prot_Ecto-sp9_F_contig1006.98.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1006.98.1
Unique Nameprot_Ecto-sp9_F_contig1006.98.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length274
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1006.98.1 vs.
Match: Ankyrin (repeat domain-containing protein 39 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIA3_ECTSI)

HSP 1 Score: 241 bits (615), Expect = 1.130e-77
Identity = 141/231 (61.04%), Postives = 144/231 (62.34%), Query Frame = 0 
Query:   43 MVAPEPENKKIDAVSGERQKLDRRKRRCPVVSVHRYPNNSEDDGEGKEDEGAGKRRSFARVVMQEDVAGFSHLVQEGTGILDSDGHGWSALHWASSRGSTVLTYGILQEIKLLREADSSAGEGTDGASNAVAGFLDLRENLGGWTALHLAAIGGHLDVVYMLMEAGCDPRVKDKVGDQPIHCIRRKRTSEGLVKRLRNALLDLSDSEEGSCEENIEPPPRRGSIRERRRYR 273
            MVAPEPEN KIDAVSGERQKLDRRKRRCPV +                       R+ A V                                                       DSSAGEGTDG SNAVAGFLDLRENLGGWTALHLAAIGGHLDVVYMLME GCDPRVKDKVGDQPIHCIRRKRTSEGLV RLRNALLDLSDSEE SCEEN+EP PRRGSIRERRRYR
Sbjct:    1 MVAPEPENMKIDAVSGERQKLDRRKRRCPVPAD----------------------RTHAFV-------------------------------------------------------DSSAGEGTDGESNAVAGFLDLRENLGGWTALHLAAIGGHLDVVYMLMEVGCDPRVKDKVGDQPIHCIRRKRTSEGLVTRLRNALLDLSDSEESSCEENMEPQPRRGSIRERRRYR 154
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BLAST of mRNA_Ecto-sp9_F_contig1006.98.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI94_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 3.520e-32
Identity = 64/70 (91.43%), Postives = 66/70 (94.29%), Query Frame = 0 
Query:    3 IKGTEQTTVGKIAEGYGDDNEDRRRNQQSHEKVEAGEPSTMVAPEPENKKIDAVSGERQKLDRRKRRCPV 72
            I G EQTTVGKIAEG GDDNEDRRRNQQSHEK+EAG+PSTMVAPEPENKKID VSGERQKLDRRKRRCPV
Sbjct:   27 INGKEQTTVGKIAEGDGDDNEDRRRNQQSHEKLEAGKPSTMVAPEPENKKIDPVSGERQKLDRRKRRCPV 96
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BLAST of mRNA_Ecto-sp9_F_contig1006.98.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BI40_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.860e-12
Identity = 43/112 (38.39%), Postives = 63/112 (56.25%), Query Frame = 0 
Query:  117 QEGTGILDSDGHGWSALHWASSRGSTVLTYGILQEIKLLREADSSAGEGTDGASNAVAGFLDLRENLGGWTALHLAAIGG---HLDVVYMLMEAGCDPRVKDKVGDQPIHCI 225
            +EG  + ++D H W+AL WA S  +  +   +L    LLR+A    GE +D  + +  G+LD ++ + GWTALHLAAIGG   H     +L+ A     VKD   D+P+ CI
Sbjct:  185 EEGGDLFETDAHEWTALMWAVSEANVDMVETLLS---LLRDA----GEASDDEAESAKGWLDSKDRINGWTALHLAAIGGTRNHFSCARLLVRARAKLDVKDACLDEPLDCI 289
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BLAST of mRNA_Ecto-sp9_F_contig1006.98.1 vs.
Match: C2H2-type (domain-containing protein n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8Y3E6_BLAGE)

HSP 1 Score: 58.5 bits (140), Expect = 4.640e-6
Identity = 36/94 (38.30%), Postives = 50/94 (53.19%), Query Frame = 0 
Query:  135 WASSR-GSTVLTYGILQEIKLLREADSSAGEGTDGASNAVAGFLD----LRENLGGW--TALHLAAIGGHLDVVYMLMEAGCDPRVKDKVGDQP 221
            WA+ R G + L    LQ  + + E   +     DG+   V   ++    L EN+G    T LH+AA GGH+D++  LMEAGCDP VK+K    P
Sbjct:  542 WAACRLGDSELLINSLQAAQPIEEEPENCANEVDGSDKNVITRVEYLKCLNENVGDSKETLLHVAAQGGHMDIIRALMEAGCDPCVKNKKSQTP 635
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1006.98.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Ankyrin1.130e-7761.04repeat domain-containing protein 39 n=1 Tax=Ectoca... [more]
Uncharacterized3.520e-3291.43protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Hypothetical1.860e-1238.39protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
C2H2-type4.640e-638.30domain-containing protein n=1 Tax=Blattella german... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 128..157
e-value: 360.0
score: 8.3
coord: 184..213
e-value: 4.0E-5
score: 33.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 184..216
score: 13.197
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 114..215
e-value: 2.0E-8
score: 34.7
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 184..250
score: 16.096
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 95..243
e-value: 5.5E-20
score: 73.2
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 104..238
NoneNo IPR availablePANTHERPTHR24126FAMILY NOT NAMEDcoord: 112..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1006contigEcto-sp9_F_contig1006:9891..13927 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1006.98.1mRNA_Ecto-sp9_F_contig1006.98.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1006 9891..13927 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1006.98.1 ID=prot_Ecto-sp9_F_contig1006.98.1|Name=mRNA_Ecto-sp9_F_contig1006.98.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=274bp
SDIKGTEQTTVGKIAEGYGDDNEDRRRNQQSHEKVEAGEPSTMVAPEPEN
KKIDAVSGERQKLDRRKRRCPVVSVHRYPNNSEDDGEGKEDEGAGKRRSF
ARVVMQEDVAGFSHLVQEGTGILDSDGHGWSALHWASSRGSTVLTYGILQ
EIKLLREADSSAGEGTDGASNAVAGFLDLRENLGGWTALHLAAIGGHLDV
VYMLMEAGCDPRVKDKVGDQPIHCIRRKRTSEGLVKRLRNALLDLSDSEE
GSCEENIEPPPRRGSIRERRRYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf