prot_Ecto-sp8_S_contig10222.365.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10222.365.1
Unique Nameprot_Ecto-sp8_S_contig10222.365.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length120
Homology
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Match: D8LFE5_ECTSI (tRNA-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFE5_ECTSI)

HSP 1 Score: 241 bits (614), Expect = 2.720e-78
Identity = 117/119 (98.32%), Postives = 119/119 (100.00%), Query Frame = 0
Query:    1 MKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKVLPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 119
            MKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELV+PPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDK+LPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR
Sbjct:  162 MKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVVPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKILPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 280          
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Match: A0A7S2Y0W4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0W4_9STRA)

HSP 1 Score: 150 bits (380), Expect = 3.140e-43
Identity = 70/119 (58.82%), Postives = 89/119 (74.79%), Query Frame = 0
Query:    1 MKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKVLPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 119
            M+GR+V+V+CNLKPRNL GFKS GMV+CAV    DG E VE V PPEG+AVGER+ +EGL GGPFEP++AAQ+EKKKV   VLP L+TD      W+ H +++S G C A T+ +G +R
Sbjct:  133 MQGRRVLVLCNLKPRNLVGFKSHGMVLCAVENKPDGSEKVEFVEPPEGAAVGERVQYEGLGGGPFEPITAAQVEKKKVFPAVLPNLSTDANHVGMWKGHKMMTSAGPCVAATISNGKLR 251          
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Match: A0A024UG59_9STRA (Methionine-tRNA ligase, beta subunit n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UG59_9STRA)

HSP 1 Score: 132 bits (333), Expect = 2.230e-36
Identity = 62/119 (52.10%), Postives = 85/119 (71.43%), Query Frame = 0
Query:    1 MKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKVLPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 119
            M+GR+++VMCNLKPRNL GFKS GMV+CAV    DG E+V  V PP G+ +GER+ +EGL G P+ P   AQ+EKKKVL      L +D  G  +W+DH +++S G CT+P++R+G +R
Sbjct:  116 MQGRRLLVMCNLKPRNLVGFKSHGMVLCAVSTNEDGSENVAFVEPPAGAGIGERVMYEGLTGEPWTP---AQVEKKKVLVTAGEGLVSDENGVAKWKDHVMLTSAGPCTSPSIRNGILR 231          
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Match: A0A397BX65_9STRA (tRNA-binding domain-containing protein (Fragment) n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BX65_9STRA)

HSP 1 Score: 132 bits (332), Expect = 2.360e-36
Identity = 63/119 (52.94%), Postives = 83/119 (69.75%), Query Frame = 0
Query:    1 MKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKVLPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 119
            M+GR V+VMCNLK RNL GFKS GMV+CAV    DG E +  V PP G+ VGER++++GL GG  EP + AQ+EKKKVL      L +D EG  +W DH +++S G CT+P++R G +R
Sbjct:  104 MQGRLVLVMCNLKARNLVGFKSHGMVLCAVATNADGSESIAFVEPPAGAVVGERVTYDGLTGG--EPWTPAQVEKKKVLVSAGEGLVSDAEGVAKWNDHVMLTSAGPCTSPSIRSGILR 220          
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Match: D0MS46_PHYIT (tRNA-binding domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0MS46_PHYIT)

HSP 1 Score: 131 bits (329), Expect = 8.050e-36
Identity = 64/119 (53.78%), Postives = 84/119 (70.59%), Query Frame = 0
Query:    1 MKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKVLPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 119
            M+ R+V+V+CNLKPRNL GF+S GMV+CA   L DGKE V  V PPEG+ +GER++FEGL G PF P   AQ+EKKKVL  +  ++ TD  G  +W++H   +S G CTAP V +G +R
Sbjct:  113 MQDRRVLVLCNLKPRNLVGFRSHGMVMCAAVPLEDGKEKVAFVTPPEGAKIGERITFEGLTGEPFSP---AQVEKKKVLTVLGDDMKTDDNGVAKWKEHVFGTSAGPCTAP-VNNGVIR 227          
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Match: A0A397EZY8_9STRA (tRNA-binding domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397EZY8_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.200e-35
Identity = 63/119 (52.94%), Postives = 83/119 (69.75%), Query Frame = 0
Query:    1 MKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKVLPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 119
            M+GR V+VMCNLK RNL GFKS GMV+CAV    DG E V  V PP G+ VGER++++G+ GG  EP + AQ+EKKKVL      L +D EG  +W DH +++S G CT+P++R G +R
Sbjct:  140 MQGRLVLVMCNLKARNLVGFKSHGMVLCAVATNADGSESVAFVEPPAGAVVGERVTYDGVTGG--EPWTPAQVEKKKVLVSAGEGLVSDAEGVAKWNDHVMLTSAGPCTSPSIRSGILR 256          
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Match: G4YER7_PHYSP (tRNA-binding domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YER7_PHYSP)

HSP 1 Score: 130 bits (326), Expect = 2.220e-35
Identity = 65/119 (54.62%), Postives = 83/119 (69.75%), Query Frame = 0
Query:    1 MKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKVLPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 119
            M+  +V+V+CNLKPRNL GF+S GMV+CA   L DGKE V  V PPEG+ VGER++FEGL G PF P   AQ+EKKKVL  +  E+ TD  G  +W++H   +S G CTAP V +G +R
Sbjct:  112 MQDARVLVLCNLKPRNLVGFRSHGMVMCAAVPLEDGKEKVAFVTPPEGAKVGERITFEGLTGEPFSP---AQVEKKKVLTVLGDEMKTDDSGVAKWKEHVFGTSAGPCTAP-VNNGLIR 226          
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Match: A0A225VLY1_9STRA (Methionine-tRNA ligase, beta subunit n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VLY1_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.100e-34
Identity = 64/119 (53.78%), Postives = 85/119 (71.43%), Query Frame = 0
Query:    1 MKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKVLPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 119
            M+ R V+V+CNLKPRNL GF+S GMV+CA   L DGKE V  V PP+G+ VGER++FEGL G   EP+S AQ+EKKKVL  +  ++ TD +G  +W++H   +S G CTAP V +G +R
Sbjct:  107 MQDRSVLVLCNLKPRNLVGFRSHGMVMCAAVPLEDGKEKVAFVTPPQGAKVGERVTFEGLTG---EPLSPAQVEKKKVLTVLGDDMKTDDKGVAKWKEHVFNTSAGPCTAP-VTNGLIR 221          
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Match: H3G6E9_PHYRM (tRNA-binding domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6E9_PHYRM)

HSP 1 Score: 125 bits (315), Expect = 1.380e-34
Identity = 60/110 (54.55%), Postives = 79/110 (71.82%), Query Frame = 0
Query:    1 MKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKVLPELTTDVEGTVRWRDHALVSSCGACTA 110
            M+ R+V+V+CNLKPRNL GF+S GMV+CA   L DGKE V  V PPEG+ +GER++FEGL+G PF P   AQ+EKKKVL  +  ++ TD  G  +W++H   +S G CTA
Sbjct:   48 MQDRRVLVLCNLKPRNLVGFRSHGMVMCAAVPLEDGKEKVAFVTPPEGAKIGERITFEGLSGEPFSP---AQVEKKKVLTVLGDDMKTDDNGVAKWKEHEFGTSAGPCTA 154          
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Match: A0A8J5IV42_9STRA (tRNA-binding domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IV42_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.650e-34
Identity = 64/119 (53.78%), Postives = 84/119 (70.59%), Query Frame = 0
Query:    1 MKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKVLPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 119
            M+ R+V+V+CNLKPRNL GF+S GMV+CA   LGD KE V  V PPEG+ +GER++FEGL G PF P   AQ+EKKKVL  +  ++ TD  G  +W++H   +S G CTAP V +G +R
Sbjct:  265 MQDRRVLVLCNLKPRNLVGFRSHGMVMCAAVPLGDDKEKVAFVTPPEGAKIGERITFEGLTGEPFSP---AQVEKKKVLTVLGDDMKTDDNGVAKWKEHVFGTSAGPCTAP-VNNGVIR 379          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFE5_ECTSI2.720e-7898.32tRNA-binding domain-containing protein n=2 Tax=Ect... [more]
A0A7S2Y0W4_9STRA3.140e-4358.82Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A024UG59_9STRA2.230e-3652.10Methionine-tRNA ligase, beta subunit n=1 Tax=Aphan... [more]
A0A397BX65_9STRA2.360e-3652.94tRNA-binding domain-containing protein (Fragment) ... [more]
D0MS46_PHYIT8.050e-3653.78tRNA-binding domain-containing protein n=11 Tax=Ph... [more]
A0A397EZY8_9STRA1.200e-3552.94tRNA-binding domain-containing protein n=3 Tax=Aph... [more]
G4YER7_PHYSP2.220e-3554.62tRNA-binding domain-containing protein n=3 Tax=Phy... [more]
A0A225VLY1_9STRA1.100e-3453.78Methionine-tRNA ligase, beta subunit n=1 Tax=Phyto... [more]
H3G6E9_PHYRM1.380e-3454.55tRNA-binding domain-containing protein n=1 Tax=Phy... [more]
A0A8J5IV42_9STRA1.650e-3453.78tRNA-binding domain-containing protein n=1 Tax=Phy... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 1..119
e-value: 9.4E-29
score: 102.3
NoneNo IPR availablePANTHERPTHR11586FAMILY NOT NAMEDcoord: 1..118
NoneNo IPR availablePANTHERPTHR11586:SF39NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEINcoord: 1..118
IPR002547tRNA-binding domainPFAMPF01588tRNA_bindcoord: 2..53
e-value: 2.0E-9
score: 37.4
IPR002547tRNA-binding domainPROSITEPS50886TRBDcoord: 1..56
score: 16.927
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 1..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10222contigEcto-sp8_S_contig10222:1408..3860 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10222.365.1mRNA_Ecto-sp8_S_contig10222.365.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10222 625..4993 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10222.365.1 ID=prot_Ecto-sp8_S_contig10222.365.1|Name=mRNA_Ecto-sp8_S_contig10222.365.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=120bp
MKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSA
VGERLSFEGLAGGPFEPVSAAQMEKKKVLDKVLPELTTDVEGTVRWRDHA
LVSSCGACTAPTVRDGAVR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002547tRNA-bd_dom
IPR012340NA-bd_OB-fold