mRNA_Ecto-sp8_S_contig10222.365.1 (mRNA) Ectocarpus species8 EcLAC_412
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Overview
Homology
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Match: D8LFE5_ECTSI (tRNA-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFE5_ECTSI) HSP 1 Score: 477 bits (1227), Expect = 7.480e-165 Identity = 244/258 (94.57%), Postives = 249/258 (96.51%), Query Frame = 1
Query: 1 AHQDCIGGVPSATAPATALQLVDSTIATLEASLGLPPGAVLTPADAKDIAGGNAKRPTKGKEGANKGGRKKAGKAASSTAGVSSADQPDGTKVDLRVGQITRVWTHETADKLYCEEIDVGEGAPRNIASGLVPHYSLEEMKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKVLPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 774
A +D IGGVPS TAPATALQLVDSTIATLEASLGLPPGAVLTP DAK IAGG+ KRPTKGKEG NKGGRKKAGKAA+S GVSSADQPDGTKVDLRVGQITRVWTHETADKLYCEEIDVGEGAPRNIASGLVPHYSLEEMKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELV+PPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDK+LPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR
Sbjct: 23 ALKDSIGGVPSTTAPATALQLVDSTIATLEASLGLPPGAVLTPVDAKGIAGGDTKRPTKGKEGVNKGGRKKAGKAAASNVGVSSADQPDGTKVDLRVGQITRVWTHETADKLYCEEIDVGEGAPRNIASGLVPHYSLEEMKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVVPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKILPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 280
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Match: A0A7S2Y0W4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0W4_9STRA) HSP 1 Score: 247 bits (631), Expect = 2.220e-75 Identity = 116/173 (67.05%), Postives = 138/173 (79.77%), Query Frame = 1
Query: 256 DQPDGTKVDLRVGQITRVWTHETADKLYCEEIDVGEGAPRNIASGLVPHYSLEEMKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKVLPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 774
DQPD TK+DLRVG+IT+VW HETADKLYCEEIDVGE PR IASGLVPHYSLEEM+GR+V+V+CNLKPRNL GFKS GMV+CAV DG E VE V PPEG+AVGER+ +EGL GGPFEP++AAQ+EKKKV VLP L+TD W+ H +++S G C A T+ +G +R
Sbjct: 79 DQPDITKIDLRVGKITKVWRHETADKLYCEEIDVGEDEPRAIASGLVPHYSLEEMQGRRVLVLCNLKPRNLVGFKSHGMVLCAVENKPDGSEKVEFVEPPEGAAVGERVQYEGLGGGPFEPITAAQVEKKKVFPAVLPNLSTDANHVGMWKGHKMMTSAGPCVAATISNGKLR 251
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Match: D0MS46_PHYIT (tRNA-binding domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=D0MS46_PHYIT) HSP 1 Score: 218 bits (555), Expect = 2.050e-64 Identity = 105/173 (60.69%), Postives = 132/173 (76.30%), Query Frame = 1
Query: 256 DQPDGTKVDLRVGQITRVWTHETADKLYCEEIDVGEGAPRNIASGLVPHYSLEEMKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKVLPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 774
+QP+ TK+D+RVG+I +VW HETADKLYCEEIDVGE PR+IASGLV HYSLEEM+ R+V+V+CNLKPRNL GF+S GMV+CA L DGKE V V PPEG+ +GER++FEGL G PF P AQ+EKKKVL + ++ TD G +W++H +S G CTAP V +G +R
Sbjct: 59 NQPEITKLDIRVGKIVKVWKHETADKLYCEEIDVGEDEPRHIASGLVYHYSLEEMQDRRVLVLCNLKPRNLVGFRSHGMVMCAAVPLEDGKEKVAFVTPPEGAKIGERITFEGLTGEPFSP---AQVEKKKVLTVLGDDMKTDDNGVAKWKEHVFGTSAGPCTAP-VNNGVIR 227
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Match: G4YER7_PHYSP (tRNA-binding domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=G4YER7_PHYSP) HSP 1 Score: 218 bits (554), Expect = 2.800e-64 Identity = 106/173 (61.27%), Postives = 131/173 (75.72%), Query Frame = 1
Query: 256 DQPDGTKVDLRVGQITRVWTHETADKLYCEEIDVGEGAPRNIASGLVPHYSLEEMKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKVLPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 774
+QP+ TK+D+RVG+I +VW HETADKLYCEEIDVGE APR IASGLV HYSLE+M+ +V+V+CNLKPRNL GF+S GMV+CA L DGKE V V PPEG+ VGER++FEGL G PF P AQ+EKKKVL + E+ TD G +W++H +S G CTAP V +G +R
Sbjct: 58 NQPEITKLDIRVGKIVKVWKHETADKLYCEEIDVGEDAPRQIASGLVHHYSLEQMQDARVLVLCNLKPRNLVGFRSHGMVMCAAVPLEDGKEKVAFVTPPEGAKVGERITFEGLTGEPFSP---AQVEKKKVLTVLGDEMKTDDSGVAKWKEHVFGTSAGPCTAP-VNNGLIR 226
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Match: A0A397BX65_9STRA (tRNA-binding domain-containing protein (Fragment) n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BX65_9STRA) HSP 1 Score: 216 bits (549), Expect = 1.270e-63 Identity = 102/173 (58.96%), Postives = 129/173 (74.57%), Query Frame = 1
Query: 256 DQPDGTKVDLRVGQITRVWTHETADKLYCEEIDVGEGAPRNIASGLVPHYSLEEMKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKVLPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 774
+Q + TK+D+RVG+I VW HETADKLYCEEIDVGE APR IASGLV HY+LE+M+GR V+VMCNLK RNL GFKS GMV+CAV DG E + V PP G+ VGER++++GL GG EP + AQ+EKKKVL L +D EG +W DH +++S G CT+P++R G +R
Sbjct: 50 EQAEITKLDIRVGKIVNVWKHETADKLYCEEIDVGEDAPRQIASGLVKHYTLEQMQGRLVLVMCNLKARNLVGFKSHGMVLCAVATNADGSESIAFVEPPAGAVVGERVTYDGLTGG--EPWTPAQVEKKKVLVSAGEGLVSDAEGVAKWNDHVMLTSAGPCTSPSIRSGILR 220
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Match: A0A067CXJ5_SAPPC (tRNA-binding domain-containing protein (Fragment) n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CXJ5_SAPPC) HSP 1 Score: 216 bits (549), Expect = 1.490e-63 Identity = 102/173 (58.96%), Postives = 132/173 (76.30%), Query Frame = 1
Query: 256 DQPDGTKVDLRVGQITRVWTHETADKLYCEEIDVGEGAPRNIASGLVPHYSLEEMKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKVLPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 774
DQP+ TK+D+RVG+IT+VW HETADKLYCEEIDVGEG PR IASGLV HYSLE+M+GR ++VMCNLKPR+L GFKS GMV+CAV DG E V V PP + +GER+ +EGL+G P+ P AQ+EKKKV+ L++D G +W++HA ++S G CT+P+V +G +R
Sbjct: 56 DQPEITKLDIRVGKITKVWKHETADKLYCEEIDVGEGEPRLIASGLVKHYSLEQMQGRMLLVMCNLKPRSLVGFKSHGMVLCAVATDADGSERVAFVEPPANAKIGERIHYEGLSGEPWTP---AQVEKKKVVVVAGEHLSSDANGVAKWKNHAFMTSAGPCTSPSVCNGILR 225
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Match: A0A8J5IV42_9STRA (tRNA-binding domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IV42_9STRA) HSP 1 Score: 219 bits (559), Expect = 4.950e-63 Identity = 120/242 (49.59%), Postives = 159/242 (65.70%), Query Frame = 1
Query: 49 TALQLVDSTIATLEASLGLPPGAVLTPADAKDIAGGNAKRPTKGKEGANKGGRKKAGKAASSTAGVSSADQPDGTKVDLRVGQITRVWTHETADKLYCEEIDVGEGAPRNIASGLVPHYSLEEMKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKVLPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 774
+A + + S I++LE LG+ A + GN K+P + KE + + A + +QP+ TK+D+RVG+I +VW HETADKLYCEEIDVGE PR+IASGLV HYSLEEM+ R+V+V+CNLKPRNL GF+S GMV+CA LGD KE V V PPEG+ +GER++FEGL G PF P AQ+EKKKVL + ++ TD G +W++H +S G CTAP V +G +R
Sbjct: 159 SATEQIQSLISSLETDLGIEANAPI----------GNDKKPQQQKE-------QXXXXXXPAKAPAADPNQPEITKLDIRVGKIVKVWKHETADKLYCEEIDVGEDEPRHIASGLVYHYSLEEMQDRRVLVLCNLKPRNLVGFRSHGMVMCAAVPLGDDKEKVAFVTPPEGAKIGERITFEGLTGEPFSP---AQVEKKKVLTVLGDDMKTDDNGVAKWKEHVFGTSAGPCTAP-VNNGVIR 379
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Match: A0A662WEL3_9STRA (tRNA-binding domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WEL3_9STRA) HSP 1 Score: 215 bits (547), Expect = 5.560e-63 Identity = 106/173 (61.27%), Postives = 129/173 (74.57%), Query Frame = 1
Query: 256 DQPDGTKVDLRVGQITRVWTHETADKLYCEEIDVGEGAPRNIASGLVPHYSLEEMKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKVLPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 774
+QP+ TK+D+RVGQI +VW HETADKLYCEEIDVGE APR IASGLV HYSLEEM+GR+V+V+CNLKPRNL GF+S GMV+C L DGKE V V PP + +GER+SFEGL G PF P AQ+EKKKVL + ++ TD G +W+ H +S G CTAP V +G +R
Sbjct: 77 NQPEITKLDIRVGQIVKVWKHETADKLYCEEIDVGEDAPRQIASGLVFHYSLEEMQGRRVLVLCNLKPRNLVGFRSHGMVMCTAVPLADGKERVAFVTPPTDAKLGERVSFEGLDGEPFSP---AQVEKKKVLAVLGDDMKTDDAGVAKWKTHVFGTSAGPCTAP-VTNGVIR 245
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Match: A0A024UG59_9STRA (Methionine-tRNA ligase, beta subunit n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UG59_9STRA) HSP 1 Score: 214 bits (545), Expect = 7.070e-63 Identity = 100/173 (57.80%), Postives = 130/173 (75.14%), Query Frame = 1
Query: 256 DQPDGTKVDLRVGQITRVWTHETADKLYCEEIDVGEGAPRNIASGLVPHYSLEEMKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKVLPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 774
+Q + TK+D+RVG+I VW HETADKLYCEEIDVGE PR IASGLV HY+LE+M+GR+++VMCNLKPRNL GFKS GMV+CAV DG E+V V PP G+ +GER+ +EGL G P+ P AQ+EKKKVL L +D G +W+DH +++S G CT+P++R+G +R
Sbjct: 62 EQAEITKLDIRVGKIVNVWKHETADKLYCEEIDVGEDEPRQIASGLVKHYTLEQMQGRRLLVMCNLKPRNLVGFKSHGMVLCAVSTNEDGSENVAFVEPPAGAGIGERVMYEGLTGEPWTP---AQVEKKKVLVTAGEGLVSDENGVAKWKDHVMLTSAGPCTSPSIRNGILR 231
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Match: A0A225VLY1_9STRA (Methionine-tRNA ligase, beta subunit n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VLY1_9STRA) HSP 1 Score: 214 bits (544), Expect = 7.220e-63 Identity = 104/173 (60.12%), Postives = 132/173 (76.30%), Query Frame = 1
Query: 256 DQPDGTKVDLRVGQITRVWTHETADKLYCEEIDVGEGAPRNIASGLVPHYSLEEMKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSAVGERLSFEGLAGGPFEPVSAAQMEKKKVLDKVLPELTTDVEGTVRWRDHALVSSCGACTAPTVRDGAVR 774
+QP+ TK+D+RVG+I +VW HETADKLYCEEIDVGE PR IASGLV HY+LEEM+ R V+V+CNLKPRNL GF+S GMV+CA L DGKE V V PP+G+ VGER++FEGL G EP+S AQ+EKKKVL + ++ TD +G +W++H +S G CTAP V +G +R
Sbjct: 53 NQPEITKLDIRVGKIVKVWKHETADKLYCEEIDVGEDEPRQIASGLVHHYTLEEMQDRSVLVLCNLKPRNLVGFRSHGMVMCAAVPLEDGKEKVAFVTPPQGAKVGERVTFEGLTG---EPLSPAQVEKKKVLTVLGDDMKTDDKGVAKWKEHVFNTSAGPCTAP-VTNGLIR 221 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10222.365.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp8_S_contig10222.365.1 >prot_Ecto-sp8_S_contig10222.365.1 ID=prot_Ecto-sp8_S_contig10222.365.1|Name=mRNA_Ecto-sp8_S_contig10222.365.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=120bp MKGRKVIVMCNLKPRNLKGFKSQGMVVCAVGALGDGKEHVELVIPPEGSAback to top mRNA from alignment at Ecto-sp8_S_contig10222:625..4993- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp8_S_contig10222.365.1 ID=mRNA_Ecto-sp8_S_contig10222.365.1|Name=mRNA_Ecto-sp8_S_contig10222.365.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4369bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10222:625..4993- (Ectocarpus species8 EcLAC_412)back to top Coding sequence (CDS) from alignment at Ecto-sp8_S_contig10222:625..4993- >mRNA_Ecto-sp8_S_contig10222.365.1 ID=mRNA_Ecto-sp8_S_contig10222.365.1|Name=mRNA_Ecto-sp8_S_contig10222.365.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=360bp|location=Sequence derived from alignment at Ecto-sp8_S_contig10222:625..4993- (Ectocarpus species8 EcLAC_412)back to top |