mRNA_Ecto-sp9_F_contig1069.612.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Match: Amidohydro-rel (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKX5_ECTSI) HSP 1 Score: 507 bits (1306), Expect = 2.800e-177 Identity = 242/252 (96.03%), Postives = 245/252 (97.22%), Query Frame = 1
Query: 115 MDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKARCPCIHLVVDHFGFFLQDGEIDETAWEQVLALSKYPSVFIKTSALFRVAKDPYPYESLKPRFAALIEHFGSNRLLWGSDFPFVSDGQCGYGPAKDVVCNAMGLKEEDVHHITGGTAQALFGSWADDA 870
MDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTK LVVDHFGFFLQDGEIDETAW+QVLALSKYPSVFIKTSALFRVAKDPYPYESLKPRFAALIEHFGSNRLLWGSDFPFVSDGQCGYGPAKDVVC+AMGLKEEDVH+ITGGTAQALFGSWADDA
Sbjct: 1 MDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTK-------LVVDHFGFFLQDGEIDETAWKQVLALSKYPSVFIKTSALFRVAKDPYPYESLKPRFAALIEHFGSNRLLWGSDFPFVSDGQCGYGPAKDVVCDAMGLKEEDVHNITGGTAQALFGSWADDA 245
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Match: Amidohydro-rel (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUE6_9STRA) HSP 1 Score: 270 bits (690), Expect = 2.930e-84 Identity = 127/249 (51.00%), Postives = 173/249 (69.48%), Query Frame = 1
Query: 115 MDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANP-NLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKARCPCIHLVVDHFGFFLQDGEIDETAWEQVLALSKYPSVFIKTSALFRVAKDPYPYESLKPRFAALIEHFGSNRLLWGSDFPFVSDGQCGYGPAKDVVCNAMGLKEEDVHHITGGTAQALFGSW 858
MD AG+ GALIVQPIN+ +DHSYV + +WP +FKGM L P +++ AC +L+ L QGFC VRFNPYLWPEG +GM +D G +++KAGEL +PVG MCFKG RH +I ALL +PQT+A ++DHFGFF Q+G ++ +W+Q+LAL++YP V++KTSA FRV+ + YPY + P+ L++ FG++RL+WGSD+PFV D Y A+ + G+ E D+ I GGTAQ LFG W
Sbjct: 1 MDAAGVSGALIVQPINHLYDHSYVQHCLQQWPQRFKGMGLLQPESVTVQQACTQLQTLQRQGFCSVRFNPYLWPEG-QGMSNDFGRQVYKKAGELKMPVGFMCFKGLRRHYSDITALLQCAPQTQA-------IIDHFGFFRQEGVTEDESWQQLLALAQYPQVYVKTSAFFRVSSEAYPYNDMTPKVLELLDKFGADRLMWGSDYPFVKD-SISYNSARFTL-QGKGISEADLKMIMGGTAQRLFGHW 239
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Match: Hypothetical (protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6T1Z3Z2_9EUGL) HSP 1 Score: 264 bits (674), Expect = 1.330e-80 Identity = 135/258 (52.33%), Postives = 176/258 (68.22%), Query Frame = 1
Query: 1 DSHLHIWGEGKPPFPYASGQEPPERLRESCGPETLIQEMDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKARCPCIHLVVDHFGFFLQD---------GEIDETAWEQVLALSKYPSVFIKTSALFRVAKDPYPYESLKPRFAALIEHFGSNRLLWGSDFPFVSDG 747
DSHLHIW +G+ P+ + +PP L+ + ETLI+ ++ AG+ GAL+VQP N+K+DHSYVLDA+SK P +GMCLANP L +A AELERL +QGF VRFNP L+P+G + G ALF KAGEL LPVG+MCF GF IEAL+ SSP T +V+DH+GFF Q G DE AWE++LAL++YP V++K SALFRV+ +P+P+E LK R L++ FGS RL+WGSD+PFV+ G
Sbjct: 29 DSHLHIWSDGQAPYQWVV--DPPPELQSTGTYETLIRSLESAGVSGALVVQPANHKYDHSYVLDAISKCPELLRGMCLANPTLPVPEAVAELERLAEQGFVAVRFNPALFPDG---LDSPVGKALFEKAGELVLPVGIMCFSGFTAQAPAIEALMKSSPDTT-------VVIDHWGFFRQPATGGLLGDAGVNDEEAWEKLLALAQYPQVYVKVSALFRVSGEPWPHEDLKLRLQQLLKAFGSYRLMWGSDWPFVTIG 274
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z3V0_TRICV) HSP 1 Score: 261 bits (668), Expect = 1.710e-79 Identity = 138/294 (46.94%), Postives = 190/294 (64.63%), Query Frame = 1
Query: 1 DSHLHIWG---EGKPPFPYASGQEPPERLRESCGPETLIQEMDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEGMKDD-TGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKARCPCIHLVVDHFGFFLQDGEIDETAWEQVLALSKYPSVFIKTSALFRVA---KDPYPYESLKPR-FAALIEHFGSNRLLWGSDFPFVSDGQCGYGPAKDVVCNAMGLKEEDVHHITGGTAQALFGSW 858
DSHLH+W E +PYA GQ+PP L + L++ MDDAG+ GALIVQPIN+K+DHSYV DA+ P + KGM L +P L P A + LE L G+ GVRFNPYLWPEG + ++ G+A++++ GEL +PVGVMCFKG H ++I L+ SSP T L++DH GF D E + A+EQ+L+L+KYP+V +K SALFRVA DPYP+ ++ R F L+E FG++RL++G+DFP+V + + YG A V ++ E + + GGTA+ LFG W
Sbjct: 55 DSHLHVWASSSEAAKSYPYAEGQDPPPSLIDRASTSELLKIMDDAGVDGALIVQPINHKYDHSYVTDAVRAHPDRLKGMLLHDPALPPERAVSRLEELTLDGYVGVRFNPYLWPEGAKMSEEGGCGLAVYKRCGELKMPVGVMCFKGLELHYDDIVRLIESSPDTA-------LILDHLGFTGLD-ERGDAAFEQLLSLAKYPNVVVKVSALFRVAGPGSDPYPHNGVRTRRFVPLLEAFGADRLMFGTDFPYVLEQEGSYGGATGTV-SSWATTESERASLMGGTAERLFGPW 339
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Match: Hypothetical (protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JC00_9EUKA) HSP 1 Score: 261 bits (666), Expect = 2.730e-79 Identity = 140/297 (47.14%), Postives = 184/297 (61.95%), Query Frame = 1
Query: 1 DSHLHIWGEGKPPFPYASGQEPPERLRESCGPETLIQEMDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKARCPCIHLVVDHFGFFLQ---------DGEIDETAWEQVLALSKYPSVFIKTSALFRVAKDPYPYESLKPRFAALIEHFGSNRLLWGSDFPFVSDGQCG--YGPAKDVVC--NAMGLKEEDVHHITGGTAQALFG 852
DSHLH+W +G P+PYA EPP LRE+ E + +AG+ GAL+VQP N+K+DH+YV DA+ K G KGMCLANP LSP +A AEL RLH QGF GVRFNPYL+ + +GM D G AL+R+AGEL +PVGVM F G + I ALL SP T L+VDH GFF Q + D+ A+E +L+L+++P V++K SALFR++ + P+ L+ R L++ FG+ RL+WGSDFPFV+ G Y A ++V N L + GGTA LFG
Sbjct: 50 DSHLHVWSDGNAPYPYAV--EPPAELREAATTEVFLALAKEAGVAGALVVQPANHKYDHAYVADALRKAGGFLKGMCLANPTLSPEEAVAELTRLHAQGFVGVRFNPYLFSQP-DGMDSDVGRALYRRAGELAMPVGVMAFGGLPAQLPAIRALLAHSPSTL-------LIVDHMGFFRQPASGGLLGANATNDDEAFEGLLSLAQFPQVYVKVSALFRLSAELAPHRDLQARLGRLLDAFGARRLMWGSDFPFVTVGLAAVEYKQAVEIVSFWNMPELDANAYELLMGGTAARLFG 336
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Match: Hypothetical (protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZEF1_9EUKA) HSP 1 Score: 258 bits (659), Expect = 7.340e-79 Identity = 130/294 (44.22%), Postives = 183/294 (62.24%), Query Frame = 1
Query: 1 DSHLHIWGEGKPPFPYASGQEPPERLRESCGPETLIQEMDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKARCPCIHLVVDHFGFFLQ--------DGEIDETAWEQVLALSKYPSVFIKTSALFRVAKDPYPYESLKPRFAALIEHFGSNRLLWGSDFPF--VSDGQCGYGPAKDVVCNAMGLKEEDVHHITGGTAQALFG 852
DSH+H+WG+G+ P+PY + P+ LR C + ++ +A + GALIVQPINYK+DH+YV + K+P +KGM LANP P A L+ L G+ +RFNPYLW M DD+G A++++AG+ G+ VGVMCFKG +H+ +I+ALL SP+T LV+DH+GFF Q + ++ E AW+ +L+LS+YP V +K SALFRV+ + PYE L+PR LI+ FG RL+WGSD+P+ ++ G C A + L E D H I GG A A+FG
Sbjct: 11 DSHIHVWGDGQDPYPYDNPT--PDALRSICDGDKFVKNAKNAKVSGALIVQPINYKYDHTYVTKQLKKYPSFYKGMALANPVTPPEQAGVYLDGLQKDGYVALRFNPYLWSGS---MADDSGKAIYKQAGQKGMAVGVMCFKGLSQHINDIKALLDHSPETT-------LVIDHWGFFRQPATGGTDPETKVSEEAWKDLLSLSEYPQVNVKLSALFRVSGEESPYEDLRPRLNDLIKAFGPGRLMWGSDYPYALMNGGYCASVDALRKWDSDKLLDESDFHKICGGNAAAVFG 292
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Match: Hypothetical (protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BE33_9STRA) HSP 1 Score: 259 bits (663), Expect = 1.790e-78 Identity = 132/291 (45.36%), Postives = 189/291 (64.95%), Query Frame = 1
Query: 1 DSHLHIWGEGKPP--FPYASGQEPPERLRESCGPETLIQEMDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKARCPCIHLVVDHFGFFLQDGEIDETAWEQVLALSKYPSVFIKTSALFRVAKD--PYPYESLKPR-FAALIEHFGSNRLLWGSDFPFVSDGQCGYGPAKDVVCNAMGLKEEDVHHITGGTAQALFGSW 858
DSHLH+W + + FPY+ G EPP L + LI+ M G+ GALIVQPIN+K+DHSYV +A++ P FKGM L +P+ +A +LE+L GF GVRFNPYLWPEG D VA+ R+ +L +P+G+MCFKG H ++I +L+ SP T +V+DHFGF D + D+ +E++L+L++ +V +K SALFR+A D P+PYE ++ R F L+E +G++RLLWG+DFPFV + + GY A DVV + G++++D I GGT++ LFG W
Sbjct: 77 DSHLHVWADEEESKIFPYSPGSEPPPALANAASAARLIETMKSCGVAGALIVQPINHKYDHSYVAEAIAAHPSVFKGMMLHDPSRDAEEAVQDLEQLLLDGFVGVRFNPYLWPEGKRMSDDPAAVAMCRRCADLKVPIGIMCFKGLDLHYDDICSLIRKSPDTP-------IVLDHFGFTGLDEKGDKN-FEKLLSLAEKKNVHVKISALFRIAGDVSPFPYEDVRRRRFVPLLERYGASRLLWGTDFPFVIETEGGYEGAVDVVRSWCGVEQKDAAAILGGTSENLFGKW 359
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RW45_9STRA) HSP 1 Score: 257 bits (656), Expect = 1.550e-77 Identity = 130/291 (44.67%), Postives = 183/291 (62.89%), Query Frame = 1
Query: 1 DSHLHIWGEGKPPFPYASGQEPPERLRESCGPETLIQEMDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKARCPCIHLVVDHFGFFLQDGEIDETAWEQVLALSKYPSVFIKTSALFRVAKDPYP----YESLKPRFAALIEHFGSNRLLWGSDFPFVSDGQCGYGPAKDVVCN-AMGLKEEDVHHITGGTAQALFGSW 858
DSH+H+W G+ FPYA GQEP E +RE ETL+Q+MDD+ + ALIVQPIN+KFDHSY+L + P +FKGMCL +PN S AC+ L ++ G GVRFNPYLWPEG E + ++ G A F KAG+LG+ VG+MCFKGFG H EIE L+ P TK ++DH GF+ Q+G + E +E++L L ++P+V+IK SA FR ++ + Y + R +I+ FG +R++ GSD+PFV GY + + + + E + GTA+++FG W
Sbjct: 77 DSHVHVWSNGEGAFPYAEGQEPDEDIRELGLVETLLQKMDDSCVSSALIVQPINHKFDHSYLLKVIKDHPTRFKGMCLLDPNQSQPQACSFLSKMATSGIVGVRFNPYLWPEG-EKINNEVGAAAFEKAGDLGMAVGIMCFKGFGLHAAEIEDLVARFPNTKC-------IIDHMGFYRQNGVVAEEDFERLLELERFPNVYIKASAFFRNSQYDWSGEVGYPDVGRRLKRIIDTFGGSRVMLGSDYPFVHL-HGGYSGNLMLAYHWKLDISSETFQMLIRGTAESVFGEW 358
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Match: Amidohydro-rel (domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9Y8_FISSO) HSP 1 Score: 249 bits (635), Expect = 6.220e-75 Identity = 129/293 (44.03%), Postives = 189/293 (64.51%), Query Frame = 1
Query: 1 DSHLHIWG---EGKPPFPYASGQEPPERLRESCGPETLIQEMDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERLHDQGFCGVRFNPYLWPEGGEG----MKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKARCPCIHLVVDHFGFFLQDGEIDETAWEQVLALSKYPSVFIKTSALFRVAKDPYPYESLKPRFAALIEHFGSNRLLWGSDFPFVSDGQCGYGPAKDVVCNAMGLKEEDVHHITGGTAQALFGSW 858
DSHLH+W E FPY Q+PP+ L++ L++EM+ AG+ GALIVQPIN+KFDHSYV+ A+ +P +FKGM L +P++S DA A+L+ L ++GF GVRFNPYLWP+ GE M G+AL+++ GEL +PVG+MCF+G H ++I ALL +S +T L++DHFGF D + ++Q+L+L++YP+V++K SA FR+ +P + + RF L+ FG++RL++GSDFPFV + GY V ++ E + I GGTA+ +FG W
Sbjct: 40 DSHLHVWASPEEAAAKFPYV--QDPPDSLKDRASASCLLREMEAAGVDGALIVQPINHKFDHSYVIHAIQTYPDRFKGMMLFDPSMSETDAMAQLQELKEKGFVGVRFNPYLWPKLGEKKWSPMSQGVGLALYKRCGELKMPVGIMCFQGLDLHFDDILALLAASSETT-------LILDHFGFTALDSD---ATFDQLLSLAQYPNVYVKISAWFRLNDNPPFTDVRERRFIPLLNAFGADRLMYGSDFPFVLEQPSGYSMVHLV--SSWIENENERRAIMGGTAERVFGVW 318
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Match: Amidohydro-rel (domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L8V3_PHYPA) HSP 1 Score: 250 bits (638), Expect = 9.720e-74 Identity = 142/298 (47.65%), Postives = 190/298 (63.76%), Query Frame = 1
Query: 1 DSHLHIWG---EGKPPFPYASGQEPPERLRESCGPETLIQEMDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDACAELERL-HDQGFCGVRFNPYLWPEGGEGMKDDTGVALFRKAGELGLPVGVMCFKGFGRHVEEIEALLLSSPQTKARCPCIHLVVDHFGFF---LQDGEIDETAWEQVLALSKYPSVFIKTSALFRVAKDPYPYESLKPRFAALIEHFGSNRLLWGSDFPFVSDGQCGYGPAKDVVCNAMGLK----EEDVHHITGGTAQALF-GSW 858
DSHLH+W E K FPY GQEP L S + L++ M +AG+ GA+I+QPIN+KFDHSYV + K+P KF GMCLA+P A E+ERL ++ F GVRFNPYLWP G E M ++ G A+F KAGELG+PVG MCFKG H++EIE L P T +++DH GF L + E D W ++L LSKYP V++K SA FRV+++P+PY+ P L+E +G+NRL+WGSDFPFV+ +CGY + V+ + + EE++ I GGTA ++F GSW
Sbjct: 163 DSHLHVWASPDEAKK-FPYFPGQEP--TLPGSA--DFLLKNMAEAGVDGAVIIQPINHKFDHSYVSSVLQKYPDKFVGMCLADPTEGGGGA-KEIERLIKEENFKGVRFNPYLWPSG-EKMTNELGKAMFAKAGELGVPVGFMCFKGLMLHIDEIEELCREFPTTT-------VLMDHLGFCKPPLTEEEAD--VWNRLLNLSKYPQVYVKLSAFFRVSREPFPYKDTWPFLKQLLESYGANRLMWGSDFPFVA-AECGYTNSWQVLPSRNSAEAFCSEEELEAIMGGTALSVFKGSW 443 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1069.612.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig1069.612.1 >prot_Ecto-sp9_F_contig1069.612.1 ID=prot_Ecto-sp9_F_contig1069.612.1|Name=mRNA_Ecto-sp9_F_contig1069.612.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=253bp MDDAGIGGALIVQPINYKFDHSYVLDAMSKWPGKFKGMCLANPNLSPHDAback to top mRNA from alignment at Ecto-sp9_F_contig1069:17785..21734- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig1069.612.1 ID=mRNA_Ecto-sp9_F_contig1069.612.1|Name=mRNA_Ecto-sp9_F_contig1069.612.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3950bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1069:17785..21734- (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1069:17785..21734- >mRNA_Ecto-sp9_F_contig1069.612.1 ID=mRNA_Ecto-sp9_F_contig1069.612.1|Name=mRNA_Ecto-sp9_F_contig1069.612.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1518bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1069:17785..21734- (Ectocarpus species9 EcSCA_722f female)back to top |