mRNA_Ecto-sp9_F_contig1048.452.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1048.452.1
Unique NamemRNA_Ecto-sp9_F_contig1048.452.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig1048.452.1 vs.
Match: Glycerophosphocholine (acyltransferase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ84_ECTSI)

HSP 1 Score: 583 bits (1502), Expect = 1.120e-199
Identity = 315/344 (91.57%), Postives = 317/344 (92.15%), Query Frame = 1
Query:    1 QFWCMVAIFVMPHSCRLLKSIFIFVMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRWYPLDPMRGGTAGAEPECQDSIDMGDVGTAMAMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNPMHKVVLALMRKIGMFKEDETFDPTTFKTKMIFMGSQLVFTVLVSVPTPFLYNSKWASISLAFFVFLCALWNSSNYYIEVFSRRYWQSMEAESAAKAEALVVKATRQRERERLRSGEDGIAAGGQMLSASSGGSGEDLADDDYEDGEDWEEEADAAPAADEXXXXXXXXXXXXXXXXXXXXDMDGLLGGEVGAAADENPGQEKSKDV 1032
            QFWCMVAIFVMPHSCRLLKSIFIFVMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRWYPLDPMRGGTAGAEPECQD  DMGDVGTAM MYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNPMHK+VLALMRK GMFKEDETFDPTTFKTKMIFMGSQLVFTVLVS+PTPFLYNSKWASISLAFFVFLCALWNSSNYYIEVFSRRYWQSMEAESAAKAEALVVKATRQRERERLRSGEDGIAAGGQMLSASSGGSGEDLADDDYE                 XXXXXXXXXXXXXXX     DMDGL GGEVGAAADENPGQEKSKDV
Sbjct:  207 QFWCMVAIFVMPHSCRLLKSIFIFVMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRWYPLDPMRGGTAGAEPECQDGFDMGDVGTAMGMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNPMHKIVLALMRKTGMFKEDETFDPTTFKTKMIFMGSQLVFTVLVSLPTPFLYNSKWASISLAFFVFLCALWNSSNYYIEVFSRRYWQSMEAESAAKAEALVVKATRQRERERLRSGEDGIAAGGQMLSASSGGSGEDLADDDYE----------XXXXXXXXXXXXXXXXXXXXXXAEAVGDMDGLFGGEVGAAADENPGQEKSKDV 540          
BLAST of mRNA_Ecto-sp9_F_contig1048.452.1 vs.
Match: Glycerophosphocholine (acyltransferase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMU1_9STRA)

HSP 1 Score: 244 bits (622), Expect = 2.150e-69
Identity = 110/225 (48.89%), Postives = 152/225 (67.56%), Query Frame = 1
Query:    7 WCMVAIFVMPHSCRLLKSIFIFVMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRWYPLDPMRGGTAGAEPECQDSIDMGDVGTAMAMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNPMHKVVLALMRKIGMFKEDETFDPTTFKTKMIFMGSQLVFTVLVSVPTPFLYNSKWASISLAFFVFLCALWNSSNYYIEVFSRRYWQSME 681
            +CMV ++V P SC  +K  F+F  G L+WA+P WRNSLVFHD++K +S ++H FP+ L L+ RW+          G  P+C D++ + D G AMA+Y AWQ++YF KTE+ D+P L ADP +QTSLRWLTT   N +HK+VL   R++ +   DETF+P+T KTK+IFM +Q+ FTV+   P P LY S  A  +    +F CA+WN  N+YIEVF+RRYW  +E
Sbjct:  156 FCMVQLYVFPDSCMGMKLAFLFANGPLIWAIPSWRNSLVFHDMEKTSSVYVHFFPALLTLSTRWHATWQHGAAPPGGAPQCDDTVTLLDFGLAMAVYTAWQIVYFIKTEVVDRPILLADPALQTSLRWLTTDSKNALHKLVLLAARRMRIMARDETFEPSTLKTKIIFMSTQMAFTVVTMAPVPALYASYPAHAAFVLAMFGCAVWNGGNFYIEVFARRYWADLE 380          
BLAST of mRNA_Ecto-sp9_F_contig1048.452.1 vs.
Match: Glycerophosphocholine (acyltransferase 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS45_9STRA)

HSP 1 Score: 206 bits (525), Expect = 1.480e-55
Identity = 100/222 (45.05%), Postives = 146/222 (65.77%), Query Frame = 1
Query:    1 QFWCMVAIFVMPHSCRLLKSIFIFVMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRWYPLDPMRGGTAGAEPECQDSIDMGDVGTAMAMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNPMHKVVLALMRKIGMFKEDETFDPTTFKTKMIFMGSQLVFTVLVSVPTPFLYNSKWASISLAFFVFLCALWNSSNYYIEVFSRRY 666
            Q  C++ ++  P +C LLKSIF+   G L +AVP+WRNSLVFHD++K+TS +IH++P  L   LRWYP  P    +A A  +   S+D+ D+  A  +YLAWQ++Y+ K EI D+ +L+ADPE+QTSLRWL     N +H++VL L R  G+   DE FD  T KTK IF+ +Q ++T+L  +P   +Y+S    ++    +F  A++N +NYYI+VFS RY
Sbjct:  209 QVLCILQLYAFPSNCNLLKSIFLLANGPLAFAVPVWRNSLVFHDLEKITSLYIHVYPGLLLYALRWYPSSP----SAAATLDACGSMDVKDLLPAAVVYLAWQIMYYVKIEILDRARLEADPELQTSLRWLAKDHKNALHRLVLRLTRATGVLAPDERFDHRTLKTKSIFILTQFIYTLLTCLPALVIYHSFQLHVAYGLGMFTVAVFNGANYYIDVFSVRY 426          
BLAST of mRNA_Ecto-sp9_F_contig1048.452.1 vs.
Match: Glycerophosphocholine (acyltransferase 1 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DIY4_THETB)

HSP 1 Score: 196 bits (497), Expect = 1.300e-51
Identity = 102/234 (43.59%), Postives = 142/234 (60.68%), Query Frame = 1
Query:    1 QFWCMVAIFVMPHSCRLLKSIFIFVMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRWYPLDP------MRGGTAGAEPECQDS---IDMGDVG---TAMAMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNPMHKVVLALMRKIGMFKEDETFDPTTFKTKMIFMGSQLVFTVLVSVPTPFLYNSKWASISLAFFVFLCALWNSSNYYIEVFSRRY 666
            Q  C+++++    +     +IF    G LLWA+P WR S+VFH +DK+TS FIH FP+ L  TL WYP  P          T  AE     S     +  VG     MA+YL WQVLY++KTE+ D+ K +AD  + TSLRWL+    NPMHK+VL+L+R+IG+    E FD +T KTK+IFM +Q V+TV+  +P P +Y+S    I+L   +   +LWN +N+Y +VFSRRY
Sbjct:  191 QALCLISVWTPASATEWHAAIFTLANGPLLWAIPTWRCSMVFHSLDKVTSVFIHAFPAMLTFTLHWYPAVPEGVSLATAATTQWAEYNTMASHFHAPISFVGWFVMPMAIYLVWQVLYYYKTEVRDRSKFEADKTLTTSLRWLSADDKNPMHKLVLSLLRRIGVMGPTEKFDASTVKTKVIFMATQFVYTVITILPIPIIYSSVHLHIALLVALLGVSLWNGANFYFDVFSRRY 424          
BLAST of mRNA_Ecto-sp9_F_contig1048.452.1 vs.
Match: Glycerophosphocholine (acyltransferase 1 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYG3_9STRA)

HSP 1 Score: 184 bits (466), Expect = 3.230e-48
Identity = 94/222 (42.34%), Postives = 133/222 (59.91%), Query Frame = 1
Query:   40 SCRLLKSIFIFVMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRWY----PLDPMRGGTAGAEPECQDSIDMGDVGTAMAMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNPMHKVVLALMRKIGMFKEDETFDPTTFKTKMIFMGSQLVFTVLVSVPTPFLYNSKWASISLAFFVFLCALWNSSNYYIEVFSRRYWQSMEAESA 693
            S  L + +FI+  G L+WAV LWRNSLVFHDVD+M+  FIHL P  L  +++W+    PL    G +        DS+++ D G A   YL WQ LYF KTE+ D+ KLDA P++ TSLRWLTT   N     VLA+ R+IG+    E +DP T KTK+IF+  Q V+T    +PT  ++ S +       F+F  A+ N ++YY EVF++ Y + +  ++A
Sbjct:  142 STHLFRVLFIYANGPLVWAVVLWRNSLVFHDVDRMSGVFIHLMPCLLYYSIQWFGCASPLSIFSGSSGQPASGPVDSLELADFGYATIGYLIWQTLYFAKTEVVDREKLDARPDLLTSLRWLTTDKKNGFSLFVLAICRQIGVMGRTEEYDPKTTKTKIIFVTGQFVYTFCTFLPTILIFRSHFLHCLYIQFIFAAAVHNGASYYFEVFAKIYQKKLVPDAA 363          
BLAST of mRNA_Ecto-sp9_F_contig1048.452.1 vs.
Match: Glycerophosphocholine (acyltransferase 1 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LCA6_9STRA)

HSP 1 Score: 181 bits (459), Expect = 6.060e-47
Identity = 95/211 (45.02%), Postives = 129/211 (61.14%), Query Frame = 1
Query:   40 SCRLLKSIFIFVMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRWYPLDPMRG--GTAGAEPECQDSIDMGDVGTAMAMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNPMHKVVLALMRKIGMFKEDETFDPTTFKTKMIFMGSQLVFTVLVSVPTPFLYNSKWASISLAFFVFLCALWNSSNYYIEVFSRRY 666
            S R  + +FI+  G L+WAV LWRNSLVFHDVD+M+  FIHL P  L   +RWY   P+         +P   DS+D+ D   A  +YL WQ  YF KTE+ D+ KLDA PE+ TSLRWLTT   N     VL+L R + +    E ++  T KTK+IF+ +QLV+T+    PTPFL+ S +   +   F+F  A+ N ++YYIEVF++ Y
Sbjct:  171 SDRFFRVLFIYANGPLVWAVVLWRNSLVFHDVDRMSGVFIHLMPCLLYYAIRWYGCAPLFALPRFPSTDPP-HDSLDVVDFTFATILYLFWQACYFVKTEMFDREKLDARPELLTSLRWLTTDKKNGFSLFVLSLCRAMRVMGPTEEYNSRTTKTKLIFLAAQLVYTLGTFAPTPFLFRSHFVHCAYIQFIFAAAVHNGASYYIEVFAKMY 380          
BLAST of mRNA_Ecto-sp9_F_contig1048.452.1 vs.
Match: Transmembrane (protein n=1 Tax=Terrestrivirus sp. TaxID=2487775 RepID=A0A3G4ZKU8_9VIRU)

HSP 1 Score: 175 bits (443), Expect = 8.360e-47
Identity = 92/205 (44.88%), Postives = 120/205 (58.54%), Query Frame = 1
Query:   64 FIFVMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRWYPLDPMRGGTAGAEPECQDSIDM-GDVGTAMAMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNPMHKVVLALMRKIGMFKEDETFDPTTFKTKMIFMGSQLVFTVLVSVPTPFLYNSKWASISLAFFVFLCALWNSSNYYIEVFSRRYWQS 675
            F+F  G L WA+  WRNS VFH VDK+TS +IHLFP++L    RWY              E   S+DM   +   + +Y  WQV Y  KTE  DK KLD D  IQTSLRW+++   N MHK +L ++RK+ +    E FD TT KTK IF+ SQ +FT+L  +P PF++ S   +     F+   A++N  NYYIEVFS RY  S
Sbjct:   20 FMFTNGPLAWAIVTWRNSFVFHSVDKITSVYIHLFPAFLLFCTRWY-----------GNYEVDFSMDMIPTLSWCITLYCMWQVCYILKTEYFDKDKLDNDCTIQTSLRWMSSDTKNSMHKFILRILRKVRIMGPTEEFDATTKKTKFIFVLSQFLFTLLTFIPVPFMFQSFILNCLFLVFLLSIAIYNGGNYYIEVFSSRYEHS 213          
BLAST of mRNA_Ecto-sp9_F_contig1048.452.1 vs.
Match: Glycerophosphocholine (acyltransferase 1 n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VCE2_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.700e-46
Identity = 95/215 (44.19%), Postives = 126/215 (58.60%), Query Frame = 1
Query:   46 RLLKSIFIFVMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRWYP-------LDPMRGGTAGAEPE-CQDSIDMGDVGTAMAMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNPMHKVVLALMRKIGMFKEDETFDPTTFKTKMIFMGSQLVFTVLVSVPTPFLYNSKWASISLAFFVFLCALWNSSNYYIEVFSRRY 666
            RL + +FI+  G LLWAV LWRNSLVFHD+D+M+  FIH+ P  L   + W+        L P         P   QDS+D  D   A+  YL WQVLYF KTE+ D+  LDA P++ TSLRWLTT   N    +VL L R  G+    E +DP T KTK IF+ +QLV+TV+   PTP L+ S +        +F+ A+ N ++YY EVF++ Y
Sbjct:   51 RLFRVLFIYANGPLLWAVVLWRNSLVFHDIDRMSGVFIHIMPCLLYYCVHWHGCSSSSMLLHPPPSVNYFLPPSHAQDSLDGVDFAYAIIGYLIWQVLYFVKTEVVDRAALDARPDLLTSLRWLTTDRKNGFSLLVLGLCRYGGIMGPTEAYDPRTTKTKAIFVAAQLVYTVVTFAPTPLLFTSHFLHCMYIQLIFVAAVHNGASYYFEVFAKLY 265          
BLAST of mRNA_Ecto-sp9_F_contig1048.452.1 vs.
Match: Glycerophosphocholine (acyltransferase 1 n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397CAQ5_9STRA)

HSP 1 Score: 176 bits (445), Expect = 3.360e-45
Identity = 94/215 (43.72%), Postives = 126/215 (58.60%), Query Frame = 1
Query:   46 RLLKSIFIFVMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRWYP-------LDPMRGGTAGAEPE-CQDSIDMGDVGTAMAMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNPMHKVVLALMRKIGMFKEDETFDPTTFKTKMIFMGSQLVFTVLVSVPTPFLYNSKWASISLAFFVFLCALWNSSNYYIEVFSRRY 666
            RL + +FI+  G L+WAV LWRNSLVFHD+D+M+  FIH+ P  L   + W+        L P         P   QDS+D  D   A+  YL WQVLYF KTE+ D+  LDA P++ TSLRWLTT   N    +VL L R  G+    E +DP T KTK IF+ +QLV+TV+   PTP L+ S +        +F+ A+ N ++YY EVF++ Y
Sbjct:  130 RLFRVLFIYANGPLVWAVVLWRNSLVFHDIDRMSGVFIHIMPCLLYYCVHWHGCSSSSMLLHPPPSVNYFLPPSHAQDSLDGVDFAYAIIGYLIWQVLYFVKTEVVDRAALDARPDLLTSLRWLTTDRKNGFSLLVLGLCRYGGIMGPTEAYDPRTTKTKAIFVAAQLVYTVVTFAPTPLLFTSHFLHCMYIQLIFVAAVHNGASYYFEVFAKLY 344          
BLAST of mRNA_Ecto-sp9_F_contig1048.452.1 vs.
Match: Glycerophosphocholine (acyltransferase 1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B0L6_9STRA)

HSP 1 Score: 179 bits (455), Expect = 3.640e-45
Identity = 96/226 (42.48%), Postives = 128/226 (56.64%), Query Frame = 1
Query:   25 FVMPHSCRLLKSIFIFVMGSLLWAVPLWRNSLVFHDVDKMTSCFIHLFPSWLALTLRWYPLDPMRGGTAGAEPECQDSIDMGDVG--TAMAMYLAWQVLYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNPMHKVVLALMRKIGMFKEDETFDPTTFKTKMIFMGSQLVFTVLVSVPTPFLYNSKWASISLAFFVFLCALWNSSNYYIEVFSRRYWQSMEAESAA 696
            F  P SC L    F + +G L  +V +WRNSLVFHDVDK+T+ +IH+ PSWL    RW     +  GT     E       G  G  TA   YL WQVL++ KTE+ D   L++D + QTSLRW+    S  +H++VL LMRK  +    E FDP T KTK+IFM SQ VFT +  +PT  ++     +++    VF   ++N   YYIEVFSRRY+   E  + A
Sbjct:  200 FFFPRSCTLFHMNFAYAVGPLCCSVIIWRNSLVFHDVDKVTTLYIHILPSWLVYANRW-----LIAGTGSRFEELAQCEAFGTAGLFTAFLGYLFWQVLFYVKTEVVDAAFLNSDKDHQTSLRWMALDDSKAVHRLVLWLMRKYQLMGPKERFDPRTHKTKIIFMASQFVFTAITILPTFLVHKYFLVNLAYVIAVFTAGVYNGGEYYIEVFSRRYYTQFEKTATA 420          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1048.452.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Glycerophosphocholine1.120e-19991.57acyltransferase 1 n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
Glycerophosphocholine2.150e-6948.89acyltransferase 1 n=1 Tax=Tribonema minus TaxID=30... [more]
Glycerophosphocholine1.480e-5545.05acyltransferase 1 n=2 Tax=Monodopsidaceae TaxID=42... [more]
Glycerophosphocholine1.300e-5143.59acyltransferase 1 n=1 Tax=Thecamonas trahens ATCC ... [more]
Glycerophosphocholine3.230e-4842.34acyltransferase 1 n=1 Tax=Aphanomyces euteiches Ta... [more]
Glycerophosphocholine6.060e-4745.02acyltransferase 1 n=1 Tax=Aphanomyces stellatus Ta... [more]
Transmembrane8.360e-4744.88protein n=1 Tax=Terrestrivirus sp. TaxID=2487775 R... [more]
Glycerophosphocholine1.700e-4644.19acyltransferase 1 n=1 Tax=Aphanomyces astaci TaxID... [more]
Glycerophosphocholine3.360e-4543.72acyltransferase 1 n=10 Tax=Aphanomyces astaci TaxI... [more]
Glycerophosphocholine3.640e-4542.48acyltransferase 1 n=1 Tax=Dictyocha speculum TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1048contigEcto-sp9_F_contig1048:160..3860 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score575.5
Seed ortholog evalue1.7e-161
Seed eggNOG ortholog2880.D7FQ84
KEGG koko:K07466
KEGG Pathwayko03030,ko03420,ko03430,ko03440,ko03460,map03030,map03420,map03430,map03440,map03460
KEGG ModuleM00288
EggNOG free text desc.lysophospholipid acyltransferase activity
EggNOG OGsKOG2895@1,KOG2895@2759
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03000,ko03032,ko03400
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionProtein of unknown function DUF2838
Ec32 orthologEc-01_007080.1
Exons4
Model size2118
Cds size1023
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1048.452.1prot_Ecto-sp9_F_contig1048.452.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1048 172..2777 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928258.4905217-UTR-Ecto-sp9_F_contig1048:159..1711622928258.4905217-UTR-Ecto-sp9_F_contig1048:159..171Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1048 160..171 +
1692277812.2010846-UTR-Ecto-sp9_F_contig1048:159..1711692277812.2010846-UTR-Ecto-sp9_F_contig1048:159..171Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1048 160..171 +
1622928258.5901833-UTR-Ecto-sp9_F_contig1048:2777..38601622928258.5901833-UTR-Ecto-sp9_F_contig1048:2777..3860Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1048 2778..3860 +
1692277812.253111-UTR-Ecto-sp9_F_contig1048:2777..38601692277812.253111-UTR-Ecto-sp9_F_contig1048:2777..3860Ectocarpus species9 EcSCA_722f femaleUTREcto-sp9_F_contig1048 2778..3860 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928258.509758-CDS-Ecto-sp9_F_contig1048:171..3001622928258.509758-CDS-Ecto-sp9_F_contig1048:171..300Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1048 172..300 +
1692277812.2158663-CDS-Ecto-sp9_F_contig1048:171..3001692277812.2158663-CDS-Ecto-sp9_F_contig1048:171..300Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1048 172..300 +
1622928258.5332916-CDS-Ecto-sp9_F_contig1048:951..11551622928258.5332916-CDS-Ecto-sp9_F_contig1048:951..1155Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1048 952..1155 +
1692277812.2252126-CDS-Ecto-sp9_F_contig1048:951..11551692277812.2252126-CDS-Ecto-sp9_F_contig1048:951..1155Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1048 952..1155 +
1622928258.5502934-CDS-Ecto-sp9_F_contig1048:1591..18751622928258.5502934-CDS-Ecto-sp9_F_contig1048:1591..1875Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1048 1592..1875 +
1692277812.234955-CDS-Ecto-sp9_F_contig1048:1591..18751692277812.234955-CDS-Ecto-sp9_F_contig1048:1591..1875Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1048 1592..1875 +
1622928258.5732706-CDS-Ecto-sp9_F_contig1048:2371..27771622928258.5732706-CDS-Ecto-sp9_F_contig1048:2371..2777Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1048 2372..2777 +
1692277812.2442536-CDS-Ecto-sp9_F_contig1048:2371..27771692277812.2442536-CDS-Ecto-sp9_F_contig1048:2371..2777Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1048 2372..2777 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1048.452.1

>prot_Ecto-sp9_F_contig1048.452.1 ID=prot_Ecto-sp9_F_contig1048.452.1|Name=mRNA_Ecto-sp9_F_contig1048.452.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=341bp
MVAIFVMPHSCRLLKSIFIFVMGSLLWAVPLWRNSLVFHDVDKMTSCFIH
LFPSWLALTLRWYPLDPMRGGTAGAEPECQDSIDMGDVGTAMAMYLAWQV
LYFFKTEIADKPKLDADPEIQTSLRWLTTSPSNPMHKVVLALMRKIGMFK
EDETFDPTTFKTKMIFMGSQLVFTVLVSVPTPFLYNSKWASISLAFFVFL
CALWNSSNYYIEVFSRRYWQSMEAESAAKAEALVVKATRQRERERLRSGE
DGIAAGGQMLSASSGGSGEDLADDDYEDGEDWEEEADAAPAADEDKEEEE
EEEAEAVGVGVGVGDMDGLLGGEVGAAADENPGQEKSKDV*
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mRNA from alignment at Ecto-sp9_F_contig1048:160..3860+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1048.452.1 ID=mRNA_Ecto-sp9_F_contig1048.452.1|Name=mRNA_Ecto-sp9_F_contig1048.452.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3701bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1048:160..3860+ (Ectocarpus species9 EcSCA_722f female)
CAGTTCTGGTGTATGGTAGCCATCTTCGTGATGCCGCACAGCTGCCGCCT TCTCAAGTCCATCTTCATATTCGTGATGGGGTCTCTCCTGTGGGCGGTGC CGCTGTGGAGGAACAGCCTGGTTTTCCATGACGTGGACAAGGTGCGGCGC GTTTTTTTTCTCCTTGGTGTTGATCTCTACACGCCACCAAGCCGCCCTCC TACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTGTCTTCGTGCCACCACT GCGACATGTTTTTTTTAAGTTGGCCCTTTCGCAACGTCCTATTCGTTACC GTCGCTCGCAGGTTTTGCCTGCCGCCGTACGATATTTCCGCCTTGCAGCA CGTACATGTAGCGCAAGACATCAAAAAGGAAAACGTTGTTCTATTTAGCA AGTCTGAATATCTTTTTGAAACCCTCTCGTTCACGAAACGAAGCCGCGGT CTCCTCTTGAACTGGTCCGCGTATCTGATGGACGTTGTGGAATTGTAGCA GTCACTCACCCATCAAGCGGCTCTTTGCGAAACGACAAGCACGACCACTG TTCTCGGACATGGATTTGGTCGAAGAATGCCTTTACCCCGGGCGTGCATA CACGTAGCTGCGAGGGACCCCGTGTTCCTGACGAAGTCGGACTGCTTGAT TGAGTCTGCCTCTCCACCTGTCCTTTGTTTACGGAATGCTCTGAGTCTAC ATCTCCATCTGTCTTTATTTGGCGGGCTGGATTTCGATGCGTCTTGCTTG CTGTCTTCCCTCTCCAATTCCTCCCTCGGTGTGACGATGCAGATGACGTC GTGCTTCATCCACCTGTTCCCGAGCTGGCTCGCTTTGACCCTGCGGTGGT ATCCCCTTGACCCCATGCGTGGGGGCACCGCCGGCGCTGAGCCAGAGTGC CAGGATAGTATCGACATGGGAGACGTGGGGACGGCCATGGCCATGTACCT GGCGTGGCAAGTGCTGTACTTTTTCAAGACCGAGATCGCGGATAAGGTGT GTACCCTGCGTTGATGAGACAAGACTCCTCGTAGATATATATATTTTTGT TGCGAGAATTTTTCGGACGCACCCCTCCTTATGTGTGTCGGTAGACCGTC GTGAGTAGTGCCGCCGCATTGCCTTACGCCACTACATGCACAGCGATGCT GCTATGTGCCTGCTTGCAGCCCCTCCAAACGGCGCTACATGTTGTCGCGA AAACCAGTTCTCGCAGGCTTGTTGAGTTGTCCGATCTCGGGATTAATGCC CTCCCCCCGCCGCGTCATCCCGCCATATCCGTCCATCGAAAGCTGTTTAG CGTGGTCACCCATACCCTCCTCCATCCCTTTCCCTCTGTGGCTCTTCCTC TCTCATTGCGCACGACCCCTTTCTGGTATCCTCCGTCAACTTACGTGTGC TGCTGCCCATATCGCGCTATGTACTTATACAGCCCAAGCTTGACGCGGAC CCCGAGATACAGACGAGCTTGCGGTGGCTCACCACGAGCCCCTCCAACCC GATGCACAAGGTCGTCCTGGCCCTGATGCGGAAGATCGGCATGTTCAAGG AGGACGAGACCTTCGACCCGACGACCTTCAAGACGAAGATGATCTTCATG GGCTCGCAGCTGGTCTTCACGGTGCTGGTCTCCGTGCCGACGCCGTTCCT CTACAACTCTAAGTGGGCGTCCATTTCGCTGGCGTTCTTCGTTTTCCTCT GCGCGTTGTGGAACAGGTGTGTGCTGTGTGCGTGTCTTTTTTTTCTTTGC TTTTTACGAGCTCTCGGTGTTGGCAACCACAAGTCGTGACCGAGTACACG TGTTGCCGGCGCATCCGTGATTTTTGCGGTGGGTTTGGGTTGTATACTCA TGGATGGACGCGAAAGTGGGGCAGGGGAGGAAACATTTGTACAAGTCAAA GGAAGTCTGAGGTTAGCAACGTATGTGGAGCCTTTCCCGGCGTTCTTACA ACACTTGATGGTGATTTCCACCGCCGCCAACGCCCAGGAATCCAAAAGGA ACTGCCACTTTTGCCGAAACTTTCGCTAGCCTCGCCCTGCTCCTCTCGCT GATACACACCACTCGTCTCCCCGATACACACCACTCGTCTCGCTGATACA CACCACTCGTCCCGCTGATACGCACCACTCGTCTCCCTGACTGAACCAAC AAAATCCGCCGCCCTCTCCCCCGTGTGTCCCGCGCCATCATGGCACCGCT CGCGACCCAAAGCTCCAACTACTACATCGAGGTCTTCTCTAGGAGGTACT GGCAGTCCATGGAGGCGGAGTCGGCGGCGAAGGCCGAGGCCCTGGTCGTG AAGGCCACCAGGCAGAGGGAGCGCGAGCGCCTGCGCAGCGGCGAGGACGG CATCGCGGCGGGAGGGCAGATGCTGTCGGCCTCCAGCGGAGGCAGCGGGG AGGACCTGGCCGACGACGACTACGAAGACGGCGAAGACTGGGAAGAGGAA GCCGATGCTGCGCCAGCCGCGGATGAGGATAAGGAGGAGGAGGAGGAGGA GGAGGCGGAGGCGGTGGGGGTGGGGGTGGGGGTGGGGGATATGGACGGGT TGTTGGGGGGTGAGGTGGGGGCGGCTGCCGACGAGAACCCTGGGCAAGAG AAGTCGAAGGACGTGTAGCGAGAAGGAAGAGGAGGGTAAAACTATCAATC ACCACGGGGCCTTGGGGAAGCTTCGAGTGACACAAATATTTTGCGTGTGT AACCCCGATTAGAACCTGGTTTTTGTTTGTCTTGTGTGAAACCTTCCAAG CCTTTGTCTGGGTTGCGGTTGTTCTGCGGAGTTTTTGCGGAGCTGAAGAT TCGATGAAATCGAAGTCGTTTTCGGCTGCATGAACCGGGTGCTGTGCCGT GTCTTGTAGATGCCGTGGGGCTACTGAGAAGGTCTTACTACCGTATGCAA CCCGCGTGTTGAGCGCCACGTGGGAGTCCACCACGGTATTTTAGATTATT TTGCAAGCTGTGGCGGCAAGTCTGGTTTCATGTTGAATGCGGGTTTCATA GTGTACAGGGGAATACGAGTTTTTGTGTGCCAGTAGAGAATGGCCACATG TTAGGCCGCGTGACGCGGTCGTTGGAGTTGGCCTGCCACTCTGTAAATAT AGCGCAGGACCCTCAAATGCCGTCAGTCGGTGTTTTCTACGTACACACGC GCGGGAGATGCCTGCGCTTGTGTCAAGGAGCTTCGCTCTTGGCCTCCTCA ACAGCGGTGCTGGTTTTGTGTTGACAGGGTATTTTGGTCGAAAATGCTTT TGGTCGACCAATACTGAAGCATCCAAGGTTTTTACTTGTTTCCAGCTCTT TCGGCTGCGGGACGTATCCTACGTAGCGGCAATCGCGCCACAAATAGAAA ATCGCGCCTGATTACTTTTATCTCAGTATGTCGGGTACGTAAAACTCATG TGCACTGCTGTACTCAATGAAGCACGGACTATCCTCTTGTACCATCGACT GCCTATAACGATCTTTGACCCGTCTGGGCACAGCATGAGGTTGATTAACG AGTGCACGTGGATTTCCGAAGTTGTATTGAGCGGCGAAGGTAGTGAGCCG AGTCGACCTGTGTGCAACTCTTTCGATGTCATCGACCAATTCCAGCTGGT CCAACATCATGAGCAGCGGCCGTGAGTGGATCCAGTCTCGTTGGCAGGGT TCTTGTAACCTTTTCGTTCGCGATACGGCAATCACAACAACCTTAACAGA T
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1048:160..3860+

>mRNA_Ecto-sp9_F_contig1048.452.1 ID=mRNA_Ecto-sp9_F_contig1048.452.1|Name=mRNA_Ecto-sp9_F_contig1048.452.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2046bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1048:160..3860+ (Ectocarpus species9 EcSCA_722f female)
ATGGTAGCCATCTTCGTGATGCCGCACAGCTGCCGCCTTCTCAAGTCCAT
CTTCATATTCGTGATGGGGTCTCTCCTGTGGGCGGTGCCGCTGTGGAGGA
ACAGCCTGGTTTTCCATGACGTGGACAAGATGGTAGCCATCTTCGTGATG
CCGCACAGCTGCCGCCTTCTCAAGTCCATCTTCATATTCGTGATGGGGTC
TCTCCTGTGGGCGGTGCCGCTGTGGAGGAACAGCCTGGTTTTCCATGACG
TGGACAAGATGACGTCGTGCTTCATCCACCTGTTCCCGAGCTGGCTCGCT
TTGACCCTGCGGTGGTATCCCCTTGACCCCATGCGTGGGGGCACCGCCGG
CGCTGAGCCAGAGTGCCAGGATAGTATCGACATGGGAGACGTGGGGACGG
CCATGGCCATGTACCTGGCGTGGCAAGTGCTGTACTTTTTCAAGACCGAG
ATCGCGGATAAGATGACGTCGTGCTTCATCCACCTGTTCCCGAGCTGGCT
CGCTTTGACCCTGCGGTGGTATCCCCTTGACCCCATGCGTGGGGGCACCG
CCGGCGCTGAGCCAGAGTGCCAGGATAGTATCGACATGGGAGACGTGGGG
ACGGCCATGGCCATGTACCTGGCGTGGCAAGTGCTGTACTTTTTCAAGAC
CGAGATCGCGGATAAGCCCAAGCTTGACGCGGACCCCGAGATACAGACGA
GCTTGCGGTGGCTCACCACGAGCCCCTCCAACCCGATGCACAAGGTCGTC
CTGGCCCTGATGCGGAAGATCGGCATGTTCAAGGAGGACGAGACCTTCGA
CCCGACGACCTTCAAGACGAAGATGATCTTCATGGGCTCGCAGCTGGTCT
TCACGGTGCTGGTCTCCGTGCCGACGCCGTTCCTCTACAACTCTAAGTGG
GCGTCCATTTCGCTGGCGTTCTTCGTTTTCCTCTGCGCGTTGTGGAACAG
CCCAAGCTTGACGCGGACCCCGAGATACAGACGAGCTTGCGGTGGCTCAC
CACGAGCCCCTCCAACCCGATGCACAAGGTCGTCCTGGCCCTGATGCGGA
AGATCGGCATGTTCAAGGAGGACGAGACCTTCGACCCGACGACCTTCAAG
ACGAAGATGATCTTCATGGGCTCGCAGCTGGTCTTCACGGTGCTGGTCTC
CGTGCCGACGCCGTTCCTCTACAACTCTAAGTGGGCGTCCATTTCGCTGG
CGTTCTTCGTTTTCCTCTGCGCGTTGTGGAACAGCTCCAACTACTACATC
GAGGTCTTCTCTAGGAGGTACTGGCAGTCCATGGAGGCGGAGTCGGCGGC
GAAGGCCGAGGCCCTGGTCGTGAAGGCCACCAGGCAGAGGGAGCGCGAGC
GCCTGCGCAGCGGCGAGGACGGCATCGCGGCGGGAGGGCAGATGCTGTCG
GCCTCCAGCGGAGGCAGCGGGGAGGACCTGGCCGACGACGACTACGAAGA
CGGCGAAGACTGGGAAGAGGAAGCCGATGCTGCGCCAGCCGCGGATGAGG
ATAAGGAGGAGGAGGAGGAGGAGGAGGCGGAGGCGGTGGGGGTGGGGGTG
GGGGTGGGGGATATGGACGGGTTGTTGGGGGGTGAGGTGGGGGCGGCTGC
CGACGAGAACCCTGGGCAAGAGAAGTCGAAGGACGTGTAGCTCCAACTAC
TACATCGAGGTCTTCTCTAGGAGGTACTGGCAGTCCATGGAGGCGGAGTC
GGCGGCGAAGGCCGAGGCCCTGGTCGTGAAGGCCACCAGGCAGAGGGAGC
GCGAGCGCCTGCGCAGCGGCGAGGACGGCATCGCGGCGGGAGGGCAGATG
CTGTCGGCCTCCAGCGGAGGCAGCGGGGAGGACCTGGCCGACGACGACTA
CGAAGACGGCGAAGACTGGGAAGAGGAAGCCGATGCTGCGCCAGCCGCGG
ATGAGGATAAGGAGGAGGAGGAGGAGGAGGAGGCGGAGGCGGTGGGGGTG
GGGGTGGGGGTGGGGGATATGGACGGGTTGTTGGGGGGTGAGGTGGGGGC
GGCTGCCGACGAGAACCCTGGGCAAGAGAAGTCGAAGGACGTGTAG
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