mRNA_Ecto-sp9_F_contig10324.329.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig10324.329.1
Unique NamemRNA_Ecto-sp9_F_contig10324.329.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Match: Ascorbate (peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G488_ECTSI)

HSP 1 Score: 387 bits (993), Expect = 1.400e-134
Identity = 182/183 (99.45%), Postives = 182/183 (99.45%), Query Frame = 1
Query:  103 TFNKDSAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPDADTPQDHLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGAECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 651
            TFNKDSAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPDADTPQ HLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGAECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN
Sbjct:    5 TFNKDSAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPDADTPQAHLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGAECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 187          
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Match: Ascorbate (peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA8_ECTSI)

HSP 1 Score: 337 bits (863), Expect = 3.700e-114
Identity = 164/229 (71.62%), Postives = 182/229 (79.48%), Query Frame = 1
Query:   37 MDLCAAHHCNPILVRLAWHDAGTFNKDSAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPDADTPQD-----------------------HLRNVFYRMGFGDEGIVALSGAHTLGRAKK-DRSGEGAECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 651
            M +CAA   NPIL+RLAWHDAGTFNKDSAEPWPRCGGANGSIRFEPEINH AN GLV  L+LLQP+KDK+PEVGWADLIQLASA A+E+AGGPVIDM+YGRKDA TP+ CVDEG+LPAG+APFPDADTPQ+                       HLRNVFYRMGFGDEGIVALSGAHTLGRA + +  G+ + CTKFTA GVCPRG  AP  G PGGS+WT NW+KFDN
Sbjct:    1 MKMCAADDDNPILIRLAWHDAGTFNKDSAEPWPRCGGANGSIRFEPEINHEANLGLVFGLKLLQPLKDKYPEVGWADLIQLASATAVEEAGGPVIDMRYGRKDAATPKDCVDEGNLPAGDAPFPDADTPQNARHGFFRSLSWMLLLPVDTMETAHLRNVFYRMGFGDEGIVALSGAHTLGRAGQLNAEGDWSPCTKFTAAGVCPRGGDAPSKGNPGGSSWTRNWMKFDN 229          
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Match: L-ascorbate (peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G168_ECTSI)

HSP 1 Score: 333 bits (854), Expect = 1.200e-111
Identity = 162/217 (74.65%), Postives = 177/217 (81.57%), Query Frame = 1
Query:    1 QVAALQECKAEVMDLCAAHHCNPILVRLAWHDAGTFNKDSAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPDADTPQDHLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGAECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 651
            +VAALQECK E+  +    + +PI++RLAWHDAGT+NKDS E WPR GGANGSIRFEPEINHGANAGL  AL+LL PIK K  EVGWADL+QLASA A+E AGGP IDMKYGRKDA  P+ CVDEGSLPAGN PFPDAD  QDHLRNVFYRMGFGDEGIVALSGAHTLGRA KDRSGEGAE TKFT+     RG G  G G+ GGS+WT  WLKFDN
Sbjct:   92 KVAALQECKKELAGMIDKTNSHPIMIRLAWHDAGTYNKDSTEGWPRQGGANGSIRFEPEINHGANAGLTTALKLLTPIKKKFEEVGWADLMQLASATAVEVAGGPAIDMKYGRKDAVAPEDCVDEGSLPAGNKPFPDADNAQDHLRNVFYRMGFGDEGIVALSGAHTLGRAFKDRSGEGAESTKFTSGDHVARGDGKAGYGRKGGSSWTEKWLKFDN 308          
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Match: Heme (peroxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE60_9STRA)

HSP 1 Score: 285 bits (728), Expect = 3.580e-93
Identity = 139/215 (64.65%), Postives = 159/215 (73.95%), Query Frame = 1
Query:   13 LQECKAEVMDLCAAHHCNPILVRLAWHDAGTFNKD-SAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPDADT-PQDHLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGAECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 651
            L E +  ++ L  + +C PI+VRLAWHD+GT+NKD     WPRCGGANGSIRFEPEINHGANAGLVN L+LL+PI  KHP VGWADL+QLASA A+E AGGP IDM+YGRK   +P+ C DEG LPA  APFPD    PQ HLR VFYRMGF D GIVALSGAHTLGRA  +RSG G + TK+T      RG G PG G+ GG +WT  WL FDN
Sbjct:   51 LLEAREALVKLIDSTNCAPIMVRLAWHDSGTYNKDIPVSEWPRCGGANGSIRFEPEINHGANAGLVNGLKLLEPIHKKHPNVGWADLLQLASATAVEVAGGPKIDMRYGRKTVESPEGCADEGYLPAAAAPFPDGSPEPQGHLRKVFYRMGFDDRGIVALSGAHTLGRAYPERSGFGKDSTKYTDGSTVIRGDGKPGIGRKGGQSWTYKWLSFDN 265          
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Match: Hypothetical (protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GC78_HETAK)

HSP 1 Score: 271 bits (694), Expect = 4.770e-88
Identity = 134/214 (62.62%), Postives = 160/214 (74.77%), Query Frame = 1
Query:   13 LQECKAEVMDLCAAHHCNPILVRLAWHDAGTFNKDSAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPDA-DTPQDHLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGAECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 651
            L+ECK  + D+    + NPI++RLAWHD+GT +  S + WP+CGGA GSIRF+PEI HGANAGL  AL+LL+PIK KHP VGWADL+Q+ASA ++E AGGP I MKYGR DA  P+ C  EG+LP   APF D   TPQ+H+R VF RMGF D+ IVALSGAHTLGRA KDRSG GAE TK+T+     RG G PG G+ GGS+WT  WLKFDN
Sbjct:   49 LKECKESLKDMIDRTNSNPIMIRLAWHDSGTHDA-SIKEWPQCGGAIGSIRFDPEITHGANAGLTTALKLLEPIKAKHPSVGWADLMQMASAVSVELAGGPTIPMKYGRVDAQGPEDCSPEGNLPGAAAPFDDGCATPQEHIRKVFGRMGFNDQEIVALSGAHTLGRAFKDRSGFGAEKTKYTSGDHVARGDGKPGYGRQGGSSWTDKWLKFDN 261          
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Match: PEROXIDASE_4 (domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DCD3_9STRA)

HSP 1 Score: 265 bits (677), Expect = 2.600e-85
Identity = 134/218 (61.47%), Postives = 156/218 (71.56%), Query Frame = 1
Query:   22 CKAEVMDLCAAHHCNPILVRLAWHDAGTFNKDSAE-PWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGN------APFPDAD-TPQDHLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGAECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 651
            C  ++++     +C PI+VRLAWHDAGTFNK +A+ P+P  GGANGSIRF+PE+ HGANAGL  AL+LL+P+K +HP VGWADL+Q ASAA IE  GGP I M+YGRKDA  P+ C  EG+LP  N       PFPD   TP DHLR VF+RMG  D+ IVALSGAHTLGRA KDRSG G E TKFT     PRG GA G G+ GG  WT  WLKFDN
Sbjct:   56 CYVDLLETVNKANCAPIVVRLAWHDAGTFNKANADKPFPDRGGANGSIRFDPELAHGANAGLGIALKLLEPVKKRHPNVGWADLMQAASAAGIEATGGPRIPMRYGRKDAAGPEDCPKEGNLPGANIPGQQTGPFPDGTPTPADHLRKVFHRMGLSDQDIVALSGAHTLGRAYKDRSGLGKESTKFTEGDAAPRGDGAKGYGRKGGQPWTEKWLKFDN 273          
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2W5_9STRA)

HSP 1 Score: 264 bits (674), Expect = 5.590e-85
Identity = 131/213 (61.50%), Postives = 151/213 (70.89%), Query Frame = 1
Query:   16 QECKAEVMDLCAAHHCNPILVRLAWHDAGTFNKDSAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPDA-DTPQDHLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGAECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 651
            +ECKA + ++    + NPI++RLAWHD+GTF+K     WP  GGA GSIRF PEI HGANAGL  A++LL PIK+K P V WADL+Q+ASAA +E AGGP I MKYGR D      C  EG+LP   APF D  +TPQ+HLR VFYRMGF D+ IVALSGAHTLGRA KDRSG GAE TK+T      RG G  G G  GGSAWT  WLKFDN
Sbjct:   51 KECKAALEEMIDKTNSNPIMIRLAWHDSGTFDKGVTGEWPAAGGAVGSIRFSPEIEHGANAGLTTAIKLLTPIKNKFPNVSWADLMQMASAAGVELAGGPKIPMKYGRVDVEDSSGCSPEGNLPGAAAPFDDGCNTPQEHLRKVFYRMGFNDQEIVALSGAHTLGRAWKDRSGFGAETTKYTDGSTVARGDGKEGIGAKGGSAWTEKWLKFDN 263          
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Match: Hypothetical (protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1K4M8_9ALVE)

HSP 1 Score: 261 bits (666), Expect = 3.260e-83
Identity = 134/215 (62.33%), Postives = 159/215 (73.95%), Query Frame = 1
Query:   16 QECKAEVMDLCAAHHCNPILVRLAWHDAGTFNKDSAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPD-ADTPQDHLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGA--ECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 651
            ++C+AE+  L    +C+PI+VRLAWHDAGT++  +A      GGANGSIRFEPEINHGANAGL   L+LLQ IKDK  +V WADLIQ+ASA AIE AGGP I MKYGR DA + + C  EG+LPAG AP+P  A +  +HLR++FYRMG GD+ IVALSGAHT+GRA+ DRSG GA  ECTKFT  G  PRG G PG G  GG +WT  WL FDN
Sbjct:   97 RDCRAELAKLINETNCHPIMVRLAWHDAGTYDCKTA-----VGGANGSIRFEPEINHGANAGLKKGLELLQLIKDKFLDVSWADLIQMASATAIELAGGPKIPMKYGRIDAVSGRDCTPEGTLPAGGAPWPGKAKSAPEHLRDIFYRMGLGDKEIVALSGAHTIGRARTDRSGFGAGDECTKFTKGGAKPRGDGKPGMGHAGGQSWTEKWLAFDN 306          
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Match: Heme (peroxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUS3_9STRA)

HSP 1 Score: 255 bits (652), Expect = 4.680e-82
Identity = 126/211 (59.72%), Postives = 155/211 (73.46%), Query Frame = 1
Query:   25 KAEVMDLCAAHHCNPILVRLAWHDAGTFNKD-SAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPD-ADTPQDHLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGAECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 651
            + E+  L    +  P+LVRLAWHD+GT++K    E WP+CGGANGSIRF PEINH AN+GLV+ L+LL+P+KDKHP + WADLIQ+ASA AIEQAGGP IDM+YGRKD ++   C  EG+LPAG  P+P+ A +  +HLR VF RMGF D+ IVALSGAHTLGRA  +RSG G + TK+T      R  G PG G+ GG +WT  WLKFDN
Sbjct:   14 REEIKTLLDKTNSAPLLVRLAWHDSGTYDKSIRIEEWPKCGGANGSIRFVPEINHKANSGLVHGLELLKPLKDKHPSISWADLIQMASATAIEQAGGPKIDMRYGRKDVSSAAECAPEGNLPAGAKPWPNNAASAAEHLRAVFERMGFNDQEIVALSGAHTLGRANPERSGLGKDSTKYTDGTSIVRPDGKPGSGRIGGQSWTKQWLKFDN 224          
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Match: Uncharacterized (protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FGS3_VITBC)

HSP 1 Score: 270 bits (691), Expect = 8.080e-82
Identity = 136/217 (62.67%), Postives = 159/217 (73.27%), Query Frame = 1
Query:   13 LQECKAEVMDLCAAHHCNPILVRLAWHDAGTFNKD-SAEPWPRCGGANGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIEQAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPD-ADTPQDHLRNVFYRMGFGDEGIVALSGAHTLGRAKKDRSGEGA--ECTKFTAEGVCPRGAGAPGCGKPGGSAWTPNWLKFDN 651
            L++CK  +  L    +C+PI+VRL WHDAGTF K    E WPRCGGANGSIRFEPEI HG NAGL  AL+LLQPIK +  +V WADL+Q+ASA AIE AGGP I MKYGR DA + + C  EG+LPAG AP+P  A +  +HLR++FYRMG GD+ IVALSGAHT+GRA+ DRSG GA  ECTKFT  G  PRG G PG G  GG +WT  WL FDN
Sbjct:  621 LRQCKEALSKLIDEKNCHPIMVRLGWHDAGTFTKAIGIEHWPRCGGANGSIRFEPEIAHGCNAGLAKALELLQPIKKEFFDVSWADLMQMASATAIELAGGPKIPMKYGRIDAVSGRDCTPEGTLPAGGAPWPGKAKSAPEHLRDIFYRMGLGDKEIVALSGAHTIGRARTDRSGFGAGDECTKFTKGGAKPRGDGKPGMGHAGGQSWTEKWLAFDN 837          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig10324.329.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Ascorbate1.400e-13499.45peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G... [more]
Ascorbate3.700e-11471.62peroxidase n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
L-ascorbate1.200e-11174.65peroxidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G... [more]
Heme3.580e-9364.65peroxidase n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
Hypothetical4.770e-8862.62protein n=2 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
PEROXIDASE_42.600e-8561.47domain-containing protein n=2 Tax=Monodopsidaceae ... [more]
Hypothetical5.590e-8561.50protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Hypothetical3.260e-8362.33protein n=1 Tax=Vitrella brassicaformis TaxID=1169... [more]
Heme4.680e-8259.72peroxidase n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
Uncharacterized8.080e-8262.67protein n=2 Tax=Vitrella brassicaformis TaxID=1169... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig10324contigEcto-sp9_F_contig10324:864..4424 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score333.6
Seed ortholog evalue7e-89
Seed eggNOG ortholog2880.D7G168
Preferred nameAPX7
KEGG rclassRC00092
KEGG koko:K00434
KEGG ReactionR00644
KEGG Pathwayko00053,ko00480,map00053,map00480
GOsGO:0000302,GO:0003674,GO:0003824,GO:0004130,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009056,GO:0009266,GO:0009409,GO:0009507,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0009631,GO:0009636,GO:0009719,GO:0009725,GO:0009735,GO:0009987,GO:0010019,GO:0010033,GO:0016020,GO:0016209,GO:0016491,GO:0016684,GO:0016999,GO:0017001,GO:0017144,GO:0023052,GO:0031976,GO:0031984,GO:0033554,GO:0034357,GO:0034599,GO:0042221,GO:0042651,GO:0042737,GO:0042743,GO:0042744,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051186,GO:0051187,GO:0051716,GO:0055035,GO:0055114,GO:0065007,GO:0070887,GO:0071588,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1990748
EggNOG free text desc.Belongs to the peroxidase family
EggNOG OGs2QS7Q@2759,COG0685@1
Ec32 ortholog descriptionascorbate peroxidase
Ec32 orthologEc-02_001740.1
EC1.11.1.11
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons6
Model size651
Cds size651
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig10324.329.1prot_Ecto-sp9_F_contig10324.329.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig10324 864..4424 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928236.234652-CDS-Ecto-sp9_F_contig10324:863..9631622928236.234652-CDS-Ecto-sp9_F_contig10324:863..963Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10324 864..963 +
1692277805.0809534-CDS-Ecto-sp9_F_contig10324:863..9631692277805.0809534-CDS-Ecto-sp9_F_contig10324:863..963Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10324 864..963 +
1622928236.2493575-CDS-Ecto-sp9_F_contig10324:1222..12591622928236.2493575-CDS-Ecto-sp9_F_contig10324:1222..1259Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10324 1223..1259 +
1692277805.094318-CDS-Ecto-sp9_F_contig10324:1222..12591692277805.094318-CDS-Ecto-sp9_F_contig10324:1222..1259Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10324 1223..1259 +
1622928236.2682245-CDS-Ecto-sp9_F_contig10324:2006..21761622928236.2682245-CDS-Ecto-sp9_F_contig10324:2006..2176Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10324 2007..2176 +
1692277805.1034002-CDS-Ecto-sp9_F_contig10324:2006..21761692277805.1034002-CDS-Ecto-sp9_F_contig10324:2006..2176Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10324 2007..2176 +
1622928236.2996647-CDS-Ecto-sp9_F_contig10324:2839..29581622928236.2996647-CDS-Ecto-sp9_F_contig10324:2839..2958Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10324 2840..2958 +
1692277805.1127353-CDS-Ecto-sp9_F_contig10324:2839..29581692277805.1127353-CDS-Ecto-sp9_F_contig10324:2839..2958Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10324 2840..2958 +
1622928236.3290112-CDS-Ecto-sp9_F_contig10324:3858..39511622928236.3290112-CDS-Ecto-sp9_F_contig10324:3858..3951Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10324 3859..3951 +
1692277805.1232595-CDS-Ecto-sp9_F_contig10324:3858..39511692277805.1232595-CDS-Ecto-sp9_F_contig10324:3858..3951Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10324 3859..3951 +
1622928236.3397415-CDS-Ecto-sp9_F_contig10324:4292..44241622928236.3397415-CDS-Ecto-sp9_F_contig10324:4292..4424Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10324 4293..4424 +
1692277805.131393-CDS-Ecto-sp9_F_contig10324:4292..44241692277805.131393-CDS-Ecto-sp9_F_contig10324:4292..4424Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig10324 4293..4424 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig10324.329.1

>prot_Ecto-sp9_F_contig10324.329.1 ID=prot_Ecto-sp9_F_contig10324.329.1|Name=mRNA_Ecto-sp9_F_contig10324.329.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=217bp
QVAALQECKAEVMDLCAAHHCNPILVRLAWHDAGTFNKDSAEPWPRCGGA
NGSIRFEPEINHGANAGLVNALQLLQPIKDKHPEVGWADLIQLASAAAIE
QAGGPVIDMKYGRKDATTPQCCVDEGSLPAGNAPFPDADTPQDHLRNVFY
RMGFGDEGIVALSGAHTLGRAKKDRSGEGAECTKFTAEGVCPRGAGAPGC
GKPGGSAWTPNWLKFDN
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mRNA from alignment at Ecto-sp9_F_contig10324:864..4424+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig10324.329.1 ID=mRNA_Ecto-sp9_F_contig10324.329.1|Name=mRNA_Ecto-sp9_F_contig10324.329.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=3561bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10324:864..4424+ (Ectocarpus species9 EcSCA_722f female)
CAGGTAGCTGCTCTTCAGGAGTGCAAGGCCGAGGTAATGGACCTTTGCGC GGCTCACCACTGCAACCCCATCCTGGTCCGCCTTGCATGGCACGACGCTG GTAACACCATGTACCTAGTTTAGGATGCATGTCGACGTCCGTTGCGGTAG CCAACAACGGTTCCGGAAGAGTGCATGCGTAACCTTGACCCTCAGAAGGA GGACCCTTTTTGCGCACCTGAAATCACCGGTGTTGAGTGAGTTTCTTTGT CGCTTCAACTTGTCTTTATCGCTCCTGCTAACTCACGCATCCGACCGTTA CAAGAAACATGCCTAACTATGTAGTGGGACGTTTTTACCTCCCTCGACCC GCGTATCAGGCACTTTCAACAAGGACAGCGCGGAGCCGTGGCCGAGGTAC GAGCACAACGCGTGGGACATAATTTTTCAGACGACTCAAGAGTAGTGTCA CGAGATTATATGGACTGAAAATCGCGCAGGGTTCCTGTGTGTCTGTGTGC GTGATGTTCTGAGTTTTTTTGCTACTGCTGTAGCATCGACCTCGCTAACC GGCTGACTATTAAAAGACCTCAGTATGTGAGTTCATGTGTTTTGTGCGTT GGGTCCTCCTCGACCGCGAATGGCGCCAGACCGGTGAACGAAAGGCGGCA GCGTGAGCAAAAAAATATTTGCAAGCTCGCTTGTCTTAGTCTATGATTTG TATGGACGTGTGTAGCTTCGTGGGCATGCACCCGATGCGTGTGATGAGAT CGATAGCGGGATGAGGGGAGCGTGAAATTAAAAAACTGCCCCTTGGGCGG GCAGGTGCAAGGCGGTGTTCTTCGTCCTTACGTTTATTTCTCGCTTCCGA GGTCTGTGTGCTGACTCCTCGCTATTTGTTGTCCAATCTCTGGTCTATTT ACAGCCGTACGATCCATCGTTGTTCCATCCTCTGTCTTGCTTGCTGATTT CCAGCACTCGCCGCACCAGCGCTCAGACAGACACGCACGGACGTGCCAAT ATCGCGCACCCTCTTTCTCTTCCCGGGCCGGCGTCCTGTGTGATACAACA TCCGATCAGATCCACGCCCACCCTTAACCCTACAGTACATATACTGTACC CTCTGCCTTGCGTTCGGTGGCACCGGCCGGGGAACCAAAATAGGTGTGGC GGGGCAAACGGGTCCATCCGCTTCGAGCCGGAGATCAACCACGGTGCCAA CGCCGGCCTGGTGAACGCCCTCCAGCTGCTGCAGCCCATCAAAGACAAGC ACCCGGAGGTTGGGTGGGCGGACCTGATCCAGCTTGCCTCTGCCGCGGCC ATCGAGCAGGCTGGTGAGGTGTTTTTTTTTGTCAAGGGGGTGTGATGGTG GGGAGGCGGAAAGAGGCCCTAGGTTGATTCGTATTGCGCTAAGCCTTAAC CTAGCGGGGTTGTGTTTGGCGGTAATGAGCACTAACACGGTTGTCGTTGG CGGCAATGGGTGATGATGATGACAGCTTACAGAGTGACTCCCTGGTGCGT GCGCGCCATCATCAGAGACCAGAGGTGTAATGTGTGCGGTGATGGCGTGA TGCGATAGATGCGTTGTCGACAGTTTATGAGACAAATCACGATATGCATG GTGAACACGTTGGAGTGTTGGTACAAACGCTGCCGGGCAAAGATTGTGTG TCGGTCTGATCTGTAGCCAAGCGAGTTGCGGGTCAATTGCTTCGGTATGA CATGCGCAGGGCGACCGGGTAGGTCGCTATCAACAAGTGACACATGTATA CTCAACATCAACGGTGTTTGCATCTTCTTCTACGAAAATATGTTTCCTTT CCTGCAACTTGCTGAAACCGCTTTTATTTCCCGTACAAGCACCGTGGAAA TGTGGGCCCTGTCTGTGCATTACTTCTACAAGATATGGTGCGCTTTGGGT ACTTCTTGCCACGAAACCAACATGGCATGCACGTAAGTCTTTTTCTACAT GTACAACACAACACAAACCTACGCAGGTGGCCCCGTGATCGACATGAAGT ACGGCCGGAAGGACGCCACGACGCCGCAGTGCTGCGTGGACGAGGGTTCC CTCCCCGCGGGAAACGCGCCCTTCCCCGACGCCGACACGCCTCAGGTATA GATACAGAGTTCCGCAAACGTTTTTATTATGCAGGCTGATGTATAGCAAG TAAACTACGTCCTCAGGGCGAGAAATCATTCTGTGAGACCACGGGTTGGA GCCCTTCCCGGGTAGAACTGATGTAATAAGCGTTGAATAAAAGTGATGCA GTAACAAAATGTAGTAGCGTGCCGCTGAGACAAAAAGCAAAAGCGATGGG TGATGGGTGATGGGTGATAGTAACGTTGCAGTGAGTTGGCGTGTTGCTGT CCTCAACGCGTCGCCCTCAAAGCTTCCGGTTGAGCTGTCTGGCCGACGGG ACGATTCAAACCGTCTGAATCTGAATCTTCATGTTCTCTGTTGAAATGTT GTCTAGAACGTGTACCCCCCCCCTGCCCCCTCCAGGGTGCCCTCTCTGTT TTTCCCACAAGGCAGTTGCGAGGAAGCGGTCGCTTTTTTTGCGGGGATGG CCGTGGTGCACGAGGTACTTTAGGGAGGTGGCGGCGTGTGGAAAACGTAT TTTGTTGTACTCTGCTGAACCCATAGCGTTTTTAACATGGACGATTGAAT TTCTGCGGATGTGCATGGCCGATTTGGTTGTGCTGCTTGAGTAGAAAACA CATAAATTACCGCACACAATGAGAAGGCCTTTTAAGTGTCACAAACGGGA CAGGGGTAGGGCTGCGTCTCCAGACGGGCTTGTGGACAACGGTCCAGCCA CAAAGGCAACCAATAATGAATATCCCCCTCCTAAACTCTTAACAGCGCGT GTTTGTCTTCCTCTCCCTGTGCCTGGCATTGCTCTGTGAGCGTCTGCTAC TCTTGCTGTTATTTCCATCAAGGTTGGCTTGTTTCTGGGAGTGAGTTTCC CCTGCCCGCTTGTCGTCGTTTGACCTATTTTTTTCTTGTGCGCAGGACCA CCTCCGGAACGTGTTCTATCGCATGGGCTTCGGCGACGAGGGCATCGTGG CGCTGTCCGGCGCCCACACCCTCGGAAGGGCCAAAAAGGTAAGTATTGGT ACTCATGCATGCTGTTTTTTTTCAACGACTACATGATCGTACTCTACGTG CTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCAGCTGCATGTTTACTG CGTGCATGCCACTGGTTGCTCCGTGGGTTGGACCGCCGTTGTATATTATT GTGTTTTTTTGTGTGATGTCGCTGGGGGTTGACAGCCAGCAAGTACTAGA AGCGCCGCGGATCGTGGTAGTTACCAAGACGGCAGAGTGGATGTCTGAAT TATAATAATTCGAGACCCAGTACCAAACGCTCCCCCGCTATAAACCTCGC CTCCCCATCACTTTTTTCATATTTTCCAGGACCGCAGCGGTGAGGGAGCC GAGTGCACCAAGTTCACCGCGGAAGGCGTGTGCCCCAGAGGGGCGGGTGC CCCCGGCTGCGGAAAGCCCGGAGGGAGCGCCTGGACACCGAACTGGCTCA AGTTCGACAAC
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig10324:864..4424+

>mRNA_Ecto-sp9_F_contig10324.329.1 ID=mRNA_Ecto-sp9_F_contig10324.329.1|Name=mRNA_Ecto-sp9_F_contig10324.329.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1302bp|location=Sequence derived from alignment at Ecto-sp9_F_contig10324:864..4424+ (Ectocarpus species9 EcSCA_722f female)
CAGGTAGCTGCTCTTCAGGAGTGCAAGGCCGAGGTAATGGACCTTTGCGC
GGCTCACCACTGCAACCCCATCCTGGTCCGCCTTGCATGGCACGACGCTG
CAGGTAGCTGCTCTTCAGGAGTGCAAGGCCGAGGTAATGGACCTTTGCGC
GGCTCACCACTGCAACCCCATCCTGGTCCGCCTTGCATGGCACGACGCTG
GCACTTTCAACAAGGACAGCGCGGAGCCGTGGCCGAGGCACTTTCAACAA
GGACAGCGCGGAGCCGTGGCCGAGGTGTGGCGGGGCAAACGGGTCCATCC
GCTTCGAGCCGGAGATCAACCACGGTGCCAACGCCGGCCTGGTGAACGCC
CTCCAGCTGCTGCAGCCCATCAAAGACAAGCACCCGGAGGTTGGGTGGGC
GGACCTGATCCAGCTTGCCTCTGCCGCGGCCATCGAGCAGGCTGGTGTGG
CGGGGCAAACGGGTCCATCCGCTTCGAGCCGGAGATCAACCACGGTGCCA
ACGCCGGCCTGGTGAACGCCCTCCAGCTGCTGCAGCCCATCAAAGACAAG
CACCCGGAGGTTGGGTGGGCGGACCTGATCCAGCTTGCCTCTGCCGCGGC
CATCGAGCAGGCTGGTGGCCCCGTGATCGACATGAAGTACGGCCGGAAGG
ACGCCACGACGCCGCAGTGCTGCGTGGACGAGGGTTCCCTCCCCGCGGGA
AACGCGCCCTTCCCCGACGCCGACACGCCTCAGGTGGCCCCGTGATCGAC
ATGAAGTACGGCCGGAAGGACGCCACGACGCCGCAGTGCTGCGTGGACGA
GGGTTCCCTCCCCGCGGGAAACGCGCCCTTCCCCGACGCCGACACGCCTC
AGGACCACCTCCGGAACGTGTTCTATCGCATGGGCTTCGGCGACGAGGGC
ATCGTGGCGCTGTCCGGCGCCCACACCCTCGGAAGGGCCAAAAAGGACCA
CCTCCGGAACGTGTTCTATCGCATGGGCTTCGGCGACGAGGGCATCGTGG
CGCTGTCCGGCGCCCACACCCTCGGAAGGGCCAAAAAGGACCGCAGCGGT
GAGGGAGCCGAGTGCACCAAGTTCACCGCGGAAGGCGTGTGCCCCAGAGG
GGCGGGTGCCCCCGGCTGCGGAAAGCCCGGAGGGAGCGCCTGGACACCGA
ACTGGCTCAAGTTCGACAACGACCGCAGCGGTGAGGGAGCCGAGTGCACC
AAGTTCACCGCGGAAGGCGTGTGCCCCAGAGGGGCGGGTGCCCCCGGCTG
CGGAAAGCCCGGAGGGAGCGCCTGGACACCGAACTGGCTCAAGTTCGACA
AC
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