauri TaxID=70448 ...	[more]
eukaryotic	1.330e-15	50.55	translation initiation factor 4 gamma 3-like isofo...	[more]
Predicted	2.050e-15	45.26	protein n=1 Tax=Physcomitrium patens TaxID=3218 Re...	[more]
Uncharacterized	2.510e-15	46.32	protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003890	MIF4G-like, type 3	PFAM	PF02854	MIF4G	coord: 1..88 e-value: 6.2E-14 score: 52.1
IPR016021	MIF4G-like domain superfamily	GENE3D	1.25.40.180		coord: 1..88 e-value: 2.2E-27 score: 97.9
None	No IPR available	PANTHER	PTHR23253	EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA	coord: 1..88
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 1..88

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig10847	contig	Ecto-sp9_F_contig10847:441..1296 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig10847.732.1	mRNA_Ecto-sp9_F_contig10847.732.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig10847 441..1311 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig10847.732.1 ID=prot_Ecto-sp9_F_contig10847.732.1|Name=mRNA_Ecto-sp9_F_contig10847.732.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=88bp
MLGNIQFIGELYKKSMLKENVMKTCVEQLLNAKKEALGKLIRTIGSTLDT
SKNTLYMKEIFRLMDKIANNKAINSRMRFMIRDLEELR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003890	MIF4G-like_typ-3
IPR016021	MIF4-like_sf
IPR016024	ARM-type_fold