mRNA_Ecto-sp9_F_contig1069.612.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1069.612.1
Unique NamemRNA_Ecto-sp9_F_contig1069.612.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Match: Amidohydro-rel (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKX5_ECTSI)

HSP 1 Score: 507 bits (1306), Expect = 2.800e-177
Identity = 242/252 (96.03%), Postives = 245/252 (97.22%), Query Frame = 1
Query:  115 MDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKARCPCIHLVVDHFGFFLQDGEIDETAWEQVLALSKYPSVFIKTSALFRVAKDPYPYESLKPRFAALIEHFGSNRLLWGSDFPFVSDGQCGYGPAKDVVCNAMGLKEEDVHHITGGTAQALFGSWADDA 870
            MDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTK       LVVDHFGFFLQDGEIDETAW+QVLALSKYPSVFIKTSALFRVAKDPYPYESLKPRFAALIEHFGSNRLLWGSDFPFVSDGQCGYGPAKDVVC+AMGLKEEDVH+ITGGTAQALFGSWADDA
Sbjct:    1 MDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTK-------LVVDHFGFFLQDGEIDETAWKQVLALSKYPSVFIKTSALFRVAKDPYPYESLKPRFAALIEHFGSNRLLWGSDFPFVSDGQCGYGPAKDVVCDAMGLKEEDVHNITGGTAQALFGSWADDA 245          
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Match: Amidohydro-rel (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUE6_9STRA)

HSP 1 Score: 270 bits (690), Expect = 2.930e-84
Identity = 127/249 (51.00%), Postives = 173/249 (69.48%), Query Frame = 1
Query:  115 MDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANP-NLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKARCPCIHLVVDHFGFFLQDGEIDETAWEQVLALSKYPSVFIKTSALFRVAKDPYPYESLKPRFAALIEHFGSNRLLWGSDFPFVSDGQCGYGPAKDVVCNAMGLKEEDVHHITGGTAQALFGSW 858
            MD AG+ GALIVQPIN+ +DHSYV   + +WP +FKGM L  P +++   AC +L+ L  QGFC VRFNPYLWPEG +GM +D G  +++KAGEL +PVG MCFKG  RH  +I ALL  +PQT+A       ++DHFGFF Q+G  ++ +W+Q+LAL++YP V++KTSA FRV+ + YPY  + P+   L++ FG++RL+WGSD+PFV D    Y  A+  +    G+ E D+  I GGTAQ LFG W
Sbjct:    1 MDAAGVSGALIVQPINHLYDHSYVQHCLQQWPQRFKGMGLLQPESVTVQQACTQLQTLQRQGFCSVRFNPYLWPEG-QGMSNDFGRQVYKKAGELKMPVGFMCFKGLRRHYSDITALLQCAPQTQA-------IIDHFGFFRQEGVTEDESWQQLLALAQYPQVYVKTSAFFRVSSEAYPYNDMTPKVLELLDKFGADRLMWGSDYPFVKD-SISYNSARFTL-QGKGISEADLKMIMGGTAQRLFGHW 239          
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Match: Hypothetical (protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6T1Z3Z2_9EUGL)

HSP 1 Score: 264 bits (674), Expect = 1.330e-80
Identity = 135/258 (52.33%), Postives = 176/258 (68.22%), Query Frame = 1
Query:    1 DSHLHIWGEGKPPFPYASGQEPPERLRESCGPETLIQEMDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKARCPCIHLVVDHFGFFLQD---------GEIDETAWEQVLALSKYPSVFIKTSALFRVAKDPYPYESLKPRFAALIEHFGSNRLLWGSDFPFVSDG 747
            DSHLHIW +G+ P+ +    +PP  L+ +   ETLI+ ++ AG+ GAL+VQP N+K+DHSYVLDA+SK P   +GMCLANP L   +A AELERL +QGF  VRFNP L+P+G   +    G ALF KAGEL LPVG+MCF GF      IEAL+ SSP T        +V+DH+GFF Q          G  DE AWE++LAL++YP V++K SALFRV+ +P+P+E LK R   L++ FGS RL+WGSD+PFV+ G
Sbjct:   29 DSHLHIWSDGQAPYQWVV--DPPPELQSTGTYETLIRSLESAGVSGALVVQPANHKYDHSYVLDAISKCPELLRGMCLANPTLPVPEAVAELERLAEQGFVAVRFNPALFPDG---LDSPVGKALFEKAGELVLPVGIMCFSGFTAQAPAIEALMKSSPDTT-------VVIDHWGFFRQPATGGLLGDAGVNDEEAWEKLLALAQYPQVYVKVSALFRVSGEPWPHEDLKLRLQQLLKAFGSYRLMWGSDWPFVTIG 274          
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z3V0_TRICV)

HSP 1 Score: 261 bits (668), Expect = 1.710e-79
Identity = 138/294 (46.94%), Postives = 190/294 (64.63%), Query Frame = 1
Query:    1 DSHLHIWG---EGKPPFPYASGQEPPERLRESCGPETLIQEMDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEGMKDD-TGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKARCPCIHLVVDHFGFFLQDGEIDETAWEQVLALSKYPSVFIKTSALFRVA---KDPYPYESLKPR-FAALIEHFGSNRLLWGSDFPFVSDGQCGYGPAKDVVCNAMGLKEEDVHHITGGTAQALFGSW 858
            DSHLH+W    E    +PYA GQ+PP  L +      L++ MDDAG+ GALIVQPIN+K+DHSYV DA+   P + KGM L +P L P  A + LE L   G+ GVRFNPYLWPEG +  ++   G+A++++ GEL +PVGVMCFKG   H ++I  L+ SSP T        L++DH GF   D E  + A+EQ+L+L+KYP+V +K SALFRVA    DPYP+  ++ R F  L+E FG++RL++G+DFP+V + +  YG A   V ++    E +   + GGTA+ LFG W
Sbjct:   55 DSHLHVWASSSEAAKSYPYAEGQDPPPSLIDRASTSELLKIMDDAGVDGALIVQPINHKYDHSYVTDAVRAHPDRLKGMLLHDPALPPERAVSRLEELTLDGYVGVRFNPYLWPEGAKMSEEGGCGLAVYKRCGELKMPVGVMCFKGLELHYDDIVRLIESSPDTA-------LILDHLGFTGLD-ERGDAAFEQLLSLAKYPNVVVKVSALFRVAGPGSDPYPHNGVRTRRFVPLLEAFGADRLMFGTDFPYVLEQEGSYGGATGTV-SSWATTESERASLMGGTAERLFGPW 339          
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Match: Hypothetical (protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JC00_9EUKA)

HSP 1 Score: 261 bits (666), Expect = 2.730e-79
Identity = 140/297 (47.14%), Postives = 184/297 (61.95%), Query Frame = 1
Query:    1 DSHLHIWGEGKPPFPYASGQEPPERLRESCGPETLIQEMDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKARCPCIHLVVDHFGFFLQ---------DGEIDETAWEQVLALSKYPSVFIKTSALFRVAKDPYPYESLKPRFAALIEHFGSNRLLWGSDFPFVSDGQCG--YGPAKDVVC--NAMGLKEEDVHHITGGTAQALFG 852
            DSHLH+W +G  P+PYA   EPP  LRE+   E  +    +AG+ GAL+VQP N+K+DH+YV DA+ K  G  KGMCLANP LSP +A AEL RLH QGF GVRFNPYL+ +  +GM  D G AL+R+AGEL +PVGVM F G    +  I ALL  SP T        L+VDH GFF Q         +   D+ A+E +L+L+++P V++K SALFR++ +  P+  L+ R   L++ FG+ RL+WGSDFPFV+ G     Y  A ++V   N   L       + GGTA  LFG
Sbjct:   50 DSHLHVWSDGNAPYPYAV--EPPAELREAATTEVFLALAKEAGVAGALVVQPANHKYDHAYVADALRKAGGFLKGMCLANPTLSPEEAVAELTRLHAQGFVGVRFNPYLFSQP-DGMDSDVGRALYRRAGELAMPVGVMAFGGLPAQLPAIRALLAHSPSTL-------LIVDHMGFFRQPASGGLLGANATNDDEAFEGLLSLAQFPQVYVKVSALFRLSAELAPHRDLQARLGRLLDAFGARRLMWGSDFPFVTVGLAAVEYKQAVEIVSFWNMPELDANAYELLMGGTAARLFG 336          
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Match: Hypothetical (protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZEF1_9EUKA)

HSP 1 Score: 258 bits (659), Expect = 7.340e-79
Identity = 130/294 (44.22%), Postives = 183/294 (62.24%), Query Frame = 1
Query:    1 DSHLHIWGEGKPPFPYASGQEPPERLRESCGPETLIQEMDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKARCPCIHLVVDHFGFFLQ--------DGEIDETAWEQVLALSKYPSVFIKTSALFRVAKDPYPYESLKPRFAALIEHFGSNRLLWGSDFPF--VSDGQCGYGPAKDVVCNAMGLKEEDVHHITGGTAQALFG 852
            DSH+H+WG+G+ P+PY +    P+ LR  C  +  ++   +A + GALIVQPINYK+DH+YV   + K+P  +KGM LANP   P  A   L+ L   G+  +RFNPYLW      M DD+G A++++AG+ G+ VGVMCFKG  +H+ +I+ALL  SP+T        LV+DH+GFF Q        + ++ E AW+ +L+LS+YP V +K SALFRV+ +  PYE L+PR   LI+ FG  RL+WGSD+P+  ++ G C    A     +   L E D H I GG A A+FG
Sbjct:   11 DSHIHVWGDGQDPYPYDNPT--PDALRSICDGDKFVKNAKNAKVSGALIVQPINYKYDHTYVTKQLKKYPSFYKGMALANPVTPPEQAGVYLDGLQKDGYVALRFNPYLWSGS---MADDSGKAIYKQAGQKGMAVGVMCFKGLSQHINDIKALLDHSPETT-------LVIDHWGFFRQPATGGTDPETKVSEEAWKDLLSLSEYPQVNVKLSALFRVSGEESPYEDLRPRLNDLIKAFGPGRLMWGSDYPYALMNGGYCASVDALRKWDSDKLLDESDFHKICGGNAAAVFG 292          
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Match: Hypothetical (protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BE33_9STRA)

HSP 1 Score: 259 bits (663), Expect = 1.790e-78
Identity = 132/291 (45.36%), Postives = 189/291 (64.95%), Query Frame = 1
Query:    1 DSHLHIWGEGKPP--FPYASGQEPPERLRESCGPETLIQEMDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKARCPCIHLVVDHFGFFLQDGEIDETAWEQVLALSKYPSVFIKTSALFRVAKD--PYPYESLKPR-FAALIEHFGSNRLLWGSDFPFVSDGQCGYGPAKDVVCNAMGLKEEDVHHITGGTAQALFGSW 858
            DSHLH+W + +    FPY+ G EPP  L  +     LI+ M   G+ GALIVQPIN+K+DHSYV +A++  P  FKGM L +P+    +A  +LE+L   GF GVRFNPYLWPEG     D   VA+ R+  +L +P+G+MCFKG   H ++I +L+  SP T        +V+DHFGF   D + D+  +E++L+L++  +V +K SALFR+A D  P+PYE ++ R F  L+E +G++RLLWG+DFPFV + + GY  A DVV +  G++++D   I GGT++ LFG W
Sbjct:   77 DSHLHVWADEEESKIFPYSPGSEPPPALANAASAARLIETMKSCGVAGALIVQPINHKYDHSYVAEAIAAHPSVFKGMMLHDPSRDAEEAVQDLEQLLLDGFVGVRFNPYLWPEGKRMSDDPAAVAMCRRCADLKVPIGIMCFKGLDLHYDDICSLIRKSPDTP-------IVLDHFGFTGLDEKGDKN-FEKLLSLAEKKNVHVKISALFRIAGDVSPFPYEDVRRRRFVPLLERYGASRLLWGTDFPFVIETEGGYEGAVDVVRSWCGVEQKDAAAILGGTSENLFGKW 359          
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RW45_9STRA)

HSP 1 Score: 257 bits (656), Expect = 1.550e-77
Identity = 130/291 (44.67%), Postives = 183/291 (62.89%), Query Frame = 1
Query:    1 DSHLHIWGEGKPPFPYASGQEPPERLRESCGPETLIQEMDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKARCPCIHLVVDHFGFFLQDGEIDETAWEQVLALSKYPSVFIKTSALFRVAKDPYP----YESLKPRFAALIEHFGSNRLLWGSDFPFVSDGQCGYGPAKDVVCN-AMGLKEEDVHHITGGTAQALFGSW 858
            DSH+H+W  G+  FPYA GQEP E +RE    ETL+Q+MDD+ +  ALIVQPIN+KFDHSY+L  +   P +FKGMCL +PN S   AC+ L ++   G  GVRFNPYLWPEG E + ++ G A F KAG+LG+ VG+MCFKGFG H  EIE L+   P TK        ++DH GF+ Q+G + E  +E++L L ++P+V+IK SA FR ++  +     Y  +  R   +I+ FG +R++ GSD+PFV     GY     +  +  + +  E    +  GTA+++FG W
Sbjct:   77 DSHVHVWSNGEGAFPYAEGQEPDEDIRELGLVETLLQKMDDSCVSSALIVQPINHKFDHSYLLKVIKDHPTRFKGMCLLDPNQSQPQACSFLSKMATSGIVGVRFNPYLWPEG-EKINNEVGAAAFEKAGDLGMAVGIMCFKGFGLHAAEIEDLVARFPNTKC-------IIDHMGFYRQNGVVAEEDFERLLELERFPNVYIKASAFFRNSQYDWSGEVGYPDVGRRLKRIIDTFGGSRVMLGSDYPFVHL-HGGYSGNLMLAYHWKLDISSETFQMLIRGTAESVFGEW 358          
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Match: Amidohydro-rel (domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9Y8_FISSO)

HSP 1 Score: 249 bits (635), Expect = 6.220e-75
Identity = 129/293 (44.03%), Postives = 189/293 (64.51%), Query Frame = 1
Query:    1 DSHLHIWG---EGKPPFPYASGQEPPERLRESCGPETLIQEMDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEG----MKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKARCPCIHLVVDHFGFFLQDGEIDETAWEQVLALSKYPSVFIKTSALFRVAKDPYPYESLKPRFAALIEHFGSNRLLWGSDFPFVSDGQCGYGPAKDVVCNAMGLKEEDVHHITGGTAQALFGSW 858
            DSHLH+W    E    FPY   Q+PP+ L++      L++EM+ AG+ GALIVQPIN+KFDHSYV+ A+  +P +FKGM L +P++S  DA A+L+ L ++GF GVRFNPYLWP+ GE     M    G+AL+++ GEL +PVG+MCF+G   H ++I ALL +S +T        L++DHFGF   D +     ++Q+L+L++YP+V++K SA FR+  +P   +  + RF  L+  FG++RL++GSDFPFV +   GY     V  ++    E +   I GGTA+ +FG W
Sbjct:   40 DSHLHVWASPEEAAAKFPYV--QDPPDSLKDRASASCLLREMEAAGVDGALIVQPINHKFDHSYVIHAIQTYPDRFKGMMLFDPSMSETDAMAQLQELKEKGFVGVRFNPYLWPKLGEKKWSPMSQGVGLALYKRCGELKMPVGIMCFQGLDLHFDDILALLAASSETT-------LILDHFGFTALDSD---ATFDQLLSLAQYPNVYVKISAWFRLNDNPPFTDVRERRFIPLLNAFGADRLMYGSDFPFVLEQPSGYSMVHLV--SSWIENENERRAIMGGTAERVFGVW 318          
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Match: Amidohydro-rel (domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L8V3_PHYPA)

HSP 1 Score: 250 bits (638), Expect = 9.720e-74
Identity = 142/298 (47.65%), Postives = 190/298 (63.76%), Query Frame = 1
Query:    1 DSHLHIWG---EGKPPFPYASGQEPPERLRESCGPETLIQEMDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERL-HDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKARCPCIHLVVDHFGFF---LQDGEIDETAWEQVLALSKYPSVFIKTSALFRVAKDPYPYESLKPRFAALIEHFGSNRLLWGSDFPFVSDGQCGYGPAKDVVCNAMGLK----EEDVHHITGGTAQALF-GSW 858
            DSHLH+W    E K  FPY  GQEP   L  S   + L++ M +AG+ GA+I+QPIN+KFDHSYV   + K+P KF GMCLA+P      A  E+ERL  ++ F GVRFNPYLWP G E M ++ G A+F KAGELG+PVG MCFKG   H++EIE L    P T        +++DH GF    L + E D   W ++L LSKYP V++K SA FRV+++P+PY+   P    L+E +G+NRL+WGSDFPFV+  +CGY  +  V+ +    +    EE++  I GGTA ++F GSW
Sbjct:  163 DSHLHVWASPDEAKK-FPYFPGQEP--TLPGSA--DFLLKNMAEAGVDGAVIIQPINHKFDHSYVSSVLQKYPDKFVGMCLADPTEGGGGA-KEIERLIKEENFKGVRFNPYLWPSG-EKMTNELGKAMFAKAGELGVPVGFMCFKGLMLHIDEIEELCREFPTTT-------VLMDHLGFCKPPLTEEEAD--VWNRLLNLSKYPQVYVKLSAFFRVSREPFPYKDTWPFLKQLLESYGANRLMWGSDFPFVA-AECGYTNSWQVLPSRNSAEAFCSEEELEAIMGGTALSVFKGSW 443          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Amidohydro-rel2.800e-17796.03domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Amidohydro-rel2.930e-8451.00domain-containing protein n=1 Tax=Tribonema minus ... [more]
Hypothetical1.330e-8052.33protein n=1 Tax=Eutreptiella gymnastica TaxID=7302... [more]
Hypothetical1.710e-7946.94protein n=1 Tax=Trieres chinensis TaxID=1514140 Re... [more]
Hypothetical2.730e-7947.14protein n=1 Tax=Calcidiscus leptoporus TaxID=12754... [more]
Hypothetical7.340e-7944.22protein n=1 Tax=Lotharella globosa TaxID=91324 Rep... [more]
Hypothetical1.790e-7845.36protein n=1 Tax=Corethron hystrix TaxID=216773 Rep... [more]
Hypothetical1.550e-7744.67protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Amidohydro-rel6.220e-7544.03domain-containing protein n=2 Tax=Fistulifera sola... [more]
Amidohydro-rel9.720e-7447.65domain-containing protein n=2 Tax=Physcomitrium pa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1069contigEcto-sp9_F_contig1069:17785..21734 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score510.8
Seed ortholog evalue3.7e-142
Seed eggNOG ortholog2880.D7FKX5
EggNOG free text desc.Amidohydrolase
EggNOG OGs28N8S@1,2QUU3@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAmidohydrolase 2
Ec32 orthologEc-17_001730.1
Exons8
Model size1584
Cds size759
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1069.612.1prot_Ecto-sp9_F_contig1069.612.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1069 18496..21620 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928287.1199284-UTR-Ecto-sp9_F_contig1069:17784..184951622928287.1199284-UTR-Ecto-sp9_F_contig1069:17784..18495Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1069 17785..18495 -
1692277822.2503932-UTR-Ecto-sp9_F_contig1069:17784..184951692277822.2503932-UTR-Ecto-sp9_F_contig1069:17784..18495Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1069 17785..18495 -
1622928287.945436-UTR-Ecto-sp9_F_contig1069:21620..217341622928287.945436-UTR-Ecto-sp9_F_contig1069:21620..21734Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1069 21621..21734 -
1692277822.3531933-UTR-Ecto-sp9_F_contig1069:21620..217341692277822.3531933-UTR-Ecto-sp9_F_contig1069:21620..21734Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1069 21621..21734 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928287.1329372-CDS-Ecto-sp9_F_contig1069:18495..186131622928287.1329372-CDS-Ecto-sp9_F_contig1069:18495..18613Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1069 18496..18613 -
1692277822.2703981-CDS-Ecto-sp9_F_contig1069:18495..186131692277822.2703981-CDS-Ecto-sp9_F_contig1069:18495..18613Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1069 18496..18613 -
1622928287.1444168-CDS-Ecto-sp9_F_contig1069:18905..190211622928287.1444168-CDS-Ecto-sp9_F_contig1069:18905..19021Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1069 18906..19021 -
1692277822.2806916-CDS-Ecto-sp9_F_contig1069:18905..190211692277822.2806916-CDS-Ecto-sp9_F_contig1069:18905..19021Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1069 18906..19021 -
1622928287.1547542-CDS-Ecto-sp9_F_contig1069:19537..195861622928287.1547542-CDS-Ecto-sp9_F_contig1069:19537..19586Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1069 19538..19586 -
1692277822.291377-CDS-Ecto-sp9_F_contig1069:19537..195861692277822.291377-CDS-Ecto-sp9_F_contig1069:19537..19586Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1069 19538..19586 -
1622928287.1652162-CDS-Ecto-sp9_F_contig1069:19772..198551622928287.1652162-CDS-Ecto-sp9_F_contig1069:19772..19855Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1069 19773..19855 -
1692277822.3026004-CDS-Ecto-sp9_F_contig1069:19772..198551692277822.3026004-CDS-Ecto-sp9_F_contig1069:19772..19855Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1069 19773..19855 -
1622928287.8090513-CDS-Ecto-sp9_F_contig1069:20112..203251622928287.8090513-CDS-Ecto-sp9_F_contig1069:20112..20325Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1069 20113..20325 -
1692277822.3140337-CDS-Ecto-sp9_F_contig1069:20112..203251692277822.3140337-CDS-Ecto-sp9_F_contig1069:20112..20325Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1069 20113..20325 -
1622928287.9066932-CDS-Ecto-sp9_F_contig1069:20530..206081622928287.9066932-CDS-Ecto-sp9_F_contig1069:20530..20608Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1069 20531..20608 -
1692277822.3254137-CDS-Ecto-sp9_F_contig1069:20530..206081692277822.3254137-CDS-Ecto-sp9_F_contig1069:20530..20608Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1069 20531..20608 -
1622928287.9180439-CDS-Ecto-sp9_F_contig1069:21119..211821622928287.9180439-CDS-Ecto-sp9_F_contig1069:21119..21182Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1069 21120..21182 -
1692277822.3383949-CDS-Ecto-sp9_F_contig1069:21119..211821692277822.3383949-CDS-Ecto-sp9_F_contig1069:21119..21182Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1069 21120..21182 -
1622928287.9318466-CDS-Ecto-sp9_F_contig1069:21581..216201622928287.9318466-CDS-Ecto-sp9_F_contig1069:21581..21620Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1069 21582..21620 -
1692277822.34603-CDS-Ecto-sp9_F_contig1069:21581..216201692277822.34603-CDS-Ecto-sp9_F_contig1069:21581..21620Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1069 21582..21620 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1069.612.1

>prot_Ecto-sp9_F_contig1069.612.1 ID=prot_Ecto-sp9_F_contig1069.612.1|Name=mRNA_Ecto-sp9_F_contig1069.612.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=253bp
MDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDA
CAELERLHDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGV
MCFKGFGRHVEEIEALLLSSPQTKARCPCIHLVVDHFGFFLQDGEIDETA
WEQVLALSKYPSVFIKTSALFRVAKDPYPYESLKPRFAALIEHFGSNRLL
WGSDFPFVSDGQCGYGPAKDVVCNAMGLKEEDVHHITGGTAQALFGSWAD
DA*
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mRNA from alignment at Ecto-sp9_F_contig1069:17785..21734-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1069.612.1 ID=mRNA_Ecto-sp9_F_contig1069.612.1|Name=mRNA_Ecto-sp9_F_contig1069.612.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3950bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1069:17785..21734- (Ectocarpus species9 EcSCA_722f female)
GATTCCCATCTGCATATTTGGGGGGAAGGGAAACCTCCATTTCCGTATGC CTCGGGCCAGGAACCACCGGAAAGGCTGCGTGAATCGTGCGGCCCCGAGA CCCTAATCCAGGAGATGGACGACGCCGGCATCGGGGGTGCGTTAATTGTG CAGGTCAGCTTGAGTTTAGGAGTGACAAAGTACACCAGGCAGCAGCTGGT ATGTGGGCTGTGATGAAAGCACACAAGCCGCACTACTGAGTGAGTAATCT CGGTCCCGTCTAGTCTCAAGGCAGCGCTGAGCTTTTACAAGTTAGTAGTT GCGCTTGACGCTTTAGGCTGGATTGCTGCTTTCCCCCCTGTCCATGGTCC ATAACTCCAGCGTACGGTAGACATTGAGCCCAGAAAAATAGTTTACACGT CAATGATGCCTGGAGCTTTCAGTCACCCAACTGTATACCGACACGGGTTA CATGAACGCCATGTATTTTCCTTCGCTGTTGAGCCAAATCACCCAACAAC CAACGTACATCTGCATGTTTATTTCTGGTTCCGATTTCGCTCTGTCGTGC AGCCCATCAACTACAAGTTCGACCACTCGTACGTGTTGGACGCCATGAGC AAGTGGCCGGGCAAGGTGAGATACTGTAGGTTGAAGGTTATTGAACCCCG CCAATCATCTTTGCGGTGCTACGCTTGCACTGCTGTGTGTTCGAGATCGT CTGCGTACAATTGCCGCCACGAAGCTCCAGAGTACTGCTGGACGTTCTAG TGTAGAGGACTAGGTTTTGTAGCGTTTGCCTACCTGCACGTAGCGAATCC CCCTCGAGCCTCTTGAACGCATGTTGTCTTCCCCTCCAAAAGCTACCAAA TTCCATGTATTGGTCTGTCTGCCTATCTGAACTCTAGCACGACCTGTATT CTGTCAGCCTGGCCAACCAACCAGAGCCTACGAGTGCGAACATGTCGGCA TTTTGGTTGATTCCTTTCGGTCAGTTGAGCAACGTGGTCGTTCACTCTTT TCAAATGCAGCAAAGCCAGCTTTCTTTGCCGTCGTCGCTGCGTAGCGTAC GCTTGGGTCATTGTGGTGCCATCTATCCTCCTTTTCTCCCAATCGCCTGT CTTGATGCTCCTCTTTCTCTCCACAGTTCAAGGGGATGTGCCTGGCAAAC CCAAACTTGAGCCCCCACGATGCATGTGCTGAGCTGGAACGCCTGCATGA CCAGGTGCGAGATACGGTAGTGCGACCCAATGTACGTGCGAGCAACGCTG CCGGTGAGTTCCATGCATAGACCTCGATTGTGGCATTAGTTGCTTTGCAC AAGTCACAACAAGGCAAGAAACACGCGCTCCCTGGACTCGTTGACGATGT TTGTTTGCTGCAGAGATCTTGATTCTCTCGCTCTTTGGTGCAATTGCTGT GGTGTGCAGGGTTTTTGTGGCGTGAGGTTCAATCCCTACCTTTGGCCGGA AGGAGGCGAGGGCATGAAGGATGACACAGGCGTGGCACTCTTTCGAAAGG CGGGCGAGTTAGGCCTTCCCGTCGGCGTGATGTGCTTCAAGGGGTTCGGA CGTCACGTTGAAGAGATTGAGGCGTTGCTGCTCTCATCACCGCAAACCAA GGCAAGGTGTCCATGTATCCATGTATGCGGTGCTTTAGTCCCGGTGGTAT GTATGGGTGCATGGGACGATTCTGTACATTCCCCGTCATGCTCTTGAGTC AGGTTCTGAGTGGAGACGTCCATGTTTTGCTCAGGGAAGCTGTGCGCCTG AAGAAGAACCGAAGAGGCGAATCGCGACGGCTGCGATGTTCTTGTGCCTA CTTGCTTGCTTCCAACGCGCCTTCCCTTCACCGTCTCCAACTGTGAACTG TTATCCTTTTTGGGTGTTTCCTACTGTAGCTGGTGGTGGATCACTTTGGG TTCTTCCTGCAGGATGGAGAGATCGACGAGACGGCATGGGAGCAAGTGCT AGCGTTGTCCAAGTGAGTCAGTTGTTCTCGTGCGTCTCCCTGCTTGGTTT AGGACGTGGTCCATTCGAATGGGCCCGGTGGGTCCTTCGATCATTACTGC GTACTTGCGCTGTTGTCTTGACCATGTCAAAGTTAACAATCACGGTTCGC CTGACACACCGACACCCCGCCTTGCTTGATTGACGGATATGTTGGCAGGT ATCCATCAGTATTCATAAAGACCAGCGCTCTGTTTCGGGTCGCCAAGGTA CGCTCGATTTTTCTCTGGGTGCATATGAGAGGCACTTTCCGAGACTTCTA CGTGTGCCGCGGGTGCGGTTGCTTTCTGGACGACGAAAAAGATGTGAAAT CCTGTGTGTCGTTGCTGCGTTGATTTCTTCTATGCTGCACACGGCCTACA TATACGCTGATTGCCTCGTACTCTGGGCTTGCGAATACGTGAGGTGCTAT GCATGCGTTTTGTGCGACCCCTTGGTCTGGCTGGCAGTGCTCCTAGGCAG CCGTTATGCCTTTGCGTAAGGTGTAGTTCTGTTCTCGTGTTCAGTGTGTC GTTCTTCTCGCATCGGCCTCTGCAAGCAGCAAGCTTTCCCCACATCCGGT TGTTCTCTGGGCTCTGCGTTTGTCATGGGGTTGAACGGCCTTCATCATCA CCTCTTGTCACCGTACGTTGAGTGCTGCCCTCCTTACCCGACGTGAACGT TCTCCGGTTGGTGTAATATTTCGCGCTTTCGCTCATTGCTTCTCCTCTTT GTGTTGACCTCAGGACCCTTATCCGTACGAGAGTCTTAAACCTCGATTCG CAGCGTTGATCGAGCACTTCGGCTCGAATAGGCTTTTGTGGGGAAGCGAC TTCCCCTTCGTCTCGGACGGGCAGTGCGGGTGAGCAACCCGTTTCGTTCG TGTTCATGTTAATGTCAAACTTTCCGGTTCTGCTTGCTCGAGAAATGGTC GAGTCGACCCTCGAGAACTGCCTTGTTCGAGGTTGTTCCGAGGCGACCGC AAGGAATCGCGTTTTTGGTCGTGGAGTTGTATGCTGGTGCCTGGATGTTG CAGAGGGGACATTTTCGTTAAGCTTGACCTGCGCCATCCTCCTTCTTGAC CCTGTCCCTTCTCGTTACCCCCCCCCCCCCGGAACGTTGTGTTGCTATGC CATTTTGTGTCATATCACCAGGTACGGCCCGGCAAAAGACGTTGTGTGCA ATGCCATGGGCCTCAAAGAGGAGGATGTGCACCATATCACCGGCGGCACG GCACAAGCACTCTTTGGCTCTTGGGCGGATGACGCATAGCGCTAGACTGC TTTATTTTGATGTTTTTTCGGACGCAGTTCAGTATATATGGTAGGTGGCA ACACGCCTCTTTTATTTTTCAGTTTTGGAGGGTTTCTATCGTGCTTCCTT GCAGCCGGTGCTGTCGAGGTATCCTCACCGCTTGCATTCGGGGCTGGGTG ATTGTTCTGGAGAGGTACTCGAAGCAATGCTAGGCATGAGGCTAAATGCG AGGTTCTTTCCTACCGTCGGCCTGGTTGATATGTATTTCACGTGAAATAT TGCCCACAAGTGACATCACAATGTAATTTGTGCGGGGGGGTTTCAAGGAA CGATGGTGGAACGGGTCAGTACATAAGCAATGAAGCGGCTTGACCTGACC CCATCTAGAAGTTCGGTGAAATATTTGCTTGAGCTGTACGTGTAGTCTAG GTGTCGACCTAAGCACGGACGGGTGGACGGCAAAAATTGACGTCCGGTGC GTGATATTTTCGGGGTGGCATATCAATGTATCGAGCTTGTCATCAGGTTG AGTTCTGTGCTCCGTACGATGTACTTCGAAGTACAGGGTTAGTCAGACCC CAATGCACGCCAGTCCACGGTGCTATCTTGTCTTTTCGAACCATACGATC AACGAGAAAATGCCGTTAACTTTCGCGGGTTTCTAGTGCTTTGCGCTGTC TGTTACTGCATCAAGATTGGGCAATGAACGTGTTGAAAGCGCTTCCATCT
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1069:17785..21734-

>mRNA_Ecto-sp9_F_contig1069.612.1 ID=mRNA_Ecto-sp9_F_contig1069.612.1|Name=mRNA_Ecto-sp9_F_contig1069.612.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1518bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1069:17785..21734- (Ectocarpus species9 EcSCA_722f female)
ATGGACGACGCCGGCATCGGGGGTGCGTTAATTGTGCAGATGGACGACGC
CGGCATCGGGGGTGCGTTAATTGTGCAGCCCATCAACTACAAGTTCGACC
ACTCGTACGTGTTGGACGCCATGAGCAAGTGGCCGGGCAAGCCCATCAAC
TACAAGTTCGACCACTCGTACGTGTTGGACGCCATGAGCAAGTGGCCGGG
CAAGTTCAAGGGGATGTGCCTGGCAAACCCAAACTTGAGCCCCCACGATG
CATGTGCTGAGCTGGAACGCCTGCATGACCAGTTCAAGGGGATGTGCCTG
GCAAACCCAAACTTGAGCCCCCACGATGCATGTGCTGAGCTGGAACGCCT
GCATGACCAGGGTTTTTGTGGCGTGAGGTTCAATCCCTACCTTTGGCCGG
AAGGAGGCGAGGGCATGAAGGATGACACAGGCGTGGCACTCTTTCGAAAG
GCGGGCGAGTTAGGCCTTCCCGTCGGCGTGATGTGCTTCAAGGGGTTCGG
ACGTCACGTTGAAGAGATTGAGGCGTTGCTGCTCTCATCACCGCAAACCA
AGGCAAGGTGTCCATGTATCCATGGTTTTTGTGGCGTGAGGTTCAATCCC
TACCTTTGGCCGGAAGGAGGCGAGGGCATGAAGGATGACACAGGCGTGGC
ACTCTTTCGAAAGGCGGGCGAGTTAGGCCTTCCCGTCGGCGTGATGTGCT
TCAAGGGGTTCGGACGTCACGTTGAAGAGATTGAGGCGTTGCTGCTCTCA
TCACCGCAAACCAAGGCAAGGTGTCCATGTATCCATCTGGTGGTGGATCA
CTTTGGGTTCTTCCTGCAGGATGGAGAGATCGACGAGACGGCATGGGAGC
AAGTGCTAGCGTTGTCCAACTGGTGGTGGATCACTTTGGGTTCTTCCTGC
AGGATGGAGAGATCGACGAGACGGCATGGGAGCAAGTGCTAGCGTTGTCC
AAGTATCCATCAGTATTCATAAAGACCAGCGCTCTGTTTCGGGTCGCCAA
GGTATCCATCAGTATTCATAAAGACCAGCGCTCTGTTTCGGGTCGCCAAG
GACCCTTATCCGTACGAGAGTCTTAAACCTCGATTCGCAGCGTTGATCGA
GCACTTCGGCTCGAATAGGCTTTTGTGGGGAAGCGACTTCCCCTTCGTCT
CGGACGGGCAGTGCGGGACCCTTATCCGTACGAGAGTCTTAAACCTCGAT
TCGCAGCGTTGATCGAGCACTTCGGCTCGAATAGGCTTTTGTGGGGAAGC
GACTTCCCCTTCGTCTCGGACGGGCAGTGCGGGTACGGCCCGGCAAAAGA
CGTTGTGTGCAATGCCATGGGCCTCAAAGAGGAGGATGTGCACCATATCA
CCGGCGGCACGGCACAAGCACTCTTTGGCTCTTGGGCGGATGACGCATAG
GTACGGCCCGGCAAAAGACGTTGTGTGCAATGCCATGGGCCTCAAAGAGG
AGGATGTGCACCATATCACCGGCGGCACGGCACAAGCACTCTTTGGCTCT
TGGGCGGATGACGCATAG
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