mRNA_Ecto-sp9_F_contig9020.17217.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig9020.17217.1
Unique NamemRNA_Ecto-sp9_F_contig9020.17217.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9020.17217.1 vs.
Match: Light (harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q6_ECTSI)

HSP 1 Score: 413 bits (1061), Expect = 1.990e-145
Identity = 215/221 (97.29%), Postives = 218/221 (98.64%), Query Frame = 1 
Query:    1 MVATQLFLGSAATLIASSAAFVAPMAVRSAAPASSSSAALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPDDEEALDVMKTKELNNGRLAMIGIAGMLVQELVNPADILG 663
            MVATQLFLGSAATLIASS AFVAPMAVRSAAPASSSSA LKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGV+VAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKP+DE ALDVMKTKELNNGRLAMIGIAGMLVQEL+NPADILG
Sbjct:    1 MVATQLFLGSAATLIASSTAFVAPMAVRSAAPASSSSA-LKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVLVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPEDEAALDVMKTKELNNGRLAMIGIAGMLVQELINPADILG 220
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9020.17217.1 vs.
Match: Light (harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Q9_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 1.890e-128
Identity = 191/220 (86.82%), Postives = 206/220 (93.64%), Query Frame = 1 
Query:    1 MVATQLFLGSAATLIASSAAFVAPMAVRSAAPASSSSAALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPDDEEALDVMKTKELNNGRLAMIGIAGMLVQELVNPADIL 660
            MVA+Q+FLG+AA LIASS AFVAP+AVRSAAPAS++SA LKMSAGSDYVATLPGAPF DGKIFDPL+LSDGA P DIKKWREAEIKHGRVAMLASLG++VAE+YHPLFMG D+IGPA+ HFQEISAQ+PEFW FSLLGMAFIEYNTIMTAF+TPSAVTGEGGLKEDY+PGDLGFDPLNLKPD E ALDVMKTKELNNGRLAMIGIAGML QELVN  DIL
Sbjct:    1 MVASQMFLGTAAALIASSTAFVAPVAVRSAAPASAASA-LKMSAGSDYVATLPGAPFSDGKIFDPLSLSDGAAPGDIKKWREAEIKHGRVAMLASLGILVAEEYHPLFMGKDFIGPAIIHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDGEAALDVMKTKELNNGRLAMIGIAGMLAQELVNGQDIL 219
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9020.17217.1 vs.
Match: Light (harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S1_ECTSI)

HSP 1 Score: 360 bits (925), Expect = 1.100e-124
Identity = 185/218 (84.86%), Postives = 201/218 (92.20%), Query Frame = 1 
Query:   10 TQLFLGSAATLIASSAAFVAPMAVRSAAPASSSSAALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPDDEEALDVMKTKELNNGRLAMIGIAGMLVQELVNPADILG 663
            + +FLG+AATLIASS AFVAPMAVRSAAPASS+SA LKMSAGSDYVATLPGAPFGDGKIFDPL LSDGA+P +IK WREAEIKHGRVAMLA++GVIVAEQYHPLFMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAFIEYNTI  A+  PS VTGEGGL+++Y PGDLGFDPLNLKP D+  L+ M+TKELNNGRLAMIGIAGMLVQELVNPADILG
Sbjct:    5 SNMFLGTAATLIASSTAFVAPMAVRSAAPASSASA-LKMSAGSDYVATLPGAPFGDGKIFDPLELSDGAEPGEIKLWREAEIKHGRVAMLATVGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTITKAYAEPSPVTGEGGLRDEYSPGDLGFDPLNLKPKDQAGLEKMQTKELNNGRLAMIGIAGMLVQELVNPADILG 221
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9020.17217.1 vs.
Match: Light (harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S0_ECTSI)

HSP 1 Score: 320 bits (820), Expect = 9.650e-109
Identity = 165/218 (75.69%), Postives = 190/218 (87.16%), Query Frame = 1 
Query:   10 TQLFLGSAATLIASSAAFVAPMAVRSAAPASSSSAALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPDDEEALDVMKTKELNNGRLAMIGIAGMLVQELVNPADILG 663
            + +FLG+AATLIASSAAFV PMAVRSAAPASS+SA LKMSAG+DY+ATLPGA   +GKIFD L L+DGADP +IK WREAEIKHGRVAMLA++GV+VAEQYHP FMGPDYIGPAVDHFQEI+A++P+FW +SLLGMAFIEYNTI  A+  PS VTGEGGL+++Y PGDLGFDP  +KP D+  L+ M+ KELNNGRLAMIGI GMLVQELVN  DILG
Sbjct:    5 SNMFLGTAATLIASSAAFVTPMAVRSAAPASSASA-LKMSAGTDYLATLPGA---NGKIFDLLELADGADPGEIKLWREAEIKHGRVAMLATVGVVVAEQYHPFFMGPDYIGPAVDHFQEITAKFPQFWAYSLLGMAFIEYNTIKKAYAEPSPVTGEGGLRDEYSPGDLGFDPAKIKPKDQAGLEKMQNKELNNGRLAMIGIVGMLVQELVNGQDILG 218
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9020.17217.1 vs.
Match: Light (harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7S5_ECTSI)

HSP 1 Score: 311 bits (796), Expect = 2.030e-105
Identity = 149/161 (92.55%), Postives = 154/161 (95.65%), Query Frame = 1 
Query:  181 KIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPDDEEALDVMKTKELNNGRLAMIGIAGMLVQELVNPADILG 663
            +IFDPL LSDGA P DIKKWREAEIKHGRVAMLASLGVIVAEQYHP FMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAF+EYNTIMTAF+TPSAVTGEGGLKEDY+PGDLGFDPLNLKPDDE ALDVMKTKELNNGRLAMIGIAGML QELVNPADILG
Sbjct:   36 QIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFVEYNTIMTAFDTPSAVTGEGGLKEDYIPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 196
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9020.17217.1 vs.
Match: LHCP (protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K8D0_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 1.020e-104
Identity = 171/221 (77.38%), Postives = 178/221 (80.54%), Query Frame = 1 
Query:    1 MVATQLFLGSAATLIASSAAFVAPMAVRSAAPASSSSAALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPDDEEALDVMKTKELNNGRLAMIGIAGMLVQELVNPADILG 663
            MVA+Q+F+G+AATLIASS AFVAPMAVRS    + SS  LKMSAGSDYVATLPGAPF DGKIFDPL LSDGA P DIKKWREAEIKHGRVAMLASLGVIVAE                            FW FSLLGMAFIEYNTIMTAF+TPSAVTGEGGLKEDY+PGDLGFDPLNLKPDDE ALDVMKTKELNNGRLAMIGIAGML QELVNPADILG
Sbjct:    1 MVASQMFIGTAATLIASSTAFVAPMAVRSV-TTTPSSPGLKMSAGSDYVATLPGAPFSDGKIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAE----------------------------FWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 192
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9020.17217.1 vs.
Match: LHCP (protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWB4_9PHAE)

HSP 1 Score: 313 bits (802), Expect = 1.740e-103
Identity = 196/392 (50.00%), Postives = 207/392 (52.81%), Query Frame = 1 
Query:    1 MVATQLFLGSAATLIASSAAFVAPMAVRSAAPASSSSAALKMSAGSDYVATLPGAPFGDGK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPDDEEALDVMKTKELNNGRLAMIGIAGMLVQELVNPADILG 663
            MVA+Q+F+G+AATLIASS AFVAP+AVRS A  + SS++L MSAGSDYVATLPGAPF DGK                                                                                                                                                                           IFDPL LSDGA P DIKKWREAEIKHGRVAMLASLGVIVAEQYHP FMGPDYIGPAVDHFQEISAQ+PEFW FSLLGMAFIEYNTIMTAF+TPSAVTGEGGLKEDY+PGDLGFDPLNLKPDDE ALDVMKTKELNNGRLAMIGIAGML QELVNPADILG
Sbjct:    1 MVASQMFIGTAATLIASSTAFVAPVAVRSVAITTPSSSSLMMSAGSDYVATLPGAPFSDGKQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQSFPSRLMKSIKFINNEYPIHDGEIGNGQMNFSRCHICVRSYPLGQIVSPVAVFDHRCPNALVPQIFDPLGLSDGAAPGDIKKWREAEIKHGRVAMLASLGVIVAEQYHPFFMGPDYIGPAVDHFQEISAQFPEFWAFSLLGMAFIEYNTIMTAFDTPSAVTGEGGLKEDYMPGDLGFDPLNLKPDDEAALDVMKTKELNNGRLAMIGIAGMLAQELVNPADILG 392
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9020.17217.1 vs.
Match: Light (harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B4_ECTSI)

HSP 1 Score: 271 bits (692), Expect = 1.680e-88
Identity = 137/218 (62.84%), Postives = 169/218 (77.52%), Query Frame = 1 
Query:   10 TQLFLGSAATLIASSAAFVAPMAVRSAAPASSSSAALKMSAGSDYVATLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPDDEEALDVMKTKELNNGRLAMIGIAGMLVQELVNPADILG 663
            T   +G A+   AS  AF+ P     +A  +S++A  +MSAGSDYV+TLPGAPF DGK++DP+ LS  ADP DIKKWREAEIKHGRVAMLAS+GV+VAE +HPLF+GPDYIGPA+ HF+EI+A++P+FW  +LL +A++EY  I   F     VTGEGG++ DYVPGDLGFDPL L P+DE  L+VMKTKELN+GRLAMIGI GM+VQELV P  I G
Sbjct:   56 TGALVGMASWCFASCEAFIVPTPTTLSARPTSTAA--RMSAGSDYVSTLPGAPFADGKVWDPVGLSSEADPEDIKKWREAEIKHGRVAMLASVGVLVAENFHPLFLGPDYIGPAIFHFEEITARFPQFWALTLLAIAWLEYRQINIGFAELDPVTGEGGMRLDYVPGDLGFDPLGLAPEDEHELNVMKTKELNHGRLAMIGITGMIVQELVRPLPIFG 271
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9020.17217.1 vs.
Match: Light (harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q7_ECTSI)

HSP 1 Score: 265 bits (678), Expect = 9.950e-88
Identity = 126/160 (78.75%), Postives = 141/160 (88.12%), Query Frame = 1 
Query:  181 KIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPDDEEALDVMKTKELNNGRLAMIGIAGMLVQELVNPADIL 660
            KIFDPL L+DGA+  DIK WREAEIKHGRVAMLASLGV+VAE+YHP FMGPDYIGPAVDHFQEISA++PEFW FSLL +A IEYNTI  A+  PS VTGEGGL+++Y PGDLGFDPLNLKP D+ AL+ M+TKELNNGRLAMIGIAG LVQELVNP +IL
Sbjct:   15 KIFDPLGLADGAEVGDIKLWREAEIKHGRVAMLASLGVLVAEEYHPFFMGPDYIGPAVDHFQEISARFPEFWAFSLLALALIEYNTITKAYAEPSFVTGEGGLRDEYSPGDLGFDPLNLKPTDQTALETMQTKELNNGRLAMIGIAGTLVQELVNPTNIL 174
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9020.17217.1 vs.
Match: Light (harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG7_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 2.340e-79
Identity = 135/224 (60.27%), Postives = 170/224 (75.89%), Query Frame = 1 
Query:    1 MVATQLFLGSAATLIASSAAFVAPMAV-RSAAPASSSSAALKMSAGSDYVATLPGAPFG---DGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVIVAEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTAFETPSAVTGEGGLKEDYVPGDLGFDPLNLKPDDEEALDVMKTKELNNGRLAMIGIAGMLVQELVNPADIL 660
            MV +QLFLG+AATLIASSAAFVAP+A  RS+    ++S+  KM+AGSDY A+LPGAPFG   +GK FDP  L+   DP  IKKWREAE+KHGRV+MLA++G++V+E +HPLFMGP YIGPAV+H Q+I+  YP FWV SL  +AFIE  TI  A+ T S VTG G LK +Y PGDLGFDPL L P D E   +++++EL+ GR AMIG+ GM+VQE+V+   IL
Sbjct:    1 MVTSQLFLGTAATLIASSAAFVAPIAAPRSSIARVAASSTPKMTAGSDYAASLPGAPFGMAAEGKYFDPAGLATNQDPETIKKWREAELKHGRVSMLAAVGILVSEVFHPLFMGPAYIGPAVEHAQQIATVYPLFWVASLGMIAFIEGQTIKDAWGTVSPVTGVGNLKTEYYPGDLGFDPLGLAPKDGEDFRLIQSQELDLGRYAMIGVLGMIVQEVVDGKGIL 224
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9020.17217.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Light1.990e-14597.29harvesting complex protein n=2 Tax=Ectocarpus TaxI... [more]
Light1.890e-12886.82harvesting complex protein n=2 Tax=Ectocarpus TaxI... [more]
Light1.100e-12484.86harvesting complex protein n=1 Tax=Ectocarpus sili... [more]
Light9.650e-10975.69harvesting complex protein n=1 Tax=Ectocarpus sili... [more]
Light2.030e-10592.55harvesting complex protein n=1 Tax=Ectocarpus sili... [more]
LHCP1.020e-10477.38protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more]
LHCP1.740e-10350.00protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Light1.680e-8862.84harvesting complex protein n=1 Tax=Ectocarpus sili... [more]
Light9.950e-8878.75harvesting complex protein n=1 Tax=Ectocarpus sili... [more]
Light2.340e-7960.27harvesting complex protein n=2 Tax=Ectocarpus TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9020contigEcto-sp9_F_contig9020:2160..4948 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score414.8
Seed ortholog evalue2.5e-113
Seed eggNOG ortholog2880.D7G7Q6
KEGG koko:K08914
KEGG Pathwayko00196,ko01100,map00196,map01100
EggNOG free text desc.Chlorophyll A-B binding protein
EggNOG OGs2BEWM@1,2S15M@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00194
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionLight harvesting complex protein
Ec32 orthologEc-06_000750.1
Exons4
Model size666
Cds size666
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9020.17217.1prot_Ecto-sp9_F_contig9020.17217.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig9020 2160..4948 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930967.9621043-CDS-Ecto-sp9_F_contig9020:2159..24351622930967.9621043-CDS-Ecto-sp9_F_contig9020:2159..2435Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9020 2160..2435 -
1692278972.1588519-CDS-Ecto-sp9_F_contig9020:2159..24351692278972.1588519-CDS-Ecto-sp9_F_contig9020:2159..2435Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9020 2160..2435 -
1622930967.979055-CDS-Ecto-sp9_F_contig9020:3974..40581622930967.979055-CDS-Ecto-sp9_F_contig9020:3974..4058Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9020 3975..4058 -
1692278972.1786425-CDS-Ecto-sp9_F_contig9020:3974..40581692278972.1786425-CDS-Ecto-sp9_F_contig9020:3974..4058Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9020 3975..4058 -
1622930967.9993174-CDS-Ecto-sp9_F_contig9020:4248..43711622930967.9993174-CDS-Ecto-sp9_F_contig9020:4248..4371Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9020 4249..4371 -
1692278972.19237-CDS-Ecto-sp9_F_contig9020:4248..43711692278972.19237-CDS-Ecto-sp9_F_contig9020:4248..4371Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9020 4249..4371 -
1622930968.0156436-CDS-Ecto-sp9_F_contig9020:4765..49481622930968.0156436-CDS-Ecto-sp9_F_contig9020:4765..4948Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9020 4766..4948 -
1692278972.202309-CDS-Ecto-sp9_F_contig9020:4765..49481692278972.202309-CDS-Ecto-sp9_F_contig9020:4765..4948Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig9020 4766..4948 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig9020.17217.1

>prot_Ecto-sp9_F_contig9020.17217.1 ID=prot_Ecto-sp9_F_contig9020.17217.1|Name=mRNA_Ecto-sp9_F_contig9020.17217.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=222bp
MVATQLFLGSAATLIASSAAFVAPMAVRSAAPASSSSAALKMSAGSDYVA
TLPGAPFGDGKIFDPLNLSDGADPADIKKWREAEIKHGRVAMLASLGVIV
AEQYHPLFMGPDYIGPAVDHFQEISAQYPEFWVFSLLGMAFIEYNTIMTA
FETPSAVTGEGGLKEDYVPGDLGFDPLNLKPDDEEALDVMKTKELNNGRL
AMIGIAGMLVQELVNPADILG*
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mRNA from alignment at Ecto-sp9_F_contig9020:2160..4948-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig9020.17217.1 ID=mRNA_Ecto-sp9_F_contig9020.17217.1|Name=mRNA_Ecto-sp9_F_contig9020.17217.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=2789bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9020:2160..4948- (Ectocarpus species9 EcSCA_722f female)
ATGGTCGCCACCCAGCTGTTCCTCGGCTCTGCCGCCACCCTCATCGCCTC
CTCGGCTGCCTTCGTCGCACCGATGGCTGTGCGATCCGCTGCACCCGCTT
CCTCTTCTTCTGCGGCCCTCAAGATGAGCGCTGGATCCGACTACGTCGCA
ACCCTGCCCGGAGCTCCCTTCGGTGATGGAAAGGTGAGTGCATTGAGCAG
CAACGCAATTGCTACCACCGTAGCTGCTGTTGCGTGGCCACCTAGTGCCA
TCGCTATGAGAACGAGTTACGTAGAGCTGTGTGACGTCGACCGCAGGCTG
AGAAAAAAGTGTCCGCTCGGATGGATTTCTCTGACAGAGCAAAACCAACA
AACGTCGCACACGTAAGCAACGATCGATTCGAGATCCGCCGCCGTATCGG
GACATGCATACGCACTTGCGGTCTTACCTCGCCACGTGGTGGTGCAGCAT
ATGGCGTGCTGCCACACAGACTCTTGGTGCGTCCTTCTGCGCTACTGCCT
CGAATCGAACTCGTGCCCCCCCGTTTGTTCCACGACGGCTGACGGCTGAC
CGTTCATCGAACCGCCCGCCACGCCAGATCTTCGACCCCCTCAACCTCTC
GGACGGGGCTGACCCCGCCGACATCAAGAAGTGGCGCGAGGCCGAGATCA
AGCACGGGCGTGTGGCCATGCTCGCGTCCCTCGGTGTCATCGTCGCGGAG
GTGAGGCTCTGCTCCGCACACGTGTGCAGTAGCAGCTCGTCAAGCACAGC
GTGCTCCGTGTGTGGGATGTTGCTCCTTTTCTTCTCGAAGCAGCCTCGAT
TTTCATATTGCTCATGTTTTTGGTCCCTCGAGCTAACCAACTCTATCTCC
CGTCTCCCTCCCTTTGCTTTTTTGCCCTTGCACACTCTAGCAATACCACC
CTCTCTTCATGGGCCCCGACTACATCGGCCCCGCCGTGGACCACTTCCAG
GAGATCAGCGCGCAGTACCCCGAGGTGAGCGCGCTCAAACACAGACACAG
AACTCTCCGCGATGGAACAATCTCCGTCCACTGGTGGCGAACAAAAACTT
TTTTTTTTCGATCTGTCATTTCCCGTTACGCTTTTCTGTGAAATCTATCT
GGGGGTGCAATCTTCCGCTGGCGTTGCCATTGCTCTACTCTCACGTCGAT
GAGCGTTACACGGGCGAAAAGAAGACGCCCTTCCGCCAGTGTCATGAGAA
TCTGAGCGAGCGAACAGTCTTTTTGTGTGCGGTGGTCGACAGGTCAGACG
GGTGCATAAGCGAGTGCGTCAGAGTGGTCCAGATGATGACGTCGGTGTGC
GTGTGTGGGCGTCGCGTCGACGTGTCAGTAGATTGGAAGACCCAAATGAC
TCGAGTCTAGCCCAAGTGAATCGTGTCTGGTTGACAGGTAGTAGGGAGGG
ATGATGTGGCATTTCTACTGCCGGTAGAGAACAGAAGCAGCGGCAGTGGT
GCCGGCCCGCTCGTAGTAAATACTGCTGTTCAGGAGACTCGTCTTAGTCT
TACCCATGGCATGGTACAAGATACTTGGTAAATAGAGAAGCATCGAAAGT
CGAGGCTTATGTTTTTGTTTTTGGAAAAGGAAAGGGAGACTGTAGAGCTA
ACTCAGTCGCCGTCAACACACTGCTGTTTGCGCATTGCACATATCCTACT
CGGCCGGTAGGAATGACCTGTCCTCCATAGTTTTGAGACATTTAATAATA
AATTTTGCAAAAAATACCACATCTACTTTTAGATATGTACGTACGCGCGC
GACCCCGCTTGGAAGGCATCGTGAAAAGCCCGATTACTAATATTATGTCA
TGAGCGTTATCAATAGCCTATAGAGCGTGGTCGCGATGTGTTCCTCCTAT
TGCACGAGGACCACCGGAGCGAAAACATGCGCGCTATTGAAATGCGCAAT
AACCTCCCTACTTGTAGTTACATGCAGTTTTTTCTTGTCATCACATCTAC
GGTATATGCATGCATACTTTGGAGAGAAAGGAAAGAGGCCCACCCGAACG
TCTTCGCCAAAACCAAAACAATAGTAATCACCGCGGACAGCCCTGCCTGG
TGTGTCGTTTTCTTCATATGTTGTGTTGAAAATAGAACAGATATTGATTG
TTGTGGTCAAAACGTTTTTCACGATGATGATGAATCATGAGATGAGATGG
TGCTCGGACAAAGCGTACGAACACTAGCTCTGGTTTGGTCGAGTCTCGCG
GGTGTACGATGTATTGTGACCCAATCCTGCAGTACTAACCTGTACGCTAC
AGCATCTTGGTTGTTTCGGGTACATTGTACTTTATATAGCCCCTTTCCTG
TCACAAACGGACAAACGGGAACGAATGTGTTCCTCGAACCTGATGTTCCT
CGTCATTCATACCAATGCATTTCCTCCTCGCTCAAGGTACAATCGAACCT
ACCTGCTCTTCTTCTATTTAACATGTTGATGTACGCGGACTGCCGAACTA
AGCACATCATATCATCTGTATCCCCACATCGCCGATGCACCCCTGACGCT
CGCTTCGCCACAGTTCTGGGTGTTCTCCCTCCTGGGTATGGCCTTCATCG
AGTACAACACCATCATGACCGCCTTCGAGACCCCCAGCGCTGTGACCGGC
GAGGGCGGCCTGAAGGAAGACTACGTCCCGGGAGACCTCGGCTTCGACCC
CCTCAACCTCAAGCCCGACGACGAGGAGGCTCTGGACGTGATGAAGACCA
AGGAGCTCAACAACGGCCGCCTGGCCATGATCGGCATCGCCGGCATGCTG
GTCCAGGAGCTGGTGAACCCGGCCGACATCCTCGGCTAA
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig9020:2160..4948-

>mRNA_Ecto-sp9_F_contig9020.17217.1 ID=mRNA_Ecto-sp9_F_contig9020.17217.1|Name=mRNA_Ecto-sp9_F_contig9020.17217.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1332bp|location=Sequence derived from alignment at Ecto-sp9_F_contig9020:2160..4948- (Ectocarpus species9 EcSCA_722f female)
ATGGTCGCCACCCAGCTGTTCCTCGGCTCTGCCGCCACCCTCATCGCCTC
CTCGGCTGCCTTCGTCGCACCGATGGCTGTGCGATCCGCTGCACCCGCTT
CCTCTTCTTCTGCGGCCCTCAAGATGAGCGCTGGATCCGACTACGTCGCA
ACCCTGCCCGGAGCTCCCTTCGGTGATGGAAAGATGGTCGCCACCCAGCT
GTTCCTCGGCTCTGCCGCCACCCTCATCGCCTCCTCGGCTGCCTTCGTCG
CACCGATGGCTGTGCGATCCGCTGCACCCGCTTCCTCTTCTTCTGCGGCC
CTCAAGATGAGCGCTGGATCCGACTACGTCGCAACCCTGCCCGGAGCTCC
CTTCGGTGATGGAAAGATCTTCGACCCCCTCAACCTCTCGGACGGGGCTG
ACCCCGCCGACATCAAGAAGTGGCGCGAGGCCGAGATCAAGCACGGGCGT
GTGGCCATGCTCGCGTCCCTCGGTGTCATCGTCGCGGAGATCTTCGACCC
CCTCAACCTCTCGGACGGGGCTGACCCCGCCGACATCAAGAAGTGGCGCG
AGGCCGAGATCAAGCACGGGCGTGTGGCCATGCTCGCGTCCCTCGGTGTC
ATCGTCGCGGAGCAATACCACCCTCTCTTCATGGGCCCCGACTACATCGG
CCCCGCCGTGGACCACTTCCAGGAGATCAGCGCGCAGTACCCCGAGCAAT
ACCACCCTCTCTTCATGGGCCCCGACTACATCGGCCCCGCCGTGGACCAC
TTCCAGGAGATCAGCGCGCAGTACCCCGAGTTCTGGGTGTTCTCCCTCCT
GGGTATGGCCTTCATCGAGTACAACACCATCATGACCGCCTTCGAGACCC
CCAGCGCTGTGACCGGCGAGGGCGGCCTGAAGGAAGACTACGTCCCGGGA
GACCTCGGCTTCGACCCCCTCAACCTCAAGCCCGACGACGAGGAGGCTCT
GGACGTGATGAAGACCAAGGAGCTCAACAACGGCCGCCTGGCCATGATCG
GCATCGCCGGCATGCTGGTCCAGGAGCTGGTGAACCCGGCCGACATCCTC
GGCTAATTCTGGGTGTTCTCCCTCCTGGGTATGGCCTTCATCGAGTACAA
CACCATCATGACCGCCTTCGAGACCCCCAGCGCTGTGACCGGCGAGGGCG
GCCTGAAGGAAGACTACGTCCCGGGAGACCTCGGCTTCGACCCCCTCAAC
CTCAAGCCCGACGACGAGGAGGCTCTGGACGTGATGAAGACCAAGGAGCT
CAACAACGGCCGCCTGGCCATGATCGGCATCGCCGGCATGCTGGTCCAGG
AGCTGGTGAACCCGGCCGACATCCTCGGCTAA
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