mRNA_Ecto-sp9_F_contig11730.1440.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Match: Integrase (n=2 Tax=Roseovarius TaxID=74030 RepID=A0A176EW67_9RHOB) HSP 1 Score: 619 bits (1597), Expect = 1.930e-222 Identity = 286/357 (80.11%), Postives = 325/357 (91.04%), Query Frame = 1
Query: 16 MPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTRRILIGRYPTITASAARQTALSFALEMSRGAGKHIQIGAPTLLEATEVYLARPKLRSETHKAGVRQQFELHLKDWLRLPLDDITKSMAVQRHREMAKSPSGANHVLKAFRTVWNHARRTYDLPESPTSAIEWYEERPDGRIIDDLLAWKRRVGGLGNPIHAVFFELLLYTGFRKTEAMTIEWKNVHEDHIHLPVTKNGRSFDLPIVQRHHEILAPLQGLSRTWVFPSPKSPSGHLNAPTRLEWSPHAHRRTFATIAMETGVLEEVVGRLLNHTPLNLTGQRYVRPSLEALRPAMQQTCDELDRRLG 1086
MPKLTETY KKLP GT+K+WD+E+KGLV+FVGK++KTWYFQKDVGG+T+R+LIGRYPTITA ARQTAL FALEMSRGAGKHIQIGAPTL +A EVYLARPKLRS+ HK VR QFE HLKDW+ LPLD+ITKSMAV+RHR++AKSPS ANH L+ FR+VWNHARR +DLPESPT+AIEWYEERP+GR+I+DL+ WK+R+ GL NPIH VFF+L+LYTG RKTEA+T+EWKNVH+D IHLPVTKNGRSFDLPIVQRHHEILAP++GLSR WVFPSPKSPSGH+ P R+EWSPHAHRRTFAT+AME G+LEEVVGRLLNHTPLNLTGQRYVRPSL+ALRPAMQ TCDELDRRLG
Sbjct: 1 MPKLTETYVKKLPTVVNGTKKYWDSEIKGLVVFVGKRSKTWYFQKDVGGKTQRVLIGRYPTITAQTARQTALGFALEMSRGAGKHIQIGAPTLSDAMEVYLARPKLRSDVHKESVRTQFENHLKDWMGLPLDEITKSMAVERHRQLAKSPSTANHTLRYFRSVWNHARRVHDLPESPTNAIEWYEERPNGRVIEDLVEWKKRIDGLYNPIHGVFFKLMLYTGLRKTEALTLEWKNVHDDRIHLPVTKNGRSFDLPIVQRHHEILAPVEGLSRKWVFPSPKSPSGHVQGPQRIEWSPHAHRRTFATVAMEAGILEEVVGRLLNHTPLNLTGQRYVRPSLDALRPAMQTTCDELDRRLG 357
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Match: integrase (family protein n=1 Tax=Roseovarius aestuariivivens TaxID=1888910 RepID=UPI0010813CEF) HSP 1 Score: 588 bits (1516), Expect = 5.050e-210 Identity = 274/357 (76.75%), Postives = 310/357 (86.83%), Query Frame = 1
Query: 16 MPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTRRILIGRYPTITASAARQTALSFALEMSRGAGKHIQIGAPTLLEATEVYLARPKLRSETHKAGVRQQFELHLKDWLRLPLDDITKSMAVQRHREMAKSPSGANHVLKAFRTVWNHARRTYDLPESPTSAIEWYEERPDGRIIDDLLAWKRRVGGLGNPIHAVFFELLLYTGFRKTEAMTIEWKNVHEDHIHLPVTKNGRSFDLPIVQRHHEILAPLQGLSRTWVFPSPKSPSGHLNAPTRLEWSPHAHRRTFATIAMETGVLEEVVGRLLNHTPLNLTGQRYVRPSLEALRPAMQQTCDELDRRLG 1086
MPKLTET+A+K+P QGT KHWDNEVKGLVLFVGKK+KTWYFQKDVGGQTRRILIGRYP I+A AARQTAL +ALE RGAGK +QIGAPTL A E YLARPKLRS+THK VRQQFELHLKDWLRLPLD+ITK+M +RHR MA +PS ANH LK FR+VWNHARR YDLPESPT AIEW+EERP+G II D AW+R + L NPIHAVF+ELLL+TG RKTEA+T++WK+VHEDH+HLP+TKNGRSFDLPI+Q HHEILAP+QGL RTWVFPSPKSPSGH+ P R++WSPHAHRRTFAT+AME GVLEEVVGRLLNHTP ++TGQRY +PSL+ALRPAM+ TC L RLG
Sbjct: 1 MPKLTETFARKVPPTKQGTAKHWDNEVKGLVLFVGKKSKTWYFQKDVGGQTRRILIGRYPVISADAARQTALGYALEWGRGAGKKVQIGAPTLRVAMEAYLARPKLRSDTHKISVRQQFELHLKDWLRLPLDEITKAMVAERHRSMAATPSAANHTLKYFRSVWNHARRIYDLPESPTMAIEWFEERPNGSIISDFRAWRRTIDELYNPIHAVFYELLLFTGLRKTEALTLQWKHVHEDHLHLPMTKNGRSFDLPILQLHHEILAPVQGLHRTWVFPSPKSPSGHVEGPQRIKWSPHAHRRTFATVAMEAGVLEEVVGRLLNHTPQSITGQRYTKPSLDALRPAMETTCKALQARLG 357
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Match: Integrase (n=1 Tax=Maritimibacter sp. 55A14 TaxID=2174844 RepID=A0A2U2CH41_9RHOB) HSP 1 Score: 585 bits (1508), Expect = 6.690e-209 Identity = 272/357 (76.19%), Postives = 307/357 (85.99%), Query Frame = 1
Query: 16 MPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTRRILIGRYPTITASAARQTALSFALEMSRGAGKHIQIGAPTLLEATEVYLARPKLRSETHKAGVRQQFELHLKDWLRLPLDDITKSMAVQRHREMAKSPSGANHVLKAFRTVWNHARRTYDLPESPTSAIEWYEERPDGRIIDDLLAWKRRVGGLGNPIHAVFFELLLYTGFRKTEAMTIEWKNVHEDHIHLPVTKNGRSFDLPIVQRHHEILAPLQGLSRTWVFPSPKSPSGHLNAPTRLEWSPHAHRRTFATIAMETGVLEEVVGRLLNHTPLNLTGQRYVRPSLEALRPAMQQTCDELDRRLG 1086
MPKLTETY +KLP A G QKHWD+E+KGL LFVGK++KTWYFQKDVGG+T+RI+IGRYP ITA ARQTA+ +ALEMSRGAGK IQIGAPTL A E YLARPKLRSETH+ G+RQQF+ HLKDWLRLPLD+ITKSM RHR MAK+PSGANHVLK FRTVWNHARRTYDLPESPT AIEWYEE+P G II+DL W+R V L NPIH VF+EL+L+TG RKTEA+T+EWKNVH+ H+H P+TKNGRSFDLPI+Q HHEILAPL+GL R WVFPSPKS G L +P RLEWSPHAHRRTFAT+AME GVLEEVVGRLLNHTPL++TGQRY RPSL+ALRPAM+ C EL RR+
Sbjct: 1 MPKLTETYVRKLPAAKSGAQKHWDSEIKGLALFVGKRSKTWYFQKDVGGRTQRIMIGRYPIITAETARQTAMGYALEMSRGAGKQIQIGAPTLEAAMESYLARPKLRSETHRVGMRQQFDKHLKDWLRLPLDEITKSMVADRHRSMAKTPSGANHVLKYFRTVWNHARRTYDLPESPTMAIEWYEEKPSGAIIEDLPRWRRAVDDLYNPIHQVFYELILFTGLRKTEALTLEWKNVHDGHLHFPITKNGRSFDLPILQIHHEILAPLRGLDRKWVFPSPKSSKGRLTSPERLEWSPHAHRRTFATVAMEAGVLEEVVGRLLNHTPLSITGQRYTRPSLDALRPAMEMACGELSRRIA 357
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Match: integrase (family protein n=1 Tax=Marimonas lutisalis TaxID=2545756 RepID=UPI0010F71EE2) HSP 1 Score: 582 bits (1499), Expect = 1.630e-207 Identity = 267/355 (75.21%), Postives = 313/355 (88.17%), Query Frame = 1
Query: 16 MPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTRRILIGRYPTITASAARQTALSFALEMSRGAGKHIQIGAPTLLEATEVYLARPKLRSETHKAGVRQQFELHLKDWLRLPLDDITKSMAVQRHREMAKSPSGANHVLKAFRTVWNHARRTYDLPESPTSAIEWYEERPDGRIIDDLLAWKRRVGGLGNPIHAVFFELLLYTGFRKTEAMTIEWKNVHEDHIHLPVTKNGRSFDLPIVQRHHEILAPLQGLSRTWVFPSPKSPSGHLNAPTRLEWSPHAHRRTFATIAMETGVLEEVVGRLLNHTPLNLTGQRYVRPSLEALRPAMQQTCDELDRR 1080
MPKLTETYA+K+PQ GT KHWDNEVKGLVLFVGKKAKTWYFQKDVGGQT+R+LIGR+P I+A+AAR+TAL FALE RGAGKHIQIGAPTL A E YLARPKLRS+ H+ VRQQF LHLKDW+ LPLD+ITK+M V+RHR MAK PS ANH LK FRTVWNHARR +DLPESPT AIEWYEE+P G+II+DL+ W++ V GL NPIH VF+EL+L+TG RKTEA+T+EWKNV EDHIHLP+TKNGRSFDLPI+Q HHEILAP++GLSR WVFPSPKS +G++ P +++WSPHAHRRTFAT+AME+G+LEE+VGRLLNHTPL++TGQRYV+PSL+ALRP+M+ CDEL RR
Sbjct: 1 MPKLTETYARKVPQTKNGTDKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTKRVLIGRFPVISAAAARETALGFALEWGRGAGKHIQIGAPTLEAAMEGYLARPKLRSDAHRLSVRQQFGLHLKDWMGLPLDEITKAMVVERHRSMAKYPSAANHTLKYFRTVWNHARRIHDLPESPTMAIEWYEEQPSGQIIEDLVEWRKAVDGLYNPIHKVFYELILFTGLRKTEALTLEWKNVREDHIHLPMTKNGRSFDLPILQHHHEILAPMRGLSRQWVFPSPKSKTGYVTGPEKIQWSPHAHRRTFATVAMESGILEEIVGRLLNHTPLSITGQRYVKPSLDALRPSMETVCDELRRR 355
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Match: Phage (integrase family protein n=2 Tax=Vannielia litorea TaxID=1217970 RepID=A0A1N6GII8_9RHOB) HSP 1 Score: 580 bits (1494), Expect = 1.260e-206 Identity = 267/360 (74.17%), Postives = 314/360 (87.22%), Query Frame = 1
Query: 4 KADKMPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTRRILIGRYPTITASAARQTALSFALEMSRGAGKHIQIGAPTLLEATEVYLARPKLRSETHKAGVRQQFELHLKDWLRLPLDDITKSMAVQRHREMAKSPSGANHVLKAFRTVWNHARRTYDLPESPTSAIEWYEERPDGRIIDDLLAWKRRVGGLGNPIHAVFFELLLYTGFRKTEAMTIEWKNVHEDHIHLPVTKNGRSFDLPIVQRHHEILAPLQGLSRTWVFPSPKSPSGHLNAPTRLEWSPHAHRRTFATIAMETGVLEEVVGRLLNHTPLNLTGQRYVRPSLEALRPAMQQTCDELDRRL 1083
K KMPKL ETYA+KLPQ+ QGT+KHWDNEVKGLVLFVGK++KTWY+QKD+GGQT+R+LIGR+P I+A AARQTAL FALE RGAGK IQIGAPTL A EVYL RPKLRSE K +RQQF+LHL+DWL+LPLD+I+K+MA RHR MA +PSGANHVL++FRTVWNHARR++DLPESPT AIEWYEE+P+G+II+DL AW++RV L NPIH VF+EL+L+TGFRK+EA +EW+NVHED IHLP+TKNGRSFDLPI Q HHEILAPL+GLSR WVFPSPKS +GHL P R+ WSPHAHRRTFAT+AME GVLEE+VGRLLNHTPL++TGQRY RPSL+ALRP+M+ C EL R+
Sbjct: 7 KPTKMPKLPETYARKLPQSKQGTEKHWDNEVKGLVLFVGKRSKTWYYQKDIGGQTKRVLIGRFPVISADAARQTALGFALEWGRGAGKKIQIGAPTLERAMEVYLMRPKLRSEAQKRNLRQQFDLHLRDWLKLPLDEISKAMAADRHRSMASTPSGANHVLRSFRTVWNHARRSHDLPESPTMAIEWYEEKPNGKIIEDLEAWRKRVDDLYNPIHKVFYELILFTGFRKSEAFNLEWRNVHEDRIHLPMTKNGRSFDLPITQHHHEILAPLRGLSRQWVFPSPKSSAGHLTMPERMAWSPHAHRRTFATVAMEAGVLEEIVGRLLNHTPLSITGQRYTRPSLDALRPSMETVCTELRARM 366
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Match: integrase (family protein n=1 Tax=Marimonas lutisalis TaxID=2545756 RepID=UPI0010F64A89) HSP 1 Score: 580 bits (1494), Expect = 1.820e-206 Identity = 268/356 (75.28%), Postives = 312/356 (87.64%), Query Frame = 1
Query: 16 MPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTRRILIGRYPTITASAARQTALSFALEMSRGAGKHIQIGAPTLLEATEVYLARPKLRSETHKAGVRQQFELHLKDWLRLPLDDITKSMAVQRHREMAKSPSGANHVLKAFRTVWNHARRTYDLPESPTSAIEWYEERPDGRIIDDLLAWKRRVGGLGNPIHAVFFELLLYTGFRKTEAMTIEWKNVHEDHIHLPVTKNGRSFDLPIVQRHHEILAPLQGLSRTWVFPSPKSPSGHLNAPTRLEWSPHAHRRTFATIAMETGVLEEVVGRLLNHTPLNLTGQRYVRPSLEALRPAMQQTCDELDRRL 1083
MPKLTETYA+K+PQ T+K+WD+E+KGL LFVGKKAKTWYFQKDVGGQTRR++IGR+P I+A+AARQTAL FALE RGAGKHIQIGAPTL +A + YLARPKLRS+ H+ +RQQF+LHLKDWLRLPLD+ITK+M V+RHR MAK PS ANH LK FRTVWNHARRTYDLPESPT AIEW+EE+P+G+II+DL AW+ V GL NPIH VF+EL+L+TGFRKTEA+T+EWKNVHEDHI LP+TKNGRSFDLPI+Q HHEILAP++GL R WVFPSPK G L++P R+ WSPHAHRRTFAT+AME GVLEEVVGRLLNHTPL++TGQRYVRPSL+ LRPAMQ C+EL R+
Sbjct: 1 MPKLTETYARKVPQTKSVTEKYWDSEIKGLALFVGKKAKTWYFQKDVGGQTRRVMIGRFPVISAAAARQTALGFALEWGRGAGKHIQIGAPTLGDALDAYLARPKLRSDAHRLSLRQQFDLHLKDWLRLPLDEITKTMVVERHRSMAKHPSAANHTLKYFRTVWNHARRTYDLPESPTMAIEWFEEKPNGQIIEDLKAWRHTVDGLYNPIHKVFYELILFTGFRKTEALTLEWKNVHEDHISLPMTKNGRSFDLPILQLHHEILAPVRGLHRKWVFPSPKGLDGRLSSPQRITWSPHAHRRTFATVAMEAGVLEEVVGRLLNHTPLSITGQRYVRPSLDGLRPAMQTVCEELSGRI 356
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Match: integrase (family protein n=1 Tax=Ruegeria sediminis TaxID=2583820 RepID=UPI00110D875B) HSP 1 Score: 577 bits (1487), Expect = 1.360e-205 Identity = 265/356 (74.44%), Postives = 312/356 (87.64%), Query Frame = 1
Query: 16 MPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTRRILIGRYPTITASAARQTALSFALEMSRGAGKHIQIGAPTLLEATEVYLARPKLRSETHKAGVRQQFELHLKDWLRLPLDDITKSMAVQRHREMAKSPSGANHVLKAFRTVWNHARRTYDLPESPTSAIEWYEERPDGRIIDDLLAWKRRVGGLGNPIHAVFFELLLYTGFRKTEAMTIEWKNVHEDHIHLPVTKNGRSFDLPIVQRHHEILAPLQGLSRTWVFPSPKSPSGHLNAPTRLEWSPHAHRRTFATIAMETGVLEEVVGRLLNHTPLNLTGQRYVRPSLEALRPAMQQTCDELDRRL 1083
MP+LTET+A+K+PQ GT KHWDNEV+GLVLFVGK++KTWYFQKDVGGQTRRILIGR+PTI+A ARQTA+ FALE RGAGK++QIGAPTL EA EVYLARPKLRS+THK +RQQFELHLKDWLRLPLD+ITKSM V+RHR +A +PS ANH+LK FRTVWNHARR ++LPESPT AIEW+EE+P G II+DL W+R V L NPIH VF+EL+L+TGFRKTEA+T+EWKNV EDHIHLPVTKNGRSFD PI Q HHEILAP++GLSR WVFP+PKS +GH+ P ++ WSPHAHRRTFAT+AME G+LEEVVGRLLNHTPL++TGQRYV+PSL+ALRP+M+ TC E+ R+
Sbjct: 1 MPRLTETFARKVPQTKSGTSKHWDNEVRGLVLFVGKRSKTWYFQKDVGGQTRRILIGRFPTISADVARQTAMGFALEWGRGAGKNLQIGAPTLKEALEVYLARPKLRSDTHKLTMRQQFELHLKDWLRLPLDEITKSMVVERHRSLAATPSAANHLLKYFRTVWNHARRVHELPESPTMAIEWFEEQPKGTIIEDLKEWRREVDNLHNPIHKVFYELILFTGFRKTEALTLEWKNVREDHIHLPVTKNGRSFDFPITQIHHEILAPVRGLSRQWVFPTPKSLTGHITGPEKITWSPHAHRRTFATVAMEAGILEEVVGRLLNHTPLSITGQRYVKPSLDALRPSMETTCREIQDRI 356
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Match: Phage (integrase family protein n=1 Tax=Roseivivax lentus TaxID=633194 RepID=A0A1N7MMX9_9RHOB) HSP 1 Score: 576 bits (1485), Expect = 2.650e-205 Identity = 269/358 (75.14%), Postives = 304/358 (84.92%), Query Frame = 1
Query: 16 MPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTRRILIGRYPTITASAARQTALSFALEMSRGAGKHIQIGAPTLLEATEVYLARPKLRSETHKAGVRQQFELHLKDWLRLPLDDITKSMAVQRHREMAKSPSGANHVLKAFRTVWNHARRTYDLPESPTSAIEWYEERPDGRIIDDLLAWKRRVGGLGNPIHAVFFELLLYTGFRKTEAMTIEWKNVHEDHIHLPVTKNGRSFDLPIVQRHHEILAPLQGLSRTWVFPSPKSPSGHLNAPTRLEWSPHAHRRTFATIAMETGVLEEVVGRLLNHTPLNLTGQRYVRPSLEALRPAMQQTCDELDRRLGL 1089
MPKLTETYA KLP A GT KHWD+E+KGLVLFVGK++KTWYFQKDVGGQTRR+LIGR+P I+A ARQTA+ ALEMSRGAGK +QIGAPTL +A E YLARPKLRSE HK G+RQQF+LHLKDWLRLPLD+ITK+M RHR MA PS ANH LK FRTVWNHARR YDLPESPT AIEWY+E P G II DL AW+R V GL NPIH VF+ELLL+TGFRK EA+T+EW+NV EDH+HLP+TKNGRSFDLPI QRHHEILAP++GL R WVFPSPK P G L+ P R+ WSPHAHRRTFAT+AME GVLEE+VGRLLNHTPL++TGQRY +PSL+ALRPAM C ELD+RL +
Sbjct: 1 MPKLTETYAAKLPPAKSGTDKHWDSELKGLVLFVGKRSKTWYFQKDVGGQTRRVLIGRHPVISAQVARQTAMGLALEMSRGAGKSLQIGAPTLQDAMEAYLARPKLRSEAHKDGIRQQFDLHLKDWLRLPLDEITKAMVAHRHRSMAHIPSSANHTLKYFRTVWNHARRVYDLPESPTMAIEWYDETPAGTIIVDLRAWRREVDGLYNPIHKVFYELLLFTGFRKGEALTLEWRNVLEDHLHLPMTKNGRSFDLPITQRHHEILAPMRGLDRRWVFPSPKGPDGRLSTPQRMSWSPHAHRRTFATVAMEAGVLEEIVGRLLNHTPLSITGQRYAKPSLDALRPAMDIVCVELDKRLRI 358
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Match: integrase (family protein n=1 Tax=Ruegeria arenilitoris TaxID=1173585 RepID=UPI001480AE69) HSP 1 Score: 576 bits (1485), Expect = 2.850e-205 Identity = 269/355 (75.77%), Postives = 307/355 (86.48%), Query Frame = 1
Query: 16 MPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTRRILIGRYPTITASAARQTALSFALEMSRGAGKHIQIGAPTLLEATEVYLARPKLRSETHKAGVRQQFELHLKDWLRLPLDDITKSMAVQRHREMAKSPSGANHVLKAFRTVWNHARRTYDLPESPTSAIEWYEERPDGRIIDDLLAWKRRVGGLGNPIHAVFFELLLYTGFRKTEAMTIEWKNVHEDHIHLPVTKNGRSFDLPIVQRHHEILAPLQGLSRTWVFPSPKSPSGHLNAPTRLEWSPHAHRRTFATIAMETGVLEEVVGRLLNHTPLNLTGQRYVRPSLEALRPAMQQTCDELDRR 1080
MPKLTET+A+K+PQ +GT KHWD+EVKGLVLFVGK +KTWYFQKDVGGQTRR+LIGRYP I+A ARQTAL FAL+ RGAG+ +QIGAPTL A E YLARPKLRSE H++G+RQQFELHLKDWLRLPLD+ITKSM V+RHR MA +PS ANH LK FRTVWNHARR +DLPESPT AIEWYEE+P+G II+DL AW+ V L NPIH VF+ELLL+TGFRKTEA+T+EWKNV EDHIHLP+TKNGRSFDLPI Q HHEILAPL+GL WVFPSPKSPSGHL P R++WS H+HRRTFAT+AME G+LEE+VGRLLNHTPL++TGQRYV+PSL+ALRPAM C EL RR
Sbjct: 1 MPKLTETFARKVPQTKKGTAKHWDSEVKGLVLFVGKLSKTWYFQKDVGGQTRRVLIGRYPLISADVARQTALGFALDWGRGAGRQLQIGAPTLETAMETYLARPKLRSEAHRSGLRQQFELHLKDWLRLPLDEITKSMVVERHRSMAATPSSANHTLKYFRTVWNHARRVHDLPESPTMAIEWYEEQPNGSIIEDLNAWREAVDELSNPIHRVFYELLLFTGFRKTEALTLEWKNVQEDHIHLPMTKNGRSFDLPISQVHHEILAPLRGLHHQWVFPSPKSPSGHLKGPQRMQWSIHSHRRTFATVAMEAGILEEIVGRLLNHTPLSITGQRYVKPSLDALRPAMDTVCRELARR 355
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Match: Tyrosine-type (recombinase/integrase n=1 Tax=Ruegeria sp. PrR005 TaxID=2706882 RepID=A0A6B2NPM4_9RHOB) HSP 1 Score: 574 bits (1479), Expect = 1.810e-204 Identity = 269/355 (75.77%), Postives = 307/355 (86.48%), Query Frame = 1
Query: 16 MPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTRRILIGRYPTITASAARQTALSFALEMSRGAGKHIQIGAPTLLEATEVYLARPKLRSETHKAGVRQQFELHLKDWLRLPLDDITKSMAVQRHREMAKSPSGANHVLKAFRTVWNHARRTYDLPESPTSAIEWYEERPDGRIIDDLLAWKRRVGGLGNPIHAVFFELLLYTGFRKTEAMTIEWKNVHEDHIHLPVTKNGRSFDLPIVQRHHEILAPLQGLSRTWVFPSPKSPSGHLNAPTRLEWSPHAHRRTFATIAMETGVLEEVVGRLLNHTPLNLTGQRYVRPSLEALRPAMQQTCDELDRR 1080
MPKLTET+A+K+PQ GT KHWD+EV+GLVLFVGKKAKTWY+QKDVGGQTRR+LIGRYP ITA ARQTAL FALE RGAGK IQIGAPTL A E YLARPKLRS+THK +RQQFELHLKDWLRLPLD+ITKSM V+RHR +A +PS ANH+LK FRTVWNHARR +DLPESPT AIEWY+E+P G IIDDL+ W+ + GL NPIH VF+ELLL+TG RKTEA+T+EW++VHED IHLP+TKNGRSFDLPI+Q HHEILAP++GL R WVFPSPK G L+AP R++WSPHAHRRTFATIAME G+LEEVVGRLLNHTPL++TGQRYV+PSL+ALRPAMQ C EL R
Sbjct: 1 MPKLTETFARKVPQTKSGTDKHWDSEVRGLVLFVGKKAKTWYYQKDVGGQTRRVLIGRYPVITAEVARQTALGFALEWGRGAGKQIQIGAPTLQVAMEAYLARPKLRSDTHKLTMRQQFELHLKDWLRLPLDEITKSMVVERHRFLAATPSTANHLLKYFRTVWNHARRVHDLPESPTLAIEWYDEQPAGTIIDDLVEWRHEIEGLHNPIHTVFYELLLFTGLRKTEALTLEWRHVHEDRIHLPMTKNGRSFDLPILQLHHEILAPMKGLHRQWVFPSPKRTDGRLSAPQRMKWSPHAHRRTFATIAMEAGILEEVVGRLLNHTPLSITGQRYVKPSLDALRPAMQTVCKELSFR 355 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig11730.1440.1 >prot_Ecto-sp9_F_contig11730.1440.1 ID=prot_Ecto-sp9_F_contig11730.1440.1|Name=mRNA_Ecto-sp9_F_contig11730.1440.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=359bp MPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQback to top mRNA from alignment at Ecto-sp9_F_contig11730:1009..2100+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig11730.1440.1 ID=mRNA_Ecto-sp9_F_contig11730.1440.1|Name=mRNA_Ecto-sp9_F_contig11730.1440.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1092bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11730:1009..2100+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig11730:1009..2100+ >mRNA_Ecto-sp9_F_contig11730.1440.1 ID=mRNA_Ecto-sp9_F_contig11730.1440.1|Name=mRNA_Ecto-sp9_F_contig11730.1440.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2154bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11730:1009..2100+ (Ectocarpus species9 EcSCA_722f female)back to top |