mRNA_Ecto-sp9_F_contig1030.309.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1030.309.1
Unique NamemRNA_Ecto-sp9_F_contig1030.309.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig1030.309.1 vs.
Match: EsV-1-1 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI)

HSP 1 Score: 587 bits (1514), Expect = 2.260e-208
Identity = 386/403 (95.78%), Postives = 394/403 (97.77%), Query Frame = 1
Query:    1 MELVELDEHGKDKYGISRGPIPIINAAGRGLSKIVRKLVEQGHDVSLTNDAGFTALHTAAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHAKANPLLTWSSESSGTSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAALYGQVDIMSMLMDAGVVDPVGLALLAAVGGGKEAAVGFLLRQQEERWQTCYVNIARDDDGLTALLWSFRGTNNKSCNPRITRRLVDAGADTTSAVQLRAERSRTCINVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLQAVAVHAVSWMWPSDAPLLARPANSPRTAKHSPTPLTTMLPVLRRRARRRALLWDTLFRWA 1209
            MELVELDEHGKDKYGISRGPIPIINAAGRGLSKIVRKLVEQGHDVSLTNDAGFTALHTAAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHAKANPLLTWSSESSG SFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAA+YGQVDIMSMLMDAGVVDPVGLALLAAVG GKEAAVGFLLRQQEERWQT YVNIARDDDGLTALLWSFRG  NK CNPRITRRLVDAGADTTSAVQLRA+RSRTC+NVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLL+ VAVHAVSW+WPSDAPLLARPANSPRTAKHSPT LTT+LPVLRRRA RRALLWDTLFR++
Sbjct:    1 MELVELDEHGKDKYGISRGPIPIINAAGRGLSKIVRKLVEQGHDVSLTNDAGFTALHTAAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHAKANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERWQTSYVNIARDDDGLTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHSPTQLTTVLPVLRRRAGRRALLWDTLFRYS 403          
BLAST of mRNA_Ecto-sp9_F_contig1030.309.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI1_9PHAE)

HSP 1 Score: 406 bits (1043), Expect = 8.570e-138
Identity = 217/267 (81.27%), Postives = 225/267 (84.27%), Query Frame = 1
Query:  412 LHAKANPLLTWSSESSGTSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGL-DALRVAALYGQVDIMSMLMDAGVVDPVGLALLAAVGGGKEAAVGFLLRQQEERWQTCYVNIARDDDGLTALLWSFRGTNNKSCNPRITRRLVDAGADTTSAVQLRAERSRTCINVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLQAVAVHAVSWMWPSDAPLLARPANSPRTAKHSPTPLTTMLPVLRRRARRRALLWDTLFRWA 1209
            LHAKANPLLT SSE SG SFVPLEVAAQTGRSAVV ELLREFGIRCCGGPSG L DALRVAA+YGQVDIMS++M AGVVDPVGLALLAAVG GKEAAVGFLLRQQ+ERWQT YVN A DDDGLTALLWSF G NNK CNPRITRRLVDAGADTTS VQLRAERSRT +N+TPLEYVN                     EATRRVLLQAVAVHAVSWMWPSD P+LARPANSPRT KHSPTPL+TML VLRRRAR RA LWDTLFRWA
Sbjct:   32 LHAKANPLLTRSSECSGRSFVPLEVAAQTGRSAVVRELLREFGIRCCGGPSGRLLDALRVAAVYGQVDIMSIIMGAGVVDPVGLALLAAVGSGKEAAVGFLLRQQQERWQTSYVNTACDDDGLTALLWSFGGNNNKPCNPRITRRLVDAGADTTSTVQLRAERSRTRVNMTPLEYVN---------------------EATRRVLLQAVAVHAVSWMWPSDDPVLARPANSPRTTKHSPTPLSTMLTVLRRRARTRASLWDTLFRWA 277          
BLAST of mRNA_Ecto-sp9_F_contig1030.309.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 9.560e-48
Identity = 121/273 (44.32%), Postives = 163/273 (59.71%), Query Frame = 1
Query:  412 LHAKANPLLTWSSESSGTSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAALYGQVDIMSMLMDAGVVDPVGLALLAAVGGGKEAAVGFLLRQQEERW---QTCYVNIARDDDGLTALLWSFRGTNNKSCNPRITRRLVDAGADTTSAVQLRAERSRTCINVTPLEYVNDWALRETN--GDHPATDEQLLRLEATRRVLLQAVAVHAVSWMWPSDAPLLARPA--NSPRTAKHSPTPLTTMLPVLRRRARRRALLWDTLFRWA 1209
            L AKA+PLLT   + SG +F+PL+ AA+ G   VV+EL+R+ GI  CGG SGG+ AL+ AA +  ++IM +L +AGVVD  GLAL+ A G G E  + FLL Q   R    +  YVN  RD  G+T LLW  +        PR+ R LV+AGADTTS V +R +     +++TPL    +    +    G  PA+ EQL +LEA RR+LL+  AVHAVSW+WPSD   + R A   + RT   S T +T  + V RRRAR R +    L R++
Sbjct:  168 LLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDT-GLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNT-RDRGGVTPLLWGIQ-----HYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAARGTDRTTAIS-TAVTLPMLVTRRRARGRKVPLAALLRYS 432          
BLAST of mRNA_Ecto-sp9_F_contig1030.309.1 vs.
Match: EsV-1-1 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 1.110e-45
Identity = 155/408 (37.99%), Postives = 208/408 (50.98%), Query Frame = 1
Query:   10 VELDEHGKDKYGISRGPIPIINAAGRGLSKIVRKLVEQGHDVSLTNDAGFTALH--TAAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHAKANPLLTWSSESSGTSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAALYGQVDIMSMLMDAGVVDPVGLALLAAVGGGKEAAVGFLLRQQEERW----QTCYVNIARDDDGLTALLWSFRGTNNKSCNPRITRRLVDAGADTTSAVQLRAERSRTCINVTPLEYVNDWALRETNGD-HPATDEQLLRLEATRRVLLQAVAVHAVSWMWPSDAPLLARPANSPRTAKHSPTP-LTTMLPVLRRRARRRALLWDTLFRWA 1209
            VE+D+  ++ YG +    P++ A   G S+I + L+++G +VS+ +  GFTALH   A                                     XXXXXXXXXXXXX                            L   ANPLL  +S    T+ VPL++AA+ G + VV EL++E GI  C   S G  AL  AA    +DIM++L +AGVVD  G AL  A G G EA+V FLLR + +      +  Y+N ARD +G T L+   +G  +++  PRI R LVDAGADTTS VQ+   +     N TPL +      ++   D  PAT E L RLEA  R+LL+  AVHAVSW+WPS AP + R   +  T    P P L  MLP+L+RR +RR  L  TL R++
Sbjct:  130 VEIDQ--RNSYGAT----PLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDT-GKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLN-ARDVNGYTPLVVCTQGCFSQA--PRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGR---ATETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYS 524          
BLAST of mRNA_Ecto-sp9_F_contig1030.309.1 vs.
Match: EsV-1-199 (n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 1.470e-45
Identity = 121/272 (44.49%), Postives = 161/272 (59.19%), Query Frame = 1
Query:  412 LHAKANPLLTWSSESSGTSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAALYGQVDIMSMLMDAGVVDPVGLALLAAVGGGKEAAVGFLLRQQEERWQTCYVNIARDDDGLTALLWSFRGTNNKSCNPRITRRLVDAGADTTSAVQLRAERSR-TCINVTPLEYVNDWALRETNGD-HPATDEQLLRLEATRRVLLQAVAVHAVSWMWPS-DAPLLARPANSPRTAKHSP---TPLTTMLPVLRRRARRRALLWDTLFRWA 1209
            L AKANPLL  S    G S+VPLE+AA  G   V  E++R+ GIR CGGPSGG++ALR AA    ++ M++L+DAG V   G AL+ A   G+  AV FLLR+++      YVN  RD  G T ++ +      + C+P+I R LVDAGA+TT AV +     R    + TPL +     LRE   D   AT EQL RL+ TR +L +A AVHAVSW+W S + P +A+ A   +T   S    TPL  M P+LRR+   R +L  TLFR++
Sbjct:  165 LRAKANPLLC-SHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQAD-ADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTR-LLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYS 433          
BLAST of mRNA_Ecto-sp9_F_contig1030.309.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 2.030e-45
Identity = 118/271 (43.54%), Postives = 158/271 (58.30%), Query Frame = 1
Query:  412 LHAKANPLLTWSSESSGTSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAALYGQVDIMSMLMDAGVVDPVGLALLAAVGGGKEAAVGFLLRQQEERWQT---CYVNIARDDDGLTALLWSFRGTNNKSCNPRITRRLVDAGADTTSAVQLRAERSRTCINVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLQAVAVHAVSWMWPSDAPLL--ARPANSPRTAKHSPTPLTTMLPVLRRRARRRALLWDTLFRWA 1209
            L AKA+PLLT +S+S    F+PL+VAAQ G   VV+EL+R+ GI  CGG SGG +ALR AAL+ ++DIM++L DAGVVD  GLAL+ A G G EA + FLL Q   R  T    Y+N   +  GLT+LL   +      C PR+ + LV+AGADTTS V +  +      ++TPL       L       P T E+  +LE  RR+LL+  AVHAVSW+WPSD P +  A    + RT   S      ++ ++ RR R R  L   L R++
Sbjct:  168 LLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDT-GLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTL-NGVGLTSLLDGIQ-----RCRPRVVQLLVEAGADTTSPVLICNQPGEDDFHITPLGLT--MCLLGGRSAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAALLRYS 429          
BLAST of mRNA_Ecto-sp9_F_contig1030.309.1 vs.
Match: EsV-1-199 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 3.380e-44
Identity = 118/272 (43.38%), Postives = 158/272 (58.09%), Query Frame = 1
Query:  418 AKANPLLTWSSESSGTSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAALYGQVDIMSMLMDAGVVDPVGLALLAAVGGGKEAAVGFLLRQQE--ERWQTCYVNIARDDDGLTALLWSFRGTNNKSCNPRITRRLVDAGADTTSAVQLRAERSRTCINVTPLEYVNDWALRETNGDHPATDEQLLR-LEATRRVLLQAVAVHAVSWMWPSDAPLLARPAN---SPRTAKHSPTP--LTTMLPVLRRRARRRALLWDTLFRWA 1209
            AKANPLLT    +     +PL+ AAQ GR  VV ELL+ FGIR CGG +GG+ AL++AA+   +D+M  L  AGVVD  G+AL+ A   G    V FLL+QQ      ++ YV+  RD  G T L+ +     N+SC+P++ R LVDAGADTTS V+   +     +  TPL    + ALR       A  ++LLR LE  RR+LL+  AVHA SW+W +  P +  PA    +  T   S T   L T+LP+LRRRAR R  +  +L R+A
Sbjct:  169 AKANPLLT--RVNLAWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDT-GIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATE-ALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYA 436          
BLAST of mRNA_Ecto-sp9_F_contig1030.309.1 vs.
Match: EsV-1-199 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU0_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 6.500e-34
Identity = 98/226 (43.36%), Postives = 130/226 (57.52%), Query Frame = 1
Query:  454 SSGTSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAALYGQVDIMSMLMDAGVVDPVGLALLAAVGGGKEAAVGFLLRQQ--EERWQTCYVNIA-RDDDGLTALLWSFRGTNNKSCNPRITRRLVDAGADTTSAVQLRAERSRTCINVTPLEYVND--WALRETNGDHPATDEQLLRLEATRRVLLQAVAVHAVSWMWPSDAPLLARPANS-PRTA 1113
            SSG   VPL+VAA +G S VV  L++E GI+ C   + G  AL +AA    +D +++L  AG VD  G AL+ A     EA+    LRQ+  EE+    Y +I  R   GLTAL++S +   +++  PRI R L++AGADTTS ++          N TPL       W     NG+ PAT+E L RLEA RR+LL+A AVHAVSW+WPSDA  +   A   PR A
Sbjct:  165 SSGFPGVPLDVAASSGHSGVVRHLVQELGIKGCNPENAGKQALLLAASKRDLDTLAILTGAGAVDTSGSALMCAA----EASFKHFLRQRLKEEKGGVEYASINDRISSGLTALVFSIQRCLSQT--PRIVRLLINAGADTTSVIRGTNSEGEVQCNGTPLALTTSYLWEKILDNGE-PATEEHLQRLEAIRRLLLRAEAVHAVSWLWPSDASFVGHAAEKWPRAA 383          
BLAST of mRNA_Ecto-sp9_F_contig1030.309.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 1.070e-32
Identity = 92/214 (42.99%), Postives = 125/214 (58.41%), Query Frame = 1
Query:  418 AKANPLLTWSSESSGTSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAALYGQVDIMSMLMDAGVVDPVGLALLAAVGGGKEAAVGFLLRQQE------ERWQTCYVNIARDDDGLTALLWSFRG-TNNKSCNPRITRRLVDAGADTTSAVQLRAERSRTCINVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLQAVA 1038
            AKANPLLT  + S G +FVPL+ AA+ G++ VV EL+++  I+ CGG SGG+ ALR+AAL   VD+MS+L DAGV+D  G AL+ A G   EA V  LL+Q+       E +   YVN   D  G T LL S  G      C+PR+ R LVDAGADT SAV L+    +   +VTP+++         +G   A ++ + +L A  R+  Q  A
Sbjct:  172 AKANPLLTKPTPS-GVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDT-GEALITAAGRNDEAGVKLLLQQRHGTSAGGELYM--YVNDTHDLVGRTPLLCSIDGGMAGFRCSPRVVRLLVDAGADTVSAVPLKGTAGQIGRSVTPIDFATCSLHENMDGGKTAMEKHVHKLRAIHRLFSQVEA 381          
BLAST of mRNA_Ecto-sp9_F_contig1030.309.1 vs.
Match: EsV-1-199 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNJ3_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 2.630e-32
Identity = 109/267 (40.82%), Postives = 147/267 (55.06%), Query Frame = 1
Query:  424 ANPLL-TWSSESSGTSFV--PLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAALYGQVDIMSMLMDAGVVDPVGLALLAAVGGGKEAAVGFLLRQQEERWQTCYVNIARDDDGLTALLWSFRGTNNKSCNPRITRRLVDAGADTT--SAVQ--LRAERSRTCINVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLQAVAVHAVSWMWPSDAPLLARPANSPRTAKHSPTPLTTMLPVLRRRARRRALLWDTLFR 1203
            ANP L + ++   G  +V  PL+ A++ G  +VV ELL   G++ CGGPS G DAL +AA   +V +++ML DAGVVD  G A++AA G G+EA+V FLL+Q+    +  Y N  RD+ G T    +  G       PRI R L+DAGAD T  S VQ  LR +  R     T L+ V      +     PATD+Q+LRL+A RR+LLQ  AV A+SW WP   P + +  +    A   P  L   +P   RR   R +L   LFR
Sbjct:  195 ANPTLGSMNTRMDGLKWVCLPLDAASERGHESVVRELLN-LGLKACGGPSRGRDALFMAAQDNRVGVLTMLRDAGVVDR-GKAIVAAAGFGREASVRFLLKQERATTRIDYANT-RDEAGRTLFYRAAWGAY-----PRIGRWLLDAGADETLTSVVQPFLRYDNMR--FEDTALKLVLRSLSSKQYRFEPATDDQMLRLQAFRRLLLQIDAVRAISWPWPIPVPSIPQGVSGGTVATSKPVKL---MPTKWRRTGSRHVLAAQLFR 448          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1030.309.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
EsV-1-12.260e-20895.78n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
Uncharacterized8.570e-13881.27protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized9.560e-4844.32protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
EsV-1-11.110e-4537.99n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
EsV-1-1991.470e-4544.49n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI[more]
Uncharacterized2.030e-4543.54protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
EsV-1-1993.380e-4443.38n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
EsV-1-1996.500e-3443.36n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
Uncharacterized1.070e-3242.99protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
EsV-1-1992.630e-3240.82n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1030contigEcto-sp9_F_contig1030:8366..9574 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score588.6
Seed ortholog evalue2.3e-165
Seed eggNOG ortholog2880.D7FVU3
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAnkyrin-repeat protein similar to EsV-1-1
Ec32 orthologEc-01_002170.1
Exons1
Model size1209
Cds size1209
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928231.408518-CDS-Ecto-sp9_F_contig1030:8365..95741622928231.408518-CDS-Ecto-sp9_F_contig1030:8365..9574Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1030 8366..9574 +
1692277803.8024383-CDS-Ecto-sp9_F_contig1030:8365..95741692277803.8024383-CDS-Ecto-sp9_F_contig1030:8365..9574Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1030 8366..9574 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1030.309.1prot_Ecto-sp9_F_contig1030.309.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1030 8366..9574 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1030.309.1

>prot_Ecto-sp9_F_contig1030.309.1 ID=prot_Ecto-sp9_F_contig1030.309.1|Name=mRNA_Ecto-sp9_F_contig1030.309.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=403bp
MELVELDEHGKDKYGISRGPIPIINAAGRGLSKIVRKLVEQGHDVSLTND
AGFTALHTAAHHGHADIARVLAKAGSDLEATTLEGDTPLHLATSVGETAA
MRALIEEGASVDSRNPGGATPLYIAAMQGHLGAVKVLLHAKANPLLTWSS
ESSGTSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAALY
GQVDIMSMLMDAGVVDPVGLALLAAVGGGKEAAVGFLLRQQEERWQTCYV
NIARDDDGLTALLWSFRGTNNKSCNPRITRRLVDAGADTTSAVQLRAERS
RTCINVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLQAVAVHAV
SWMWPSDAPLLARPANSPRTAKHSPTPLTTMLPVLRRRARRRALLWDTLF
RWA
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mRNA from alignment at Ecto-sp9_F_contig1030:8366..9574+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1030.309.1 ID=mRNA_Ecto-sp9_F_contig1030.309.1|Name=mRNA_Ecto-sp9_F_contig1030.309.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1209bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1030:8366..9574+ (Ectocarpus species9 EcSCA_722f female)
ATGGAACTTGTAGAGCTCGACGAACACGGCAAGGACAAATATGGCATCTC GAGAGGCCCCATCCCCATCATCAACGCGGCCGGGAGAGGTTTGTCGAAAA TCGTCAGGAAATTGGTCGAGCAGGGACACGATGTATCGCTAACAAACGAC GCTGGTTTCACGGCTCTGCATACTGCGGCCCACCACGGCCACGCCGACAT CGCGAGGGTACTGGCCAAGGCCGGCTCGGATCTAGAGGCGACGACCCTCG AAGGCGACACGCCGCTTCATTTGGCCACGAGCGTGGGGGAAACTGCAGCG ATGAGGGCCCTGATCGAAGAAGGCGCTTCCGTCGACAGCCGTAATCCCGG AGGGGCGACACCGCTGTACATTGCGGCGATGCAGGGACACCTGGGCGCGG TGAAGGTGCTCCTTCACGCCAAGGCGAACCCTCTGCTGACTTGGTCGTCG GAATCTTCAGGCACGAGCTTCGTCCCGCTGGAAGTCGCGGCGCAGACCGG CCGATCGGCAGTGGTGAGCGAACTGTTGCGCGAATTCGGTATCCGTTGTT GTGGTGGGCCGAGTGGTGGGTTAGATGCTCTCCGCGTCGCCGCACTGTAT GGACAGGTTGATATAATGTCGATGCTTATGGATGCCGGAGTGGTGGATCC TGTCGGTCTAGCCCTGCTCGCCGCCGTCGGGGGCGGCAAGGAGGCAGCGG TAGGGTTTCTTTTGCGGCAGCAGGAGGAGCGGTGGCAAACTTGTTACGTG AACATCGCCCGCGACGACGATGGCTTAACGGCTTTGCTGTGGAGCTTCCG GGGTACCAATAACAAGTCGTGCAACCCCAGGATCACGCGGCGTCTTGTGG ACGCAGGGGCGGACACGACCTCGGCCGTGCAGCTCCGCGCCGAACGCAGT CGCACCTGCATCAATGTGACGCCACTGGAGTACGTGAACGATTGGGCCCT TCGCGAAACCAACGGAGACCACCCTGCAACCGACGAGCAACTGCTCCGGC TAGAGGCTACCCGCCGCGTGCTTTTGCAAGCGGTGGCCGTTCACGCAGTT TCTTGGATGTGGCCCAGCGATGCCCCACTTCTCGCACGTCCCGCAAATAG CCCGAGAACGGCCAAGCATTCTCCAACTCCGCTGACGACGATGCTGCCGG TCTTGAGGCGGAGGGCGAGAAGGCGTGCTTTGCTTTGGGACACGCTGTTC AGGTGGGCG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1030:8366..9574+

>mRNA_Ecto-sp9_F_contig1030.309.1 ID=mRNA_Ecto-sp9_F_contig1030.309.1|Name=mRNA_Ecto-sp9_F_contig1030.309.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=2418bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1030:8366..9574+ (Ectocarpus species9 EcSCA_722f female)
ATGGAACTTGTAGAGCTCGACGAACACGGCAAGGACAAATATGGCATCTC
GAGAGGCCCCATCCCCATCATCAACGCGGCCGGGAGAGGTTTGTCGAAAA
TCGTCAGGAAATTGGTCGAGCAGGGACACGATGTATCGCTAACAAACGAC
GCTGGTTTCACGGCTCTGCATACTGCGGCCCACCACGGCCACGCCGACAT
CGCGAGGGTACTGGCCAAGGCCGGCTCGGATCTAGAGGCGACGACCCTCG
AAGGCGACACGCCGCTTCATTTGGCCACGAGCGTGGGGGAAACTGCAGCG
ATGAGGGCCCTGATCGAAGAAGGCGCTTCCGTCGACAGCCGTAATCCCGG
AGGGGCGACACCGCTGTACATTGCGGCGATGCAGGGACACCTGGGCGCGG
TGAAGGTGCTCCTTCACGCCAAGGCGAACCCTCTGCTGACTTGGTCGTCG
GAATCTTCAGGCACGAGCTTCGTCCCGCTGGAAGTCGCGGCGCAGACCGG
CCGATCGGCAGTGGTGAGCGAACTGTTGCGCGAATTCGGTATCCGTTGTT
GTGGTGGGCCGAGTGGTGGGTTAGATGCTCTCCGCGTCGCCGCACTGTAT
GGACAGGTTGATATAATGTCGATGCTTATGGATGCCGGAGTGGTGGATCC
TGTCGGTCTAGCCCTGCTCGCCGCCGTCGGGGGCGGCAAGGAGGCAGCGG
TAGGGTTTCTTTTGCGGCAGCAGGAGGAGCGGTGGCAAACTTGTTACGTG
AACATCGCCCGCGACGACGATGGCTTAACGGCTTTGCTGTGGAGCTTCCG
GGGTACCAATAACAAGTCGTGCAACCCCAGGATCACGCGGCGTCTTGTGG
ACGCAGGGGCGGACACGACCTCGGCCGTGCAGCTCCGCGCCGAACGCAGT
CGCACCTGCATCAATGTGACGCCACTGGAGTACGTGAACGATTGGGCCCT
TCGCGAAACCAACGGAGACCACCCTGCAACCGACGAGCAACTGCTCCGGC
TAGAGGCTACCCGCCGCGTGCTTTTGCAAGCGGTGGCCGTTCACGCAGTT
TCTTGGATGTGGCCCAGCGATGCCCCACTTCTCGCACGTCCCGCAAATAG
CCCGAGAACGGCCAAGCATTCTCCAACTCCGCTGACGACGATGCTGCCGG
TCTTGAGGCGGAGGGCGAGAAGGCGTGCTTTGCTTTGGGACACGCTGTTC
AGGTGGGCGATGGAACTTGTAGAGCTCGACGAACACGGCAAGGACAAATA
TGGCATCTCGAGAGGCCCCATCCCCATCATCAACGCGGCCGGGAGAGGTT
TGTCGAAAATCGTCAGGAAATTGGTCGAGCAGGGACACGATGTATCGCTA
ACAAACGACGCTGGTTTCACGGCTCTGCATACTGCGGCCCACCACGGCCA
CGCCGACATCGCGAGGGTACTGGCCAAGGCCGGCTCGGATCTAGAGGCGA
CGACCCTCGAAGGCGACACGCCGCTTCATTTGGCCACGAGCGTGGGGGAA
ACTGCAGCGATGAGGGCCCTGATCGAAGAAGGCGCTTCCGTCGACAGCCG
TAATCCCGGAGGGGCGACACCGCTGTACATTGCGGCGATGCAGGGACACC
TGGGCGCGGTGAAGGTGCTCCTTCACGCCAAGGCGAACCCTCTGCTGACT
TGGTCGTCGGAATCTTCAGGCACGAGCTTCGTCCCGCTGGAAGTCGCGGC
GCAGACCGGCCGATCGGCAGTGGTGAGCGAACTGTTGCGCGAATTCGGTA
TCCGTTGTTGTGGTGGGCCGAGTGGTGGGTTAGATGCTCTCCGCGTCGCC
GCACTGTATGGACAGGTTGATATAATGTCGATGCTTATGGATGCCGGAGT
GGTGGATCCTGTCGGTCTAGCCCTGCTCGCCGCCGTCGGGGGCGGCAAGG
AGGCAGCGGTAGGGTTTCTTTTGCGGCAGCAGGAGGAGCGGTGGCAAACT
TGTTACGTGAACATCGCCCGCGACGACGATGGCTTAACGGCTTTGCTGTG
GAGCTTCCGGGGTACCAATAACAAGTCGTGCAACCCCAGGATCACGCGGC
GTCTTGTGGACGCAGGGGCGGACACGACCTCGGCCGTGCAGCTCCGCGCC
GAACGCAGTCGCACCTGCATCAATGTGACGCCACTGGAGTACGTGAACGA
TTGGGCCCTTCGCGAAACCAACGGAGACCACCCTGCAACCGACGAGCAAC
TGCTCCGGCTAGAGGCTACCCGCCGCGTGCTTTTGCAAGCGGTGGCCGTT
CACGCAGTTTCTTGGATGTGGCCCAGCGATGCCCCACTTCTCGCACGTCC
CGCAAATAGCCCGAGAACGGCCAAGCATTCTCCAACTCCGCTGACGACGA
TGCTGCCGGTCTTGAGGCGGAGGGCGAGAAGGCGTGCTTTGCTTTGGGAC
ACGCTGTTCAGGTGGGCG
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