mRNA_Ecto-sp9_F_contig11730.1440.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig11730.1440.1
Unique NamemRNA_Ecto-sp9_F_contig11730.1440.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Match: Integrase (n=2 Tax=Roseovarius TaxID=74030 RepID=A0A176EW67_9RHOB)

HSP 1 Score: 619 bits (1597), Expect = 1.930e-222
Identity = 286/357 (80.11%), Postives = 325/357 (91.04%), Query Frame = 1
Query:   16 MPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTRRILIGRYPTITASAARQTALSFALEMSRGAGKHIQIGAPTLLEATEVYLARPKLRSETHKAGVRQQFELHLKDWLRLPLDDITKSMAVQRHREMAKSPSGANHVLKAFRTVWNHARRTYDLPESPTSAIEWYEERPDGRIIDDLLAWKRRVGGLGNPIHAVFFELLLYTGFRKTEAMTIEWKNVHEDHIHLPVTKNGRSFDLPIVQRHHEILAPLQGLSRTWVFPSPKSPSGHLNAPTRLEWSPHAHRRTFATIAMETGVLEEVVGRLLNHTPLNLTGQRYVRPSLEALRPAMQQTCDELDRRLG 1086
            MPKLTETY KKLP    GT+K+WD+E+KGLV+FVGK++KTWYFQKDVGG+T+R+LIGRYPTITA  ARQTAL FALEMSRGAGKHIQIGAPTL +A EVYLARPKLRS+ HK  VR QFE HLKDW+ LPLD+ITKSMAV+RHR++AKSPS ANH L+ FR+VWNHARR +DLPESPT+AIEWYEERP+GR+I+DL+ WK+R+ GL NPIH VFF+L+LYTG RKTEA+T+EWKNVH+D IHLPVTKNGRSFDLPIVQRHHEILAP++GLSR WVFPSPKSPSGH+  P R+EWSPHAHRRTFAT+AME G+LEEVVGRLLNHTPLNLTGQRYVRPSL+ALRPAMQ TCDELDRRLG
Sbjct:    1 MPKLTETYVKKLPTVVNGTKKYWDSEIKGLVVFVGKRSKTWYFQKDVGGKTQRVLIGRYPTITAQTARQTALGFALEMSRGAGKHIQIGAPTLSDAMEVYLARPKLRSDVHKESVRTQFENHLKDWMGLPLDEITKSMAVERHRQLAKSPSTANHTLRYFRSVWNHARRVHDLPESPTNAIEWYEERPNGRVIEDLVEWKKRIDGLYNPIHGVFFKLMLYTGLRKTEALTLEWKNVHDDRIHLPVTKNGRSFDLPIVQRHHEILAPVEGLSRKWVFPSPKSPSGHVQGPQRIEWSPHAHRRTFATVAMEAGILEEVVGRLLNHTPLNLTGQRYVRPSLDALRPAMQTTCDELDRRLG 357          
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Match: integrase (family protein n=1 Tax=Roseovarius aestuariivivens TaxID=1888910 RepID=UPI0010813CEF)

HSP 1 Score: 588 bits (1516), Expect = 5.050e-210
Identity = 274/357 (76.75%), Postives = 310/357 (86.83%), Query Frame = 1
Query:   16 MPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTRRILIGRYPTITASAARQTALSFALEMSRGAGKHIQIGAPTLLEATEVYLARPKLRSETHKAGVRQQFELHLKDWLRLPLDDITKSMAVQRHREMAKSPSGANHVLKAFRTVWNHARRTYDLPESPTSAIEWYEERPDGRIIDDLLAWKRRVGGLGNPIHAVFFELLLYTGFRKTEAMTIEWKNVHEDHIHLPVTKNGRSFDLPIVQRHHEILAPLQGLSRTWVFPSPKSPSGHLNAPTRLEWSPHAHRRTFATIAMETGVLEEVVGRLLNHTPLNLTGQRYVRPSLEALRPAMQQTCDELDRRLG 1086
            MPKLTET+A+K+P   QGT KHWDNEVKGLVLFVGKK+KTWYFQKDVGGQTRRILIGRYP I+A AARQTAL +ALE  RGAGK +QIGAPTL  A E YLARPKLRS+THK  VRQQFELHLKDWLRLPLD+ITK+M  +RHR MA +PS ANH LK FR+VWNHARR YDLPESPT AIEW+EERP+G II D  AW+R +  L NPIHAVF+ELLL+TG RKTEA+T++WK+VHEDH+HLP+TKNGRSFDLPI+Q HHEILAP+QGL RTWVFPSPKSPSGH+  P R++WSPHAHRRTFAT+AME GVLEEVVGRLLNHTP ++TGQRY +PSL+ALRPAM+ TC  L  RLG
Sbjct:    1 MPKLTETFARKVPPTKQGTAKHWDNEVKGLVLFVGKKSKTWYFQKDVGGQTRRILIGRYPVISADAARQTALGYALEWGRGAGKKVQIGAPTLRVAMEAYLARPKLRSDTHKISVRQQFELHLKDWLRLPLDEITKAMVAERHRSMAATPSAANHTLKYFRSVWNHARRIYDLPESPTMAIEWFEERPNGSIISDFRAWRRTIDELYNPIHAVFYELLLFTGLRKTEALTLQWKHVHEDHLHLPMTKNGRSFDLPILQLHHEILAPVQGLHRTWVFPSPKSPSGHVEGPQRIKWSPHAHRRTFATVAMEAGVLEEVVGRLLNHTPQSITGQRYTKPSLDALRPAMETTCKALQARLG 357          
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Match: Integrase (n=1 Tax=Maritimibacter sp. 55A14 TaxID=2174844 RepID=A0A2U2CH41_9RHOB)

HSP 1 Score: 585 bits (1508), Expect = 6.690e-209
Identity = 272/357 (76.19%), Postives = 307/357 (85.99%), Query Frame = 1
Query:   16 MPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTRRILIGRYPTITASAARQTALSFALEMSRGAGKHIQIGAPTLLEATEVYLARPKLRSETHKAGVRQQFELHLKDWLRLPLDDITKSMAVQRHREMAKSPSGANHVLKAFRTVWNHARRTYDLPESPTSAIEWYEERPDGRIIDDLLAWKRRVGGLGNPIHAVFFELLLYTGFRKTEAMTIEWKNVHEDHIHLPVTKNGRSFDLPIVQRHHEILAPLQGLSRTWVFPSPKSPSGHLNAPTRLEWSPHAHRRTFATIAMETGVLEEVVGRLLNHTPLNLTGQRYVRPSLEALRPAMQQTCDELDRRLG 1086
            MPKLTETY +KLP A  G QKHWD+E+KGL LFVGK++KTWYFQKDVGG+T+RI+IGRYP ITA  ARQTA+ +ALEMSRGAGK IQIGAPTL  A E YLARPKLRSETH+ G+RQQF+ HLKDWLRLPLD+ITKSM   RHR MAK+PSGANHVLK FRTVWNHARRTYDLPESPT AIEWYEE+P G II+DL  W+R V  L NPIH VF+EL+L+TG RKTEA+T+EWKNVH+ H+H P+TKNGRSFDLPI+Q HHEILAPL+GL R WVFPSPKS  G L +P RLEWSPHAHRRTFAT+AME GVLEEVVGRLLNHTPL++TGQRY RPSL+ALRPAM+  C EL RR+ 
Sbjct:    1 MPKLTETYVRKLPAAKSGAQKHWDSEIKGLALFVGKRSKTWYFQKDVGGRTQRIMIGRYPIITAETARQTAMGYALEMSRGAGKQIQIGAPTLEAAMESYLARPKLRSETHRVGMRQQFDKHLKDWLRLPLDEITKSMVADRHRSMAKTPSGANHVLKYFRTVWNHARRTYDLPESPTMAIEWYEEKPSGAIIEDLPRWRRAVDDLYNPIHQVFYELILFTGLRKTEALTLEWKNVHDGHLHFPITKNGRSFDLPILQIHHEILAPLRGLDRKWVFPSPKSSKGRLTSPERLEWSPHAHRRTFATVAMEAGVLEEVVGRLLNHTPLSITGQRYTRPSLDALRPAMEMACGELSRRIA 357          
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Match: integrase (family protein n=1 Tax=Marimonas lutisalis TaxID=2545756 RepID=UPI0010F71EE2)

HSP 1 Score: 582 bits (1499), Expect = 1.630e-207
Identity = 267/355 (75.21%), Postives = 313/355 (88.17%), Query Frame = 1
Query:   16 MPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTRRILIGRYPTITASAARQTALSFALEMSRGAGKHIQIGAPTLLEATEVYLARPKLRSETHKAGVRQQFELHLKDWLRLPLDDITKSMAVQRHREMAKSPSGANHVLKAFRTVWNHARRTYDLPESPTSAIEWYEERPDGRIIDDLLAWKRRVGGLGNPIHAVFFELLLYTGFRKTEAMTIEWKNVHEDHIHLPVTKNGRSFDLPIVQRHHEILAPLQGLSRTWVFPSPKSPSGHLNAPTRLEWSPHAHRRTFATIAMETGVLEEVVGRLLNHTPLNLTGQRYVRPSLEALRPAMQQTCDELDRR 1080
            MPKLTETYA+K+PQ   GT KHWDNEVKGLVLFVGKKAKTWYFQKDVGGQT+R+LIGR+P I+A+AAR+TAL FALE  RGAGKHIQIGAPTL  A E YLARPKLRS+ H+  VRQQF LHLKDW+ LPLD+ITK+M V+RHR MAK PS ANH LK FRTVWNHARR +DLPESPT AIEWYEE+P G+II+DL+ W++ V GL NPIH VF+EL+L+TG RKTEA+T+EWKNV EDHIHLP+TKNGRSFDLPI+Q HHEILAP++GLSR WVFPSPKS +G++  P +++WSPHAHRRTFAT+AME+G+LEE+VGRLLNHTPL++TGQRYV+PSL+ALRP+M+  CDEL RR
Sbjct:    1 MPKLTETYARKVPQTKNGTDKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTKRVLIGRFPVISAAAARETALGFALEWGRGAGKHIQIGAPTLEAAMEGYLARPKLRSDAHRLSVRQQFGLHLKDWMGLPLDEITKAMVVERHRSMAKYPSAANHTLKYFRTVWNHARRIHDLPESPTMAIEWYEEQPSGQIIEDLVEWRKAVDGLYNPIHKVFYELILFTGLRKTEALTLEWKNVREDHIHLPMTKNGRSFDLPILQHHHEILAPMRGLSRQWVFPSPKSKTGYVTGPEKIQWSPHAHRRTFATVAMESGILEEIVGRLLNHTPLSITGQRYVKPSLDALRPSMETVCDELRRR 355          
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Match: Phage (integrase family protein n=2 Tax=Vannielia litorea TaxID=1217970 RepID=A0A1N6GII8_9RHOB)

HSP 1 Score: 580 bits (1494), Expect = 1.260e-206
Identity = 267/360 (74.17%), Postives = 314/360 (87.22%), Query Frame = 1
Query:    4 KADKMPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTRRILIGRYPTITASAARQTALSFALEMSRGAGKHIQIGAPTLLEATEVYLARPKLRSETHKAGVRQQFELHLKDWLRLPLDDITKSMAVQRHREMAKSPSGANHVLKAFRTVWNHARRTYDLPESPTSAIEWYEERPDGRIIDDLLAWKRRVGGLGNPIHAVFFELLLYTGFRKTEAMTIEWKNVHEDHIHLPVTKNGRSFDLPIVQRHHEILAPLQGLSRTWVFPSPKSPSGHLNAPTRLEWSPHAHRRTFATIAMETGVLEEVVGRLLNHTPLNLTGQRYVRPSLEALRPAMQQTCDELDRRL 1083
            K  KMPKL ETYA+KLPQ+ QGT+KHWDNEVKGLVLFVGK++KTWY+QKD+GGQT+R+LIGR+P I+A AARQTAL FALE  RGAGK IQIGAPTL  A EVYL RPKLRSE  K  +RQQF+LHL+DWL+LPLD+I+K+MA  RHR MA +PSGANHVL++FRTVWNHARR++DLPESPT AIEWYEE+P+G+II+DL AW++RV  L NPIH VF+EL+L+TGFRK+EA  +EW+NVHED IHLP+TKNGRSFDLPI Q HHEILAPL+GLSR WVFPSPKS +GHL  P R+ WSPHAHRRTFAT+AME GVLEE+VGRLLNHTPL++TGQRY RPSL+ALRP+M+  C EL  R+
Sbjct:    7 KPTKMPKLPETYARKLPQSKQGTEKHWDNEVKGLVLFVGKRSKTWYYQKDIGGQTKRVLIGRFPVISADAARQTALGFALEWGRGAGKKIQIGAPTLERAMEVYLMRPKLRSEAQKRNLRQQFDLHLRDWLKLPLDEISKAMAADRHRSMASTPSGANHVLRSFRTVWNHARRSHDLPESPTMAIEWYEEKPNGKIIEDLEAWRKRVDDLYNPIHKVFYELILFTGFRKSEAFNLEWRNVHEDRIHLPMTKNGRSFDLPITQHHHEILAPLRGLSRQWVFPSPKSSAGHLTMPERMAWSPHAHRRTFATVAMEAGVLEEIVGRLLNHTPLSITGQRYTRPSLDALRPSMETVCTELRARM 366          
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Match: integrase (family protein n=1 Tax=Marimonas lutisalis TaxID=2545756 RepID=UPI0010F64A89)

HSP 1 Score: 580 bits (1494), Expect = 1.820e-206
Identity = 268/356 (75.28%), Postives = 312/356 (87.64%), Query Frame = 1
Query:   16 MPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTRRILIGRYPTITASAARQTALSFALEMSRGAGKHIQIGAPTLLEATEVYLARPKLRSETHKAGVRQQFELHLKDWLRLPLDDITKSMAVQRHREMAKSPSGANHVLKAFRTVWNHARRTYDLPESPTSAIEWYEERPDGRIIDDLLAWKRRVGGLGNPIHAVFFELLLYTGFRKTEAMTIEWKNVHEDHIHLPVTKNGRSFDLPIVQRHHEILAPLQGLSRTWVFPSPKSPSGHLNAPTRLEWSPHAHRRTFATIAMETGVLEEVVGRLLNHTPLNLTGQRYVRPSLEALRPAMQQTCDELDRRL 1083
            MPKLTETYA+K+PQ    T+K+WD+E+KGL LFVGKKAKTWYFQKDVGGQTRR++IGR+P I+A+AARQTAL FALE  RGAGKHIQIGAPTL +A + YLARPKLRS+ H+  +RQQF+LHLKDWLRLPLD+ITK+M V+RHR MAK PS ANH LK FRTVWNHARRTYDLPESPT AIEW+EE+P+G+II+DL AW+  V GL NPIH VF+EL+L+TGFRKTEA+T+EWKNVHEDHI LP+TKNGRSFDLPI+Q HHEILAP++GL R WVFPSPK   G L++P R+ WSPHAHRRTFAT+AME GVLEEVVGRLLNHTPL++TGQRYVRPSL+ LRPAMQ  C+EL  R+
Sbjct:    1 MPKLTETYARKVPQTKSVTEKYWDSEIKGLALFVGKKAKTWYFQKDVGGQTRRVMIGRFPVISAAAARQTALGFALEWGRGAGKHIQIGAPTLGDALDAYLARPKLRSDAHRLSLRQQFDLHLKDWLRLPLDEITKTMVVERHRSMAKHPSAANHTLKYFRTVWNHARRTYDLPESPTMAIEWFEEKPNGQIIEDLKAWRHTVDGLYNPIHKVFYELILFTGFRKTEALTLEWKNVHEDHISLPMTKNGRSFDLPILQLHHEILAPVRGLHRKWVFPSPKGLDGRLSSPQRITWSPHAHRRTFATVAMEAGVLEEVVGRLLNHTPLSITGQRYVRPSLDGLRPAMQTVCEELSGRI 356          
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Match: integrase (family protein n=1 Tax=Ruegeria sediminis TaxID=2583820 RepID=UPI00110D875B)

HSP 1 Score: 577 bits (1487), Expect = 1.360e-205
Identity = 265/356 (74.44%), Postives = 312/356 (87.64%), Query Frame = 1
Query:   16 MPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTRRILIGRYPTITASAARQTALSFALEMSRGAGKHIQIGAPTLLEATEVYLARPKLRSETHKAGVRQQFELHLKDWLRLPLDDITKSMAVQRHREMAKSPSGANHVLKAFRTVWNHARRTYDLPESPTSAIEWYEERPDGRIIDDLLAWKRRVGGLGNPIHAVFFELLLYTGFRKTEAMTIEWKNVHEDHIHLPVTKNGRSFDLPIVQRHHEILAPLQGLSRTWVFPSPKSPSGHLNAPTRLEWSPHAHRRTFATIAMETGVLEEVVGRLLNHTPLNLTGQRYVRPSLEALRPAMQQTCDELDRRL 1083
            MP+LTET+A+K+PQ   GT KHWDNEV+GLVLFVGK++KTWYFQKDVGGQTRRILIGR+PTI+A  ARQTA+ FALE  RGAGK++QIGAPTL EA EVYLARPKLRS+THK  +RQQFELHLKDWLRLPLD+ITKSM V+RHR +A +PS ANH+LK FRTVWNHARR ++LPESPT AIEW+EE+P G II+DL  W+R V  L NPIH VF+EL+L+TGFRKTEA+T+EWKNV EDHIHLPVTKNGRSFD PI Q HHEILAP++GLSR WVFP+PKS +GH+  P ++ WSPHAHRRTFAT+AME G+LEEVVGRLLNHTPL++TGQRYV+PSL+ALRP+M+ TC E+  R+
Sbjct:    1 MPRLTETFARKVPQTKSGTSKHWDNEVRGLVLFVGKRSKTWYFQKDVGGQTRRILIGRFPTISADVARQTAMGFALEWGRGAGKNLQIGAPTLKEALEVYLARPKLRSDTHKLTMRQQFELHLKDWLRLPLDEITKSMVVERHRSLAATPSAANHLLKYFRTVWNHARRVHELPESPTMAIEWFEEQPKGTIIEDLKEWRREVDNLHNPIHKVFYELILFTGFRKTEALTLEWKNVREDHIHLPVTKNGRSFDFPITQIHHEILAPVRGLSRQWVFPTPKSLTGHITGPEKITWSPHAHRRTFATVAMEAGILEEVVGRLLNHTPLSITGQRYVKPSLDALRPSMETTCREIQDRI 356          
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Match: Phage (integrase family protein n=1 Tax=Roseivivax lentus TaxID=633194 RepID=A0A1N7MMX9_9RHOB)

HSP 1 Score: 576 bits (1485), Expect = 2.650e-205
Identity = 269/358 (75.14%), Postives = 304/358 (84.92%), Query Frame = 1
Query:   16 MPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTRRILIGRYPTITASAARQTALSFALEMSRGAGKHIQIGAPTLLEATEVYLARPKLRSETHKAGVRQQFELHLKDWLRLPLDDITKSMAVQRHREMAKSPSGANHVLKAFRTVWNHARRTYDLPESPTSAIEWYEERPDGRIIDDLLAWKRRVGGLGNPIHAVFFELLLYTGFRKTEAMTIEWKNVHEDHIHLPVTKNGRSFDLPIVQRHHEILAPLQGLSRTWVFPSPKSPSGHLNAPTRLEWSPHAHRRTFATIAMETGVLEEVVGRLLNHTPLNLTGQRYVRPSLEALRPAMQQTCDELDRRLGL 1089
            MPKLTETYA KLP A  GT KHWD+E+KGLVLFVGK++KTWYFQKDVGGQTRR+LIGR+P I+A  ARQTA+  ALEMSRGAGK +QIGAPTL +A E YLARPKLRSE HK G+RQQF+LHLKDWLRLPLD+ITK+M   RHR MA  PS ANH LK FRTVWNHARR YDLPESPT AIEWY+E P G II DL AW+R V GL NPIH VF+ELLL+TGFRK EA+T+EW+NV EDH+HLP+TKNGRSFDLPI QRHHEILAP++GL R WVFPSPK P G L+ P R+ WSPHAHRRTFAT+AME GVLEE+VGRLLNHTPL++TGQRY +PSL+ALRPAM   C ELD+RL +
Sbjct:    1 MPKLTETYAAKLPPAKSGTDKHWDSELKGLVLFVGKRSKTWYFQKDVGGQTRRVLIGRHPVISAQVARQTAMGLALEMSRGAGKSLQIGAPTLQDAMEAYLARPKLRSEAHKDGIRQQFDLHLKDWLRLPLDEITKAMVAHRHRSMAHIPSSANHTLKYFRTVWNHARRVYDLPESPTMAIEWYDETPAGTIIVDLRAWRREVDGLYNPIHKVFYELLLFTGFRKGEALTLEWRNVLEDHLHLPMTKNGRSFDLPITQRHHEILAPMRGLDRRWVFPSPKGPDGRLSTPQRMSWSPHAHRRTFATVAMEAGVLEEIVGRLLNHTPLSITGQRYAKPSLDALRPAMDIVCVELDKRLRI 358          
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Match: integrase (family protein n=1 Tax=Ruegeria arenilitoris TaxID=1173585 RepID=UPI001480AE69)

HSP 1 Score: 576 bits (1485), Expect = 2.850e-205
Identity = 269/355 (75.77%), Postives = 307/355 (86.48%), Query Frame = 1
Query:   16 MPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTRRILIGRYPTITASAARQTALSFALEMSRGAGKHIQIGAPTLLEATEVYLARPKLRSETHKAGVRQQFELHLKDWLRLPLDDITKSMAVQRHREMAKSPSGANHVLKAFRTVWNHARRTYDLPESPTSAIEWYEERPDGRIIDDLLAWKRRVGGLGNPIHAVFFELLLYTGFRKTEAMTIEWKNVHEDHIHLPVTKNGRSFDLPIVQRHHEILAPLQGLSRTWVFPSPKSPSGHLNAPTRLEWSPHAHRRTFATIAMETGVLEEVVGRLLNHTPLNLTGQRYVRPSLEALRPAMQQTCDELDRR 1080
            MPKLTET+A+K+PQ  +GT KHWD+EVKGLVLFVGK +KTWYFQKDVGGQTRR+LIGRYP I+A  ARQTAL FAL+  RGAG+ +QIGAPTL  A E YLARPKLRSE H++G+RQQFELHLKDWLRLPLD+ITKSM V+RHR MA +PS ANH LK FRTVWNHARR +DLPESPT AIEWYEE+P+G II+DL AW+  V  L NPIH VF+ELLL+TGFRKTEA+T+EWKNV EDHIHLP+TKNGRSFDLPI Q HHEILAPL+GL   WVFPSPKSPSGHL  P R++WS H+HRRTFAT+AME G+LEE+VGRLLNHTPL++TGQRYV+PSL+ALRPAM   C EL RR
Sbjct:    1 MPKLTETFARKVPQTKKGTAKHWDSEVKGLVLFVGKLSKTWYFQKDVGGQTRRVLIGRYPLISADVARQTALGFALDWGRGAGRQLQIGAPTLETAMETYLARPKLRSEAHRSGLRQQFELHLKDWLRLPLDEITKSMVVERHRSMAATPSSANHTLKYFRTVWNHARRVHDLPESPTMAIEWYEEQPNGSIIEDLNAWREAVDELSNPIHRVFYELLLFTGFRKTEALTLEWKNVQEDHIHLPMTKNGRSFDLPISQVHHEILAPLRGLHHQWVFPSPKSPSGHLKGPQRMQWSIHSHRRTFATVAMEAGILEEIVGRLLNHTPLSITGQRYVKPSLDALRPAMDTVCRELARR 355          
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Match: Tyrosine-type (recombinase/integrase n=1 Tax=Ruegeria sp. PrR005 TaxID=2706882 RepID=A0A6B2NPM4_9RHOB)

HSP 1 Score: 574 bits (1479), Expect = 1.810e-204
Identity = 269/355 (75.77%), Postives = 307/355 (86.48%), Query Frame = 1
Query:   16 MPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQTRRILIGRYPTITASAARQTALSFALEMSRGAGKHIQIGAPTLLEATEVYLARPKLRSETHKAGVRQQFELHLKDWLRLPLDDITKSMAVQRHREMAKSPSGANHVLKAFRTVWNHARRTYDLPESPTSAIEWYEERPDGRIIDDLLAWKRRVGGLGNPIHAVFFELLLYTGFRKTEAMTIEWKNVHEDHIHLPVTKNGRSFDLPIVQRHHEILAPLQGLSRTWVFPSPKSPSGHLNAPTRLEWSPHAHRRTFATIAMETGVLEEVVGRLLNHTPLNLTGQRYVRPSLEALRPAMQQTCDELDRR 1080
            MPKLTET+A+K+PQ   GT KHWD+EV+GLVLFVGKKAKTWY+QKDVGGQTRR+LIGRYP ITA  ARQTAL FALE  RGAGK IQIGAPTL  A E YLARPKLRS+THK  +RQQFELHLKDWLRLPLD+ITKSM V+RHR +A +PS ANH+LK FRTVWNHARR +DLPESPT AIEWY+E+P G IIDDL+ W+  + GL NPIH VF+ELLL+TG RKTEA+T+EW++VHED IHLP+TKNGRSFDLPI+Q HHEILAP++GL R WVFPSPK   G L+AP R++WSPHAHRRTFATIAME G+LEEVVGRLLNHTPL++TGQRYV+PSL+ALRPAMQ  C EL  R
Sbjct:    1 MPKLTETFARKVPQTKSGTDKHWDSEVRGLVLFVGKKAKTWYYQKDVGGQTRRVLIGRYPVITAEVARQTALGFALEWGRGAGKQIQIGAPTLQVAMEAYLARPKLRSDTHKLTMRQQFELHLKDWLRLPLDEITKSMVVERHRFLAATPSTANHLLKYFRTVWNHARRVHDLPESPTLAIEWYDEQPAGTIIDDLVEWRHEIEGLHNPIHTVFYELLLFTGLRKTEALTLEWRHVHEDRIHLPMTKNGRSFDLPILQLHHEILAPMKGLHRQWVFPSPKRTDGRLSAPQRMKWSPHAHRRTFATIAMEAGILEEVVGRLLNHTPLSITGQRYVKPSLDALRPAMQTVCKELSFR 355          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11730.1440.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Integrase1.930e-22280.11n=2 Tax=Roseovarius TaxID=74030 RepID=A0A176EW67_9... [more]
integrase5.050e-21076.75family protein n=1 Tax=Roseovarius aestuariivivens... [more]
Integrase6.690e-20976.19n=1 Tax=Maritimibacter sp. 55A14 TaxID=2174844 Rep... [more]
integrase1.630e-20775.21family protein n=1 Tax=Marimonas lutisalis TaxID=2... [more]
Phage1.260e-20674.17integrase family protein n=2 Tax=Vannielia litorea... [more]
integrase1.820e-20675.28family protein n=1 Tax=Marimonas lutisalis TaxID=2... [more]
integrase1.360e-20574.44family protein n=1 Tax=Ruegeria sediminis TaxID=25... [more]
Phage2.650e-20575.14integrase family protein n=1 Tax=Roseivivax lentus... [more]
integrase2.850e-20575.77family protein n=1 Tax=Ruegeria arenilitoris TaxID... [more]
Tyrosine-type1.810e-20475.77recombinase/integrase n=1 Tax=Ruegeria sp. PrR005 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11730contigEcto-sp9_F_contig11730:1009..2100 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score556.6
Seed ortholog evalue8.5e-156
Seed eggNOG ortholog1342299.Z947_3443
EggNOG free text desc.Phage integrase family
EggNOG OGs1R7FT@1224,2U4R9@28211,3ZZ8C@60136,COG0582@1,COG0582@2
COG Functional cat.L
Best tax levelSulfitobacter
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size1092
Cds size1077
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928432.1359313-UTR-Ecto-sp9_F_contig11730:1008..10231622928432.1359313-UTR-Ecto-sp9_F_contig11730:1008..1023Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig11730 1009..1023 +
1692277869.0610323-UTR-Ecto-sp9_F_contig11730:1008..10231692277869.0610323-UTR-Ecto-sp9_F_contig11730:1008..1023Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig11730 1009..1023 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928432.1507144-CDS-Ecto-sp9_F_contig11730:1023..21001622928432.1507144-CDS-Ecto-sp9_F_contig11730:1023..2100Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11730 1024..2100 +
1692277869.0700526-CDS-Ecto-sp9_F_contig11730:1023..21001692277869.0700526-CDS-Ecto-sp9_F_contig11730:1023..2100Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig11730 1024..2100 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11730.1440.1prot_Ecto-sp9_F_contig11730.1440.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig11730 1024..2100 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig11730.1440.1

>prot_Ecto-sp9_F_contig11730.1440.1 ID=prot_Ecto-sp9_F_contig11730.1440.1|Name=mRNA_Ecto-sp9_F_contig11730.1440.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=359bp
MPKLTETYAKKLPQAAQGTQKHWDNEVKGLVLFVGKKAKTWYFQKDVGGQ
TRRILIGRYPTITASAARQTALSFALEMSRGAGKHIQIGAPTLLEATEVY
LARPKLRSETHKAGVRQQFELHLKDWLRLPLDDITKSMAVQRHREMAKSP
SGANHVLKAFRTVWNHARRTYDLPESPTSAIEWYEERPDGRIIDDLLAWK
RRVGGLGNPIHAVFFELLLYTGFRKTEAMTIEWKNVHEDHIHLPVTKNGR
SFDLPIVQRHHEILAPLQGLSRTWVFPSPKSPSGHLNAPTRLEWSPHAHR
RTFATIAMETGVLEEVVGRLLNHTPLNLTGQRYVRPSLEALRPAMQQTCD
ELDRRLGL*
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mRNA from alignment at Ecto-sp9_F_contig11730:1009..2100+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig11730.1440.1 ID=mRNA_Ecto-sp9_F_contig11730.1440.1|Name=mRNA_Ecto-sp9_F_contig11730.1440.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1092bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11730:1009..2100+ (Ectocarpus species9 EcSCA_722f female)
CAAAAAGCCGACAAAATGCCAAAGCTCACTGAGACCTACGCAAAGAAGCT TCCACAGGCCGCTCAAGGCACACAGAAGCACTGGGACAACGAAGTCAAAG GCCTCGTTCTCTTCGTCGGCAAGAAGGCGAAGACTTGGTACTTCCAAAAG GACGTCGGTGGGCAAACCAGACGTATCCTGATTGGACGGTATCCGACGAT TACGGCCAGCGCCGCGCGCCAGACCGCGCTGAGTTTTGCGCTGGAGATGT CGCGCGGTGCGGGCAAACACATCCAGATCGGAGCGCCGACATTGCTCGAG GCAACGGAGGTCTATCTTGCCCGGCCCAAGTTGCGATCCGAAACGCACAA GGCGGGTGTGCGCCAGCAGTTTGAATTGCACCTCAAGGATTGGCTTCGAT TGCCGCTCGATGACATTACCAAGTCGATGGCGGTACAGCGGCACCGGGAG ATGGCGAAATCGCCATCCGGTGCCAATCATGTCCTGAAAGCGTTTCGCAC GGTTTGGAACCATGCACGCCGGACCTACGATTTGCCGGAGAGTCCAACGA GCGCAATCGAATGGTATGAGGAGCGGCCAGACGGCAGGATAATCGATGAT CTTCTGGCCTGGAAGCGAAGGGTAGGGGGACTCGGCAACCCCATTCACGC GGTATTTTTCGAGCTGCTTCTCTACACCGGGTTTCGAAAGACTGAAGCCA TGACGATCGAATGGAAGAACGTTCATGAGGATCACATCCATCTTCCGGTG ACCAAGAACGGGCGCAGCTTTGATCTCCCAATTGTCCAAAGGCACCATGA AATCCTCGCCCCTCTTCAGGGGTTGAGCAGGACATGGGTCTTTCCCTCTC CAAAGTCGCCTAGCGGCCATTTGAACGCGCCGACGCGTCTTGAGTGGTCG CCCCATGCGCATCGTCGAACTTTCGCCACGATCGCGATGGAAACTGGTGT TCTGGAAGAAGTGGTTGGCAGGCTTCTGAACCACACGCCTCTGAACCTGA CAGGCCAGAGGTATGTACGGCCGTCATTGGAGGCGTTGAGGCCCGCCATG CAACAGACATGTGACGAATTGGATCGAAGATTGGGGCTCTAG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig11730:1009..2100+

>mRNA_Ecto-sp9_F_contig11730.1440.1 ID=mRNA_Ecto-sp9_F_contig11730.1440.1|Name=mRNA_Ecto-sp9_F_contig11730.1440.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2154bp|location=Sequence derived from alignment at Ecto-sp9_F_contig11730:1009..2100+ (Ectocarpus species9 EcSCA_722f female)
ATGCCAAAGCTCACTGAGACCTACGCAAAGAAGCTTCCACAGGCCGCTCA
AGGCACACAGAAGCACTGGGACAACGAAGTCAAAGGCCTCGTTCTCTTCG
TCGGCAAGAAGGCGAAGACTTGGTACTTCCAAAAGGACGTCGGTGGGCAA
ACCAGACGTATCCTGATTGGACGGTATCCGACGATTACGGCCAGCGCCGC
GCGCCAGACCGCGCTGAGTTTTGCGCTGGAGATGTCGCGCGGTGCGGGCA
AACACATCCAGATCGGAGCGCCGACATTGCTCGAGGCAACGGAGGTCTAT
CTTGCCCGGCCCAAGTTGCGATCCGAAACGCACAAGGCGGGTGTGCGCCA
GCAGTTTGAATTGCACCTCAAGGATTGGCTTCGATTGCCGCTCGATGACA
TTACCAAGTCGATGGCGGTACAGCGGCACCGGGAGATGGCGAAATCGCCA
TCCGGTGCCAATCATGTCCTGAAAGCGTTTCGCACGGTTTGGAACCATGC
ACGCCGGACCTACGATTTGCCGGAGAGTCCAACGAGCGCAATCGAATGGT
ATGAGGAGCGGCCAGACGGCAGGATAATCGATGATCTTCTGGCCTGGAAG
CGAAGGGTAGGGGGACTCGGCAACCCCATTCACGCGGTATTTTTCGAGCT
GCTTCTCTACACCGGGTTTCGAAAGACTGAAGCCATGACGATCGAATGGA
AGAACGTTCATGAGGATCACATCCATCTTCCGGTGACCAAGAACGGGCGC
AGCTTTGATCTCCCAATTGTCCAAAGGCACCATGAAATCCTCGCCCCTCT
TCAGGGGTTGAGCAGGACATGGGTCTTTCCCTCTCCAAAGTCGCCTAGCG
GCCATTTGAACGCGCCGACGCGTCTTGAGTGGTCGCCCCATGCGCATCGT
CGAACTTTCGCCACGATCGCGATGGAAACTGGTGTTCTGGAAGAAGTGGT
TGGCAGGCTTCTGAACCACACGCCTCTGAACCTGACAGGCCAGAGGTATG
TACGGCCGTCATTGGAGGCGTTGAGGCCCGCCATGCAACAGACATGTGAC
GAATTGGATCGAAGATTGGGGCTCTAGATGCCAAAGCTCACTGAGACCTA
CGCAAAGAAGCTTCCACAGGCCGCTCAAGGCACACAGAAGCACTGGGACA
ACGAAGTCAAAGGCCTCGTTCTCTTCGTCGGCAAGAAGGCGAAGACTTGG
TACTTCCAAAAGGACGTCGGTGGGCAAACCAGACGTATCCTGATTGGACG
GTATCCGACGATTACGGCCAGCGCCGCGCGCCAGACCGCGCTGAGTTTTG
CGCTGGAGATGTCGCGCGGTGCGGGCAAACACATCCAGATCGGAGCGCCG
ACATTGCTCGAGGCAACGGAGGTCTATCTTGCCCGGCCCAAGTTGCGATC
CGAAACGCACAAGGCGGGTGTGCGCCAGCAGTTTGAATTGCACCTCAAGG
ATTGGCTTCGATTGCCGCTCGATGACATTACCAAGTCGATGGCGGTACAG
CGGCACCGGGAGATGGCGAAATCGCCATCCGGTGCCAATCATGTCCTGAA
AGCGTTTCGCACGGTTTGGAACCATGCACGCCGGACCTACGATTTGCCGG
AGAGTCCAACGAGCGCAATCGAATGGTATGAGGAGCGGCCAGACGGCAGG
ATAATCGATGATCTTCTGGCCTGGAAGCGAAGGGTAGGGGGACTCGGCAA
CCCCATTCACGCGGTATTTTTCGAGCTGCTTCTCTACACCGGGTTTCGAA
AGACTGAAGCCATGACGATCGAATGGAAGAACGTTCATGAGGATCACATC
CATCTTCCGGTGACCAAGAACGGGCGCAGCTTTGATCTCCCAATTGTCCA
AAGGCACCATGAAATCCTCGCCCCTCTTCAGGGGTTGAGCAGGACATGGG
TCTTTCCCTCTCCAAAGTCGCCTAGCGGCCATTTGAACGCGCCGACGCGT
CTTGAGTGGTCGCCCCATGCGCATCGTCGAACTTTCGCCACGATCGCGAT
GGAAACTGGTGTTCTGGAAGAAGTGGTTGGCAGGCTTCTGAACCACACGC
CTCTGAACCTGACAGGCCAGAGGTATGTACGGCCGTCATTGGAGGCGTTG
AGGCCCGCCATGCAACAGACATGTGACGAATTGGATCGAAGATTGGGGCT
CTAG
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