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Homology
BLAST of mRNA_Ecto-sp9_F_contig1006.98.1 vs.
Match: Ankyrin (repeat domain-containing protein 39 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIA3_ECTSI) HSP 1 Score: 241 bits (615), Expect = 1.130e-77 Identity = 141/231 (61.04%), Postives = 144/231 (62.34%), Query Frame = 1
Query: 127 MVAPEPENKKIDAVSGERQKLDRRKRRCPVVSVHRYPNNSEDDGEGKEDEGAGKRRSFARVVMQEDVAGFSHLVQEGTGILDSDGHGWSALHWASSRGSTVLTYGILQEIKLLREADSSAGEGTDGASNAVAGFLDLRENLGGWTALHLAAIGGHLDVVYMLMEAGCDPRVKDKVGDQPIHCIRRKRTSEGLVKRLRNALLDLSDSEEGSCEENIEPPPRRGSIRERRRYR 819
MVAPEPEN KIDAVSGERQKLDRRKRRCPV + R+ A V DSSAGEGTDG SNAVAGFLDLRENLGGWTALHLAAIGGHLDVVYMLME GCDPRVKDKVGDQPIHCIRRKRTSEGLV RLRNALLDLSDSEE SCEEN+EP PRRGSIRERRRYR
Sbjct: 1 MVAPEPENMKIDAVSGERQKLDRRKRRCPVPAD----------------------RTHAFV-------------------------------------------------------DSSAGEGTDGESNAVAGFLDLRENLGGWTALHLAAIGGHLDVVYMLMEVGCDPRVKDKVGDQPIHCIRRKRTSEGLVTRLRNALLDLSDSEESSCEENMEPQPRRGSIRERRRYR 154
BLAST of mRNA_Ecto-sp9_F_contig1006.98.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI94_9PHAE) HSP 1 Score: 123 bits (309), Expect = 3.520e-32 Identity = 64/70 (91.43%), Postives = 66/70 (94.29%), Query Frame = 1
Query: 7 IKGTEQTTVGKIAEGYGDDNEDRRRNQQSHEKVEAGEPSTMVAPEPENKKIDAVSGERQKLDRRKRRCPV 216
I G EQTTVGKIAEG GDDNEDRRRNQQSHEK+EAG+PSTMVAPEPENKKID VSGERQKLDRRKRRCPV
Sbjct: 27 INGKEQTTVGKIAEGDGDDNEDRRRNQQSHEKLEAGKPSTMVAPEPENKKIDPVSGERQKLDRRKRRCPV 96
BLAST of mRNA_Ecto-sp9_F_contig1006.98.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BI40_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 1.860e-12 Identity = 43/112 (38.39%), Postives = 63/112 (56.25%), Query Frame = 1
Query: 349 QEGTGILDSDGHGWSALHWASSRGSTVLTYGILQEIKLLREADSSAGEGTDGASNAVAGFLDLRENLGGWTALHLAAIGG---HLDVVYMLMEAGCDPRVKDKVGDQPIHCI 675
+EG + ++D H W+AL WA S + + +L LLR+A GE +D + + G+LD ++ + GWTALHLAAIGG H +L+ A VKD D+P+ CI
Sbjct: 185 EEGGDLFETDAHEWTALMWAVSEANVDMVETLLS---LLRDA----GEASDDEAESAKGWLDSKDRINGWTALHLAAIGGTRNHFSCARLLVRARAKLDVKDACLDEPLDCI 289
BLAST of mRNA_Ecto-sp9_F_contig1006.98.1 vs.
Match: C2H2-type (domain-containing protein n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8Y3E6_BLAGE) HSP 1 Score: 58.5 bits (140), Expect = 4.640e-6 Identity = 36/94 (38.30%), Postives = 50/94 (53.19%), Query Frame = 1
Query: 403 WASSR-GSTVLTYGILQEIKLLREADSSAGEGTDGASNAVAGFLD----LRENLGGW--TALHLAAIGGHLDVVYMLMEAGCDPRVKDKVGDQP 663
WA+ R G + L LQ + + E + DG+ V ++ L EN+G T LH+AA GGH+D++ LMEAGCDP VK+K P
Sbjct: 542 WAACRLGDSELLINSLQAAQPIEEEPENCANEVDGSDKNVITRVEYLKCLNENVGDSKETLLHVAAQGGHMDIIRALMEAGCDPCVKNKKSQTP 635
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1006.98.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
| Match Name | E-value | Identity | Description | |
| Ankyrin | 1.130e-77 | 61.04 | repeat domain-containing protein 39 n=1 Tax=Ectoca... | [more] |
| Uncharacterized | 3.520e-32 | 91.43 | protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... | [more] |
| Hypothetical | 1.860e-12 | 38.39 | protein n=1 Tax=Florenciella parvula TaxID=236787 ... | [more] |
| C2H2-type | 4.640e-6 | 38.30 | domain-containing protein n=1 Tax=Blattella german... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 60.5 |
| Seed ortholog evalue | 1.5e-06 |
| Seed eggNOG ortholog | 4792.ETI34834 |
| Preferred name | ankrd53 |
| KEGG ko | ko:K10297,ko:K20032,ko:K21441 |
| KEGG TC | 9.B.37.1,9.B.37.3 |
| EggNOG free text desc. | proteasome regulatory particle assembly |
| EggNOG OGs | COG0666@1,KOG4412@2759 |
| Ec32 ortholog description | Ankyrin repeat-containing domain |
| Ec32 ortholog | Ec-11_001150.3 |
| EC | 2.3.1.225 |
| COG Functional cat. | L |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko03036,ko04121,ko04131 |
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 822 |
| Cds size | 822 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622928198.2940211-CDS-Ecto-sp9_F_contig1006:9890..10064 | 1622928198.2940211-CDS-Ecto-sp9_F_contig1006:9890..10064 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig1006 9891..10064 - |
| 1692277791.651089-CDS-Ecto-sp9_F_contig1006:9890..10064 | 1692277791.651089-CDS-Ecto-sp9_F_contig1006:9890..10064 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig1006 9891..10064 - |
| 1622928198.3089736-CDS-Ecto-sp9_F_contig1006:10966..11139 | 1622928198.3089736-CDS-Ecto-sp9_F_contig1006:10966..11139 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig1006 10967..11139 - |
| 1692277791.6645226-CDS-Ecto-sp9_F_contig1006:10966..11139 | 1692277791.6645226-CDS-Ecto-sp9_F_contig1006:10966..11139 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig1006 10967..11139 - |
| 1622928198.3207076-CDS-Ecto-sp9_F_contig1006:11397..11579 | 1622928198.3207076-CDS-Ecto-sp9_F_contig1006:11397..11579 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig1006 11398..11579 - |
| 1692277791.702438-CDS-Ecto-sp9_F_contig1006:11397..11579 | 1692277791.702438-CDS-Ecto-sp9_F_contig1006:11397..11579 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig1006 11398..11579 - |
| 1622928198.3306472-CDS-Ecto-sp9_F_contig1006:11926..12195 | 1622928198.3306472-CDS-Ecto-sp9_F_contig1006:11926..12195 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig1006 11927..12195 - |
| 1692277791.715181-CDS-Ecto-sp9_F_contig1006:11926..12195 | 1692277791.715181-CDS-Ecto-sp9_F_contig1006:11926..12195 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig1006 11927..12195 - |
| 1622928198.3402321-CDS-Ecto-sp9_F_contig1006:13903..13927 | 1622928198.3402321-CDS-Ecto-sp9_F_contig1006:13903..13927 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig1006 13904..13927 - |
| 1692277791.7261744-CDS-Ecto-sp9_F_contig1006:13903..13927 | 1692277791.7261744-CDS-Ecto-sp9_F_contig1006:13903..13927 | Ectocarpus species9 EcSCA_722f female | CDS | Ecto-sp9_F_contig1006 13904..13927 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1006.98.1 >prot_Ecto-sp9_F_contig1006.98.1 ID=prot_Ecto-sp9_F_contig1006.98.1|Name=mRNA_Ecto-sp9_F_contig1006.98.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=274bp
SDIKGTEQTTVGKIAEGYGDDNEDRRRNQQSHEKVEAGEPSTMVAPEPEN KKIDAVSGERQKLDRRKRRCPVVSVHRYPNNSEDDGEGKEDEGAGKRRSF ARVVMQEDVAGFSHLVQEGTGILDSDGHGWSALHWASSRGSTVLTYGILQ EIKLLREADSSAGEGTDGASNAVAGFLDLRENLGGWTALHLAAIGGHLDV VYMLMEAGCDPRVKDKVGDQPIHCIRRKRTSEGLVKRLRNALLDLSDSEE GSCEENIEPPPRRGSIRERRRYR* back to topmRNA from alignment at Ecto-sp9_F_contig1006:9891..13927- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp9_F_contig1006.98.1 ID=mRNA_Ecto-sp9_F_contig1006.98.1|Name=mRNA_Ecto-sp9_F_contig1006.98.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=4037bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1006:9891..13927- (Ectocarpus species9 EcSCA_722f female) AGTGACATCAAGGGCACGGAACAGGTACCACCGAAGTAGAAGTTACCCAA
AGTTGCTAGAGTTTCGAGGTCCTGGTGTACAAAGAATGTACCAGGTACAA
CAGTACATGTATTAGTAGGATCCTGATCTACAACCTCCTTCTGTAGTAGC
ACCGATATAATACATGATCGACTGGAATCCTACTGTCTGTGTATACTTCT
ATATATTGTAGCGCGCGTGTCGAAATCTAAAAGAGCGGTCGGTATTCTGC
GGATACTACAGACAGTAACATTCCTTCCTACTCACGTAAAGACTTCCAAC
ACATCCCCTTCGACTGCTGTAGTATTATCTCGAACGGATAGTATTTCATT
GATATGTAGTCTAATTCATATCCAACAAATATTGTAGACTACTACCACCT
TGTACTTGATACTACTACTGTGGTAAAAGTTGGTAACATATGCGTACCGA
CTTGTGTGGTTTCTTCTGCGTCCGTTGCTCCATCCGGTCCGCGCGTCAAC
GCTCCAGCGCGGCATCCGGTGTTGGTCCCTTGCTTACGAATTGCGACGAC
ACCATACTTTCGATGGCAGACTACAACACATACCGTTATCGGGGGATACA
TAAATCTGTACGCGGGTGACGTAAGGTACCCCGGGGGGGGGGGGTACTCT
TGTGTTTTGCATGATGCGTTAGCGGTTAGACCATTGACCAAGCGTCCTCG
AGAGGACGGAGCATTGTTCCCACAGGACTGATCACCGATGGTCAATCGTT
CTTTCCTACTTTGCCAAAGAAAGGTGATGGCTAAAAAATGTTATCTATCT
ATCTATCCTATCGATATCACTTCCCGCCTTTTCAACCCACTTCCTATGCC
CCCGTACAACTACCGTCTTCTCCTGGCTATTCCATGCCCCAAACATCNNN
NNNNNNNCTACTTTTCCCAGCTCAGTCATGTACACTTCCCTCTCCTTCTT
GTACAACCGATATTCCGCAACTACATGAACACGGACTTCGCACTCGGAGC
CGCAATCACATTTGAACTTGTCGTCTTCATGGTCTACACCTTCCTAAATC
TTCGGCTACGTTCTCGAAGGCCAATGTCCCCGGTCCTGAATTTGACCTTC
AGCTTGGTCCCTGCATCCATTGGTCCATGTAGGTATTCCTTGAACCCTAT
TCCTTCTTTCAACATTCCGTATACTTGTAGACCCTCCTTGTCCTTGGTTC
TTTGGTTAGTTTCTGTTCCTCTCTCTCGGCAAAAGCAGCAGATATCTTCT
CCTTGAACCCCTCTAGACCTTCCGTTTCCAGCGTACCAACTTCGTAAATT
TCCCCATCAGGTCTGCCCTGACGGCAGCAGTACTTGTGCGCTTGGAGCAT
CCTAGCATGATTTTCGCTGCTTTGATCTGCGCCGCCTCGGGCTCTTTGAC
TACCTTCTTATTTCCTTCCCATACTTGCCCGGCGTATTCTCGCGGCGGTA
CGACTACGCTCTTCAAAACTGTCAACTTGATGCGTGCATCGAGATGCCGG
TTTGCGAGTATTGGGTGTAGTTTCCCTGCTCGAATTGGGTAAGGTGCCCC
GGGGGGTGCCCGAACTGAAGTTACTGCGCTTCCTACAGCAGAACGTTTTT
TATCTACTAGCGTAAACACCACCGTACGTAGTACTGAGACGGTTTTTCAG
CCCGCAACTTGTACCATACGTCATACGATGAAAGGTGGCCGGGTGACGTT
CGACCCCTCTCTGCAATTCCCGTGCGCGCCAGACTACAGTAGGAAAAATA
GCGGAAGGATACGGGGACGACAACGAGGATCGGAGGCGAAACCAGCAGAG
CCATGAAAAGGTAGAAGCAGGAGAACCGAGCACGATGGTCGCGCCCGAGC
CGGAGAACAAGAAGATTGACGCGGTCTCTGGGGAGAGGCAAAAGCTGGAT
CGTCGAAAGCGCCGCTGTCCGGTTGTGAGTGTCCACAGATATCCCAACAA
CAGCGAGGACGACGGAGAGGGGAAAGAAGACGAAGGAGCTGGAAAGAGAA
GGCGAGCCAGCAGTGTTGCCATGTCACTCTTCTACACATCGGTGATGACT
GATCTTTATTTCAGTTTAGAAAGAGTGCGAAATTCTATCGCAATGGCGGA
GAAAATGCTTCATGGTTGCGCAGCTAGGCGCGCCGTTTATGACTAAAAGT
TTAACAGAGGGTCAACCAGCTACAATCGTACCTATTTGTACACTATAGGG
AACCTGTGGGGAACCTCTGCAGCGTCGTCATCTCTGTCCCACCTCGGCTT
GGTTTAGCGTGGGCGTGTCGTGTCAGTCGATTCCTTGTAATGGACACGAC
TTCCACGGGCATCTTCATGTATGTATTAATGACCAATATTCGTTGCAGGT
CCTTCGCGCGAGTTGTCATGCAAGAGGACGTGGCAGGGTTCTCACACCTT
GTTCAAGAGGGTACCGGCATCTTGGATTCTGATGGTCACGGGTGGAGTGC
TCTCCATTGGGCGAGTTCGAGGGGAAGCACTGTCCTAACCTACGGTATCC
TGCAAGAGATAAAGTTGTTGCGGGAAGCAGGTGATGTGATCTCCTCGCTG
CCACGGGATAGCAAGCAACAGTCCTCCTTGAGGGAAATCTTCAGCTGCAC
TGTATACGTCTCAAGAAGGCCCGATCCAACGTTGATTTCAATAGAGCGAG
ATCCCCGCATCGTCGCGAGGATACCTTTTCCAACCTTGACAGGGACTGGA
CCTCTATATCCTCTTTGCTGTCGTCGAAACCAGCGTCGTGTCGTCATCTT
ACCTTGACAGCCTGCTGATCGGACGCATGCGTTTGTAGACTCTTCTGCTG
GCGAAGGGACCGACGGCGCGTCAAACGCGGTCGCCGGCTTCCTTGATTTG
CGGGAAAACCTCGGTGGGTGGACAGCGTTGCACCTCGCTGCAATTGGAGG
ACACCTGGATGTGGTGTATATGTTGATGGAAGCGGGCTGCGATCCTCGAG
TCAAGGACAAAGTGAGCTTCTTGCACAGGAGTTAGACATCGAGTTTGATC
CCGTGCTCAGTATCCCTATCGCTTCTTCTTTGCATCGATGAATCAACGGA
TGATTTTCATGAGTTTTCTATTGATGTCGCTTCCCGCGTTACTAATGTGA
GGCACGTGTTGCTCGGTGCCGATGTCATCCCTGCTTGCAACACAAGGAAT
TGGCACGAAAGTTAAAGTTCGGAGTTGCCGAGAGCACGTACTGCTCGAAA
CGAGGAGCCCCGGCGAGAACAATTTAGAGTCGATTCGACTGGGCGTCAGA
GGGGCAAAGGACGCAAAAAGTATAGAAATGTTCGATGCGATACATCCAAT
CCATCACTCAAGAGAATGCAAACCTCAAGCGGCTGCCTATTTTCTGGCCG
ATTTCGTCCGAACACAACTCTGCCGAGTGTATAGATTGAACAAGGATGTT
CGTTGGTGAGAACGAAGAAAAACAGCGCGTAGGGGAATTTTCTAGACTAG
ACCGTGAGGGTGCCTGACAATCGCGAGCATTCGCAGTGTTATCCAAGTTG
CCCGGCTTCCACACGGGCTCTTGCAAAATTTCGGGGTTGGGTTTAGAACA
TGGGCGTCTTATTCCTACCAAAAACACCATGTACAGTTGTAAATCCTTTC
GCCGCTTGACATCCGGAAGGCCAGGCGCGGACATGTATCCAAGGGTGAGC
ACGGTGCGTATTTGTCTGCACTCGAACGACTCTAGCTTTTCCCTCATTCG
TGGCACTTTTGTGATGCTGATTGCTCGGTCCAATCACTAGTTTTCCTACC
ACTATTATAGCAGCGGACACAAATTTTGTACACACGCGTTGCCACTATAG
GCAAAGTACCTATAATACAGTATGTCGTCCTGAACGCGGCGTGCCACTTT
CTCCTTGTGGCAGGTTGGAGATCAGCCAATCCATTGCATACGGCGCAAGA
GGACATCGGAGGGACTGGTGAAGCGATTACGCAACGCTTTGCTTGATCTA
TCAGATTCAGAGGAGGGCAGCTGCGAGGAGAACATCGAGCCTCCACCCAG
AAGAGGATCCATCAGAGAGCGACGTAGATACCGTTAG back to topCoding sequence (CDS) from alignment at Ecto-sp9_F_contig1006:9891..13927- >mRNA_Ecto-sp9_F_contig1006.98.1 ID=mRNA_Ecto-sp9_F_contig1006.98.1|Name=mRNA_Ecto-sp9_F_contig1006.98.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1644bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1006:9891..13927- (Ectocarpus species9 EcSCA_722f female) AGTGACATCAAGGGCACGGAACAGAGTGACATCAAGGGCACGGAACAGAC TACAGTAGGAAAAATAGCGGAAGGATACGGGGACGACAACGAGGATCGGA GGCGAAACCAGCAGAGCCATGAAAAGGTAGAAGCAGGAGAACCGAGCACG ATGGTCGCGCCCGAGCCGGAGAACAAGAAGATTGACGCGGTCTCTGGGGA GAGGCAAAAGCTGGATCGTCGAAAGCGCCGCTGTCCGGTTGTGAGTGTCC ACAGATATCCCAACAACAGCGAGGACGACGGAGAGGGGAAAGAAGACGAA GGAGCTGGAAAGAGAAGACTACAGTAGGAAAAATAGCGGAAGGATACGGG GACGACAACGAGGATCGGAGGCGAAACCAGCAGAGCCATGAAAAGGTAGA AGCAGGAGAACCGAGCACGATGGTCGCGCCCGAGCCGGAGAACAAGAAGA TTGACGCGGTCTCTGGGGAGAGGCAAAAGCTGGATCGTCGAAAGCGCCGC TGTCCGGTTGTGAGTGTCCACAGATATCCCAACAACAGCGAGGACGACGG AGAGGGGAAAGAAGACGAAGGAGCTGGAAAGAGAAGGTCCTTCGCGCGAG TTGTCATGCAAGAGGACGTGGCAGGGTTCTCACACCTTGTTCAAGAGGGT ACCGGCATCTTGGATTCTGATGGTCACGGGTGGAGTGCTCTCCATTGGGC GAGTTCGAGGGGAAGCACTGTCCTAACCTACGGTATCCTGCAAGAGATAA AGTTGTTGCGGGAAGCAGGTCCTTCGCGCGAGTTGTCATGCAAGAGGACG TGGCAGGGTTCTCACACCTTGTTCAAGAGGGTACCGGCATCTTGGATTCT GATGGTCACGGGTGGAGTGCTCTCCATTGGGCGAGTTCGAGGGGAAGCAC TGTCCTAACCTACGGTATCCTGCAAGAGATAAAGTTGTTGCGGGAAGCAG ACTCTTCTGCTGGCGAAGGGACCGACGGCGCGTCAAACGCGGTCGCCGGC TTCCTTGATTTGCGGGAAAACCTCGGTGGGTGGACAGCGTTGCACCTCGC TGCAATTGGAGGACACCTGGATGTGGTGTATATGTTGATGGAAGCGGGCT GCGATCCTCGAGTCAAGGACAAAACTCTTCTGCTGGCGAAGGGACCGACG GCGCGTCAAACGCGGTCGCCGGCTTCCTTGATTTGCGGGAAAACCTCGGT GGGTGGACAGCGTTGCACCTCGCTGCAATTGGAGGACACCTGGATGTGGT GTATATGTTGATGGAAGCGGGCTGCGATCCTCGAGTCAAGGACAAAGTTG GAGATCAGCCAATCCATTGCATACGGCGCAAGAGGACATCGGAGGGACTG GTGAAGCGATTACGCAACGCTTTGCTTGATCTATCAGATTCAGAGGAGGG CAGCTGCGAGGAGAACATCGAGCCTCCACCCAGAAGAGGATCCATCAGAG AGCGACGTAGATACCGTTAGGTTGGAGATCAGCCAATCCATTGCATACGG CGCAAGAGGACATCGGAGGGACTGGTGAAGCGATTACGCAACGCTTTGCT TGATCTATCAGATTCAGAGGAGGGCAGCTGCGAGGAGAACATCGAGCCTC CACCCAGAAGAGGATCCATCAGAGAGCGACGTAGATACCGTTAG back to top
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