prot_Ecto-sp9_F_contig10769.668.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig10769.668.1
Unique Nameprot_Ecto-sp9_F_contig10769.668.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length126
Homology
BLAST of mRNA_Ecto-sp9_F_contig10769.668.1 vs.
Match: Putative (retinoblastoma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8E5_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 1.870e-40
Identity = 76/85 (89.41%), Postives = 81/85 (95.29%), Query Frame = 0
Query:    9 QVLLDAETERLSSEDHSRLLEQEALHKALLACCLEAVLKASSLLSLTFPWVLRRMDIDALDLCKVLESFARFCPGLPVRLQRGMY 93
            +VLLDAETERLSSEDHSRLLEQE LHKALLACCLEAVLKASSLLSLTFPWVLRRMDIDALDLCKVLESFARFCPGLP+ L+  ++
Sbjct:  647 EVLLDAETERLSSEDHSRLLEQETLHKALLACCLEAVLKASSLLSLTFPWVLRRMDIDALDLCKVLESFARFCPGLPMNLKYHLF 731          
BLAST of mRNA_Ecto-sp9_F_contig10769.668.1 vs.
Match: RB_A (domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA1_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 3.070e-39
Identity = 74/85 (87.06%), Postives = 80/85 (94.12%), Query Frame = 0
Query:    9 QVLLDAETERLSSEDHSRLLEQEALHKALLACCLEAVLKASSLLSLTFPWVLRRMDIDALDLCKVLESFARFCPGLPVRLQRGMY 93
            +VLL+AETERL SEDHSRLLEQE LHKALLACCLEAVLKASSLLSLTFPWVLRRMDIDALDLCKVLESFARFCPGLP+ L+  ++
Sbjct:  769 EVLLEAETERLRSEDHSRLLEQETLHKALLACCLEAVLKASSLLSLTFPWVLRRMDIDALDLCKVLESFARFCPGLPMNLKYHLF 853          
BLAST of mRNA_Ecto-sp9_F_contig10769.668.1 vs.
Match: Retinoblastoma-like (protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ52_NANGC)

HSP 1 Score: 74.3 bits (181), Expect = 6.460e-15
Identity = 40/95 (42.11%), Postives = 58/95 (61.05%), Query Frame = 0
Query:   11 LLDAETERLSSEDHSRLLEQEALHKALLACCLEAVLKASSLLSLTFPWVLRRMDIDALDLCKVLESFARFCPGLPVRLQRGMYPLVVTLLLTLLW 105
            +LD ET+RL   DH  LL     H+ALLACCL+ + KA SL++L+   VL+  ++ A DL K LESF +  PGLP  L+  +  +   +L ++ W
Sbjct:    1 MLDRETDRLRRRDHGALLRHPTFHRALLACCLQVLAKALSLVTLSLGRVLQICELQAYDLFKALESFVKASPGLPSLLRLHLIEVEEQILESMAW 95          
BLAST of mRNA_Ecto-sp9_F_contig10769.668.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKQ6_PYTOL)

HSP 1 Score: 73.6 bits (179), Expect = 1.080e-12
Identity = 43/97 (44.33%), Postives = 60/97 (61.86%), Query Frame = 0
Query:    9 QVLLDAETERLSSEDHSRLLEQEALHKALLACCLEAVLKASSLLSLTFPWVLRRMDIDALDLCKVLESFARFCPGLPVRLQRGMYPLVVTLLLTLLW 105
            + LL AE ERL + + S LL  E    +L AC LE VLKA SL++L+FP++L  + ++A D  KV+ESF +  P LP  L+R M  L   +L +L W
Sbjct:  625 EALLVAERERLHTTNFSSLLNNETFVSSLFACSLEVVLKAHSLITLSFPFLLDTLGVNAFDFGKVIESFVKHGPKLPSALKRHMRDLEQMILDSLAW 721          
BLAST of mRNA_Ecto-sp9_F_contig10769.668.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSA8_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.080e-12
Identity = 42/97 (43.30%), Postives = 62/97 (63.92%), Query Frame = 0
Query:    9 QVLLDAETERLSSEDHSRLLEQEALHKALLACCLEAVLKASSLLSLTFPWVLRRMDIDALDLCKVLESFARFCPGLPVRLQRGMYPLVVTLLLTLLW 105
            + LL +E ERL + + S LL  E+   +L AC LE VLKA SL++L+FP++L  + ++A D  K++ESF +  P LP  L+R M  L  T+L +L W
Sbjct:  639 EALLLSERERLRTTNFSSLLHNESFVASLFACSLEVVLKAHSLITLSFPFLLDAIRVNAFDFGKIVESFVKHAPRLPNALKRHMRDLEQTILDSLAW 735          
BLAST of mRNA_Ecto-sp9_F_contig10769.668.1 vs.
Match: Hypothetical (protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC22_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 6.860e-12
Identity = 35/95 (36.84%), Postives = 57/95 (60.00%), Query Frame = 0
Query:   11 LLDAETERLSSEDHSRLLEQEALHKALLACCLEAVLKASSLLSLTFPWVLRRMDIDALDLCKVLESFARFCPGLPVRLQRGMYPLVVTLLLTLLW 105
            ++ +ET RL S+DHS +L  +  H++LLACC E +LK + +++ T+P +L  + + + D    +E F R  P LP  L+R M  L+  +LL   W
Sbjct:  531 MIQSETRRLRSKDHSAILRNDVFHRSLLACCCEVILKPACVIAFTYPDLLGYLGLTSFDFQTTIEPFVRAAPDLPSGLKRHMNDLLDVILLQDAW 625          
BLAST of mRNA_Ecto-sp9_F_contig10769.668.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WCJ4_GLOUD)

HSP 1 Score: 70.5 bits (171), Expect = 1.300e-11
Identity = 41/97 (42.27%), Postives = 61/97 (62.89%), Query Frame = 0
Query:    9 QVLLDAETERLSSEDHSRLLEQEALHKALLACCLEAVLKASSLLSLTFPWVLRRMDIDALDLCKVLESFARFCPGLPVRLQRGMYPLVVTLLLTLLW 105
            + LL +E +RL + + S LL  E    +L AC LE VLKA SL++L+FP++L  + ++A D  K++ESF +  P LP  L+R M  L  T+L +L W
Sbjct:  721 EALLVSEKDRLRTTNFSSLLNNETFVSSLYACSLEVVLKAHSLITLSFPFLLDILGVNAFDFGKIIESFVKHVPKLPNVLKRHMRDLEQTILDSLGW 817          
BLAST of mRNA_Ecto-sp9_F_contig10769.668.1 vs.
Match: Uncharacterized (protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y8I2_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.410e-11
Identity = 37/97 (38.14%), Postives = 58/97 (59.79%), Query Frame = 0
Query:    9 QVLLDAETERLSSEDHSRLLEQEALHKALLACCLEAVLKASSLLSLTFPWVLRRMDIDALDLCKVLESFARFCPGLPVRLQRGMYPLVVTLLLTLLW 105
            + +L +E ERL S D S+LL  E    AL ACC E  LK+ SL++L++P++L  + ++A       ESF ++ P LPV L++ M  +   +L +L W
Sbjct:  653 EPMLRSERERLRSGDFSKLLNNEVFIAALFACCAEVTLKSHSLITLSYPFLLEHLHVNAFHFVTTSESFVKYAPKLPVALKKHMGDVKNRILDSLAW 749          
BLAST of mRNA_Ecto-sp9_F_contig10769.668.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF97_PYTIN)

HSP 1 Score: 69.7 bits (169), Expect = 2.470e-11
Identity = 39/97 (40.21%), Postives = 57/97 (58.76%), Query Frame = 0
Query:    9 QVLLDAETERLSSEDHSRLLEQEALHKALLACCLEAVLKASSLLSLTFPWVLRRMDIDALDLCKVLESFARFCPGLPVRLQRGMYPLVVTLLLTLLW 105
            + LL  E +RL S + + LL  E    +L  C LE VLKA  L++L+FP++L  + ++A D  KV+ESF +  P LP  L+R M  L   +L +L W
Sbjct: 1051 EALLRTERDRLRSSNFTTLLRNETFISSLFTCSLEVVLKAHGLITLSFPFLLGTLGVNAFDFGKVIESFVKHVPKLPSTLKRHMRDLEQVILDSLAW 1147          
BLAST of mRNA_Ecto-sp9_F_contig10769.668.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YEB9_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 8.320e-11
Identity = 34/84 (40.48%), Postives = 52/84 (61.90%), Query Frame = 0
Query:    9 QVLLDAETERLSSEDHSRLLEQEALHKALLACCLEAVLKASSLLSLTFPWVLRRMDIDALDLCKVLESFARFCPGLPVRLQRGM 92
            + LL +E ERL + D S+LL  E    AL ACC E VLKA SL+++++P++L  + ++A       ESF ++ P LP  L++ M
Sbjct:  601 EPLLLSERERLRNNDFSKLLNNEVFLAALFACCAEVVLKAHSLITISYPFLLEHLHVNAFHFVTTSESFVKYAPKLPSALKKHM 684          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10769.668.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Putative1.870e-4089.41retinoblastoma n=1 Tax=Ectocarpus siliculosus TaxI... [more]
RB_A3.070e-3987.06domain-containing protein n=2 Tax=Ectocarpus sp. C... [more]
Retinoblastoma-like6.460e-1542.11protein (Fragment) n=1 Tax=Nannochloropsis gaditan... [more]
Uncharacterized1.080e-1244.33protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Uncharacterized1.080e-1243.30protein n=1 Tax=Pythium brassicum TaxID=1485010 Re... [more]
Hypothetical6.860e-1236.84protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=1... [more]
Uncharacterized1.300e-1142.27protein n=1 Tax=Globisporangium ultimum (strain AT... [more]
Uncharacterized2.410e-1138.14protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID... [more]
Uncharacterized2.470e-1140.21protein n=1 Tax=Pythium insidiosum TaxID=114742 Re... [more]
Uncharacterized8.320e-1140.48protein n=1 Tax=Phytophthora palmivora var. palmiv... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.472.10coord: 7..105
e-value: 1.3E-21
score: 79.2
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..35
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 111..125
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 61..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 92..110
IPR002720Retinoblastoma-associated protein, A-boxPFAMPF01858RB_Acoord: 11..105
e-value: 1.2E-22
score: 80.7
IPR028309Retinoblastoma protein familyPANTHERPTHR13742RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATEDcoord: 11..105
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 10..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10769contigEcto-sp9_F_contig10769:153..1879 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10769.668.1mRNA_Ecto-sp9_F_contig10769.668.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig10769 153..1879 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig10769.668.1 ID=prot_Ecto-sp9_F_contig10769.668.1|Name=mRNA_Ecto-sp9_F_contig10769.668.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=126bp
MNNPPPLSQVLLDAETERLSSEDHSRLLEQEALHKALLACCLEAVLKASS
LLSLTFPWVLRRMDIDALDLCKVLESFARFCPGLPVRLQRGMYPLVVTLL
LTLLWVRLPATYPRQTNMSSNVYTH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002720RB_A
IPR028309RB_fam
IPR036915Cyclin-like_sf