mRNA_Ecto-sp9_F_contig10324.329.1 (mRNA) Ectocarpus species9 EcSCA_722f female
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Overview
Homology
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Match: Ascorbate (peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G488_ECTSI) HSP 1 Score: 387 bits (993), Expect = 1.400e-134 Identity = 182/183 (99.45%), Postives = 182/183 (99.45%), Query Frame = 1
Query: 103 TFNKDSAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPDADTPQDHLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGAECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 651
TFNKDSAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPDADTPQ HLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGAECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN
Sbjct: 5 TFNKDSAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPDADTPQAHLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGAECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 187
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Match: Ascorbate (peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA8_ECTSI) HSP 1 Score: 337 bits (863), Expect = 3.700e-114 Identity = 164/229 (71.62%), Postives = 182/229 (79.48%), Query Frame = 1
Query: 37 MDLCAAHHCNPILVRLAWHDAGTFNKDSAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPDADTPQD-----------------------HLRNVFYRMGFGDEGIVALSGAHTLGRAKK-DRSGEGAECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 651
M +CAA NPIL+RLAWHDAGTFNKDSAEPWPRCGGANGSIRFEPEINH AN GLV L+LLQP+KDK+PEVGWADLIQLASA A+E+AGGPVIDM+YGRKDA TP+ CVDEG+LPAG+APFPDADTPQ+ HLRNVFYRMGFGDEGIVALSGAHTLGRA + + G+ + CTKFTA GVCPRG AP G PGGS+WT NW+KFDN
Sbjct: 1 MKMCAADDDNPILIRLAWHDAGTFNKDSAEPWPRCGGANGSIRFEPEINHEANLGLVFGLKLLQPLKDKYPEVGWADLIQLASATAVEEAGGPVIDMRYGRKDAATPKDCVDEGNLPAGDAPFPDADTPQNARHGFFRSLSWMLLLPVDTMETAHLRNVFYRMGFGDEGIVALSGAHTLGRAGQLNAEGDWSPCTKFTAAGVCPRGGDAPSKGNPGGSSWTRNWMKFDN 229
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Match: L-ascorbate (peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G168_ECTSI) HSP 1 Score: 333 bits (854), Expect = 1.200e-111 Identity = 162/217 (74.65%), Postives = 177/217 (81.57%), Query Frame = 1
Query: 1 QVAALQECKAEVMDLCAAHHCNPILVRLAWHDAGTFNKDSAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPDADTPQDHLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGAECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 651
+VAALQECK E+ + + +PI++RLAWHDAGT+NKDS E WPR GGANGSIRFEPEINHGANAGL AL+LL PIK K EVGWADL+QLASA A+E AGGP IDMKYGRKDA P+ CVDEGSLPAGN PFPDAD QDHLRNVFYRMGFGDEGIVALSGAHTLGRA KDRSGEGAE TKFT+ RG G G G+ GGS+WT WLKFDN
Sbjct: 92 KVAALQECKKELAGMIDKTNSHPIMIRLAWHDAGTYNKDSTEGWPRQGGANGSIRFEPEINHGANAGLTTALKLLTPIKKKFEEVGWADLMQLASATAVEVAGGPAIDMKYGRKDAVAPEDCVDEGSLPAGNKPFPDADNAQDHLRNVFYRMGFGDEGIVALSGAHTLGRAFKDRSGEGAESTKFTSGDHVARGDGKAGYGRKGGSSWTEKWLKFDN 308
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Match: Heme (peroxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE60_9STRA) HSP 1 Score: 285 bits (728), Expect = 3.580e-93 Identity = 139/215 (64.65%), Postives = 159/215 (73.95%), Query Frame = 1
Query: 13 LQECKAEVMDLCAAHHCNPILVRLAWHDAGTFNKD-SAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPDADT-PQDHLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGAECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 651
L E + ++ L + +C PI+VRLAWHD+GT+NKD WPRCGGANGSIRFEPEINHGANAGLVN L+LL+PI KHP VGWADL+QLASA A+E AGGP IDM+YGRK +P+ C DEG LPA APFPD PQ HLR VFYRMGF D GIVALSGAHTLGRA +RSG G + TK+T RG G PG G+ GG +WT WL FDN
Sbjct: 51 LLEAREALVKLIDSTNCAPIMVRLAWHDSGTYNKDIPVSEWPRCGGANGSIRFEPEINHGANAGLVNGLKLLEPIHKKHPNVGWADLLQLASATAVEVAGGPKIDMRYGRKTVESPEGCADEGYLPAAAAPFPDGSPEPQGHLRKVFYRMGFDDRGIVALSGAHTLGRAYPERSGFGKDSTKYTDGSTVIRGDGKPGIGRKGGQSWTYKWLSFDN 265
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Match: Hypothetical (protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GC78_HETAK) HSP 1 Score: 271 bits (694), Expect = 4.770e-88 Identity = 134/214 (62.62%), Postives = 160/214 (74.77%), Query Frame = 1
Query: 13 LQECKAEVMDLCAAHHCNPILVRLAWHDAGTFNKDSAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPDA-DTPQDHLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGAECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 651
L+ECK + D+ + NPI++RLAWHD+GT + S + WP+CGGA GSIRF+PEI HGANAGL AL+LL+PIK KHP VGWADL+Q+ASA ++E AGGP I MKYGR DA P+ C EG+LP APF D TPQ+H+R VF RMGF D+ IVALSGAHTLGRA KDRSG GAE TK+T+ RG G PG G+ GGS+WT WLKFDN
Sbjct: 49 LKECKESLKDMIDRTNSNPIMIRLAWHDSGTHDA-SIKEWPQCGGAIGSIRFDPEITHGANAGLTTALKLLEPIKAKHPSVGWADLMQMASAVSVELAGGPTIPMKYGRVDAQGPEDCSPEGNLPGAAAPFDDGCATPQEHIRKVFGRMGFNDQEIVALSGAHTLGRAFKDRSGFGAEKTKYTSGDHVARGDGKPGYGRQGGSSWTDKWLKFDN 261
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Match: PEROXIDASE_4 (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCD3_9STRA) HSP 1 Score: 265 bits (677), Expect = 2.600e-85 Identity = 134/218 (61.47%), Postives = 156/218 (71.56%), Query Frame = 1
Query: 22 CKAEVMDLCAAHHCNPILVRLAWHDAGTFNKDSAE-PWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGN------APFPDAD-TPQDHLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGAECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 651
C ++++ +C PI+VRLAWHDAGTFNK +A+ P+P GGANGSIRF+PE+ HGANAGL AL+LL+P+K +HP VGWADL+Q ASAA IE GGP I M+YGRKDA P+ C EG+LP N PFPD TP DHLR VF+RMG D+ IVALSGAHTLGRA KDRSG G E TKFT PRG GA G G+ GG WT WLKFDN
Sbjct: 56 CYVDLLETVNKANCAPIVVRLAWHDAGTFNKANADKPFPDRGGANGSIRFDPELAHGANAGLGIALKLLEPVKKRHPNVGWADLMQAASAAGIEATGGPRIPMRYGRKDAAGPEDCPKEGNLPGANIPGQQTGPFPDGTPTPADHLRKVFHRMGLSDQDIVALSGAHTLGRAYKDRSGLGKESTKFTEGDAAPRGDGAKGYGRKGGQPWTEKWLKFDN 273
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2W5_9STRA) HSP 1 Score: 264 bits (674), Expect = 5.590e-85 Identity = 131/213 (61.50%), Postives = 151/213 (70.89%), Query Frame = 1
Query: 16 QECKAEVMDLCAAHHCNPILVRLAWHDAGTFNKDSAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPDA-DTPQDHLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGAECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 651
+ECKA + ++ + NPI++RLAWHD+GTF+K WP GGA GSIRF PEI HGANAGL A++LL PIK+K P V WADL+Q+ASAA +E AGGP I MKYGR D C EG+LP APF D +TPQ+HLR VFYRMGF D+ IVALSGAHTLGRA KDRSG GAE TK+T RG G G G GGSAWT WLKFDN
Sbjct: 51 KECKAALEEMIDKTNSNPIMIRLAWHDSGTFDKGVTGEWPAAGGAVGSIRFSPEIEHGANAGLTTAIKLLTPIKNKFPNVSWADLMQMASAAGVELAGGPKIPMKYGRVDVEDSSGCSPEGNLPGAAAPFDDGCNTPQEHLRKVFYRMGFNDQEIVALSGAHTLGRAWKDRSGFGAETTKYTDGSTVARGDGKEGIGAKGGSAWTEKWLKFDN 263
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Match: Hypothetical (protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1K4M8_9ALVE) HSP 1 Score: 261 bits (666), Expect = 3.260e-83 Identity = 134/215 (62.33%), Postives = 159/215 (73.95%), Query Frame = 1
Query: 16 QECKAEVMDLCAAHHCNPILVRLAWHDAGTFNKDSAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPD-ADTPQDHLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGA--ECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 651
++C+AE+ L +C+PI+VRLAWHDAGT++ +A GGANGSIRFEPEINHGANAGL L+LLQ IKDK +V WADLIQ+ASA AIE AGGP I MKYGR DA + + C EG+LPAG AP+P A + +HLR++FYRMG GD+ IVALSGAHT+GRA+ DRSG GA ECTKFT G PRG G PG G GG +WT WL FDN
Sbjct: 97 RDCRAELAKLINETNCHPIMVRLAWHDAGTYDCKTA-----VGGANGSIRFEPEINHGANAGLKKGLELLQLIKDKFLDVSWADLIQMASATAIELAGGPKIPMKYGRIDAVSGRDCTPEGTLPAGGAPWPGKAKSAPEHLRDIFYRMGLGDKEIVALSGAHTIGRARTDRSGFGAGDECTKFTKGGAKPRGDGKPGMGHAGGQSWTEKWLAFDN 306
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Match: Heme (peroxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUS3_9STRA) HSP 1 Score: 255 bits (652), Expect = 4.680e-82 Identity = 126/211 (59.72%), Postives = 155/211 (73.46%), Query Frame = 1
Query: 25 KAEVMDLCAAHHCNPILVRLAWHDAGTFNKD-SAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPD-ADTPQDHLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGAECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 651
+ E+ L + P+LVRLAWHD+GT++K E WP+CGGANGSIRF PEINH AN+GLV+ L+LL+P+KDKHP + WADLIQ+ASA AIEQAGGP IDM+YGRKD ++ C EG+LPAG P+P+ A + +HLR VF RMGF D+ IVALSGAHTLGRA +RSG G + TK+T R G PG G+ GG +WT WLKFDN
Sbjct: 14 REEIKTLLDKTNSAPLLVRLAWHDSGTYDKSIRIEEWPKCGGANGSIRFVPEINHKANSGLVHGLELLKPLKDKHPSISWADLIQMASATAIEQAGGPKIDMRYGRKDVSSAAECAPEGNLPAGAKPWPNNAASAAEHLRAVFERMGFNDQEIVALSGAHTLGRANPERSGLGKDSTKYTDGTSIVRPDGKPGSGRIGGQSWTKQWLKFDN 224
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Match: Uncharacterized (protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FGS3_VITBC) HSP 1 Score: 270 bits (691), Expect = 8.080e-82 Identity = 136/217 (62.67%), Postives = 159/217 (73.27%), Query Frame = 1
Query: 13 LQECKAEVMDLCAAHHCNPILVRLAWHDAGTFNKD-SAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPD-ADTPQDHLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGA--ECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 651
L++CK + L +C+PI+VRL WHDAGTF K E WPRCGGANGSIRFEPEI HG NAGL AL+LLQPIK + +V WADL+Q+ASA AIE AGGP I MKYGR DA + + C EG+LPAG AP+P A + +HLR++FYRMG GD+ IVALSGAHT+GRA+ DRSG GA ECTKFT G PRG G PG G GG +WT WL FDN
Sbjct: 621 LRQCKEALSKLIDEKNCHPIMVRLGWHDAGTFTKAIGIEHWPRCGGANGSIRFEPEIAHGCNAGLAKALELLQPIKKEFFDVSWADLMQMASATAIELAGGPKIPMKYGRIDAVSGRDCTPEGTLPAGGAPWPGKAKSAPEHLRDIFYRMGLGDKEIVALSGAHTIGRARTDRSGFGAGDECTKFTKGGAKPRGDGKPGMGHAGGQSWTEKWLAFDN 837 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp9_F_contig10324.329.1 >prot_Ecto-sp9_F_contig10324.329.1 ID=prot_Ecto-sp9_F_contig10324.329.1|Name=mRNA_Ecto-sp9_F_contig10324.329.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=217bp QVAALQECKAEVMDLCAAHHCNPILVRLAWHDAGTFNKDSAEPWPRCGGAback to top mRNA from alignment at Ecto-sp9_F_contig10324:864..4424+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp9_F_contig10324.329.1 ID=mRNA_Ecto-sp9_F_contig10324.329.1|Name=mRNA_Ecto-sp9_F_contig10324.329.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3561bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10324:864..4424+ (Ectocarpus species9 EcSCA_722f female)back to top Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10324:864..4424+ >mRNA_Ecto-sp9_F_contig10324.329.1 ID=mRNA_Ecto-sp9_F_contig10324.329.1|Name=mRNA_Ecto-sp9_F_contig10324.329.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1302bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10324:864..4424+ (Ectocarpus species9 EcSCA_722f female)back to top |