prot_Ecto-sp8_S_contig9936.31799.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9936.31799.1
Unique Nameprot_Ecto-sp8_S_contig9936.31799.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length400
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9936.31799.1 vs. uniprot
Match: A0A6H5LCQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCQ2_9PHAE)

HSP 1 Score: 619 bits (1596), Expect = 1.390e-220
Identity = 346/400 (86.50%), Postives = 364/400 (91.00%), Query Frame = 0 
Query:    1 SLFYFLLVLLVKARWHEISVLVVILNQITVSVCGFLTVRMWIYTNDARLMQGSSTILRISSVLEEKNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIVIADTTFWIFGRALLRAIDASLQNSRKRAMKSVLGEDRRESVLATLGGTEADEEGGRRGRCKSAGEGVERERSSRKWSSGRVRRRGSWWGGEGRDESELGGGELQAAKRKVRWAMVFCAHMSLQGYAILLFSILSKYGTSVPLILFGVQMAILPLVWHAFNIQLHAGRSQGSAIGRRSSGVDRGGRRYVVPAVGTGIGNNVGQVNTTSQQGRQXXXXXXK-HQKWIGGVGTTKWRKYGPVLGRWAVAPTETDDAAAAMDAITGETNTNARTGTTHPADGSMSESVSAPPRRGV 399
            SLFYFLLVLLV+ARWHEISVLV+ILNQITVSVCGF TVRMWIYTND RLMQGS TILRIS+ LE+KNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIV+ADT+FWIFGRALLRAIDASLQNSRKRAM+SV G+DRRESVLA LGGTEADEEGGRRG   SAGEG  R   SRKWSSGR++RRGSWWGGEGRDESELGGGELQAAKRKVRW MVFCA MSL+GYAILL SILSKYGT+VPLILFGVQMAI PLVWHAFNIQLHAGRS+GSAIGRRSS VD+GGRRYVVPAVG GI NNVGQVNTTSQ G+ XXXXXX  HQKWIGGVGT +  KYGP L   AVAPTETDDAA A DA+TGETNTNA TGTTHPADGSM+ESVSAPP RGV
Sbjct:   12 SLFYFLLVLLVEARWHEISVLVMILNQITVSVCGFSTVRMWIYTNDTRLMQGSITILRISAALEKKNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIVVADTSFWIFGRALLRAIDASLQNSRKRAMESVFGKDRRESVLAVLGGTEADEEGGRRGSSISAGEGGGR--LSRKWSSGRLQRRGSWWGGEGRDESELGGGELQAAKRKVRWVMVFCALMSLEGYAILLLSILSKYGTTVPLILFGVQMAIFPLVWHAFNIQLHAGRSRGSAIGRRSSSVDQGGRRYVVPAVGGGIRNNVGQVNTTSQHGQXXXXXXXXXHQKWIGGVGTNRRGKYGPALRGHAVAPTETDDAAVATDAVTGETNTNAPTGTTHPADGSMNESVSAPPCRGV 409
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BLAST of mRNA_Ecto-sp8_S_contig9936.31799.1 vs. uniprot
Match: D7G622_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G622_ECTSI)

HSP 1 Score: 609 bits (1570), Expect = 4.050e-217
Identity = 344/388 (88.66%), Postives = 350/388 (90.21%), Query Frame = 0 
Query:    1 SLFYFLLVLLVKARWHEISVLVVILNQITVSVCGFLTVRMWIYTNDARLMQGSSTILRISSVLEEKNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIVIADTTFWIFGRALLRAIDASLQNSRKRAMKSVLGEDRRESVLATLGGTEADEEGGRRGRCKSAGEGVERERSSRKWSSGRVRRRGSWWGGEGRDESELGGGELQAAKRKVRWAMVFCAHMSLQGYAILLFSILSKYGTSVPLILFGVQMAILPLVWHAFNIQLHAGRSQGSAIGRRSSGVDRGGRRYVVPAVGTGIGNNVGQVNTTSQQGRQXXXXXXKHQKWIGGVGTTKWRKYGPVLGRWAVAPTETDDAAAAMDAITGETNTNARTGTTHPADGSMS 388
            SLFYFLLVLLVKARWHEISVLVVILNQITVSVCGFLTVRMWIYTNDARLMQ SST+LRISSVLEEKNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIV  DTTFWIFGRALLRAIDASLQNSR RAMKSV  EDRRESVLATLGGTEADEE GRRG             SSR WSS   RRRGSWWGGEGRDESELG GELQAAKRKVRWAM FCAHMSLQGYAILLFSI SKYGTS+PLILFGVQM I+PLVWHAFNIQLHAGRS+GSAIGRRSSGVDRGGRRYVVPAVGTGIGNNVGQVNTTSQQG  XXXXX  HQK IGGVG  KWRKYGPVL   AVAPTETD+AAAAMDA+TGETNTNARTGTTHPADGSMS
Sbjct:   12 SLFYFLLVLLVKARWHEISVLVVILNQITVSVCGFLTVRMWIYTNDARLMQASSTMLRISSVLEEKNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIVFTDTTFWIFGRALLRAIDASLQNSRMRAMKSVFEEDRRESVLATLGGTEADEERGRRGSGXXXXXXXXXXSSSRTWSSVGPRRRGSWWGGEGRDESELGDGELQAAKRKVRWAMGFCAHMSLQGYAILLFSIFSKYGTSMPLILFGVQMTIVPLVWHAFNIQLHAGRSRGSAIGRRSSGVDRGGRRYVVPAVGTGIGNNVGQVNTTSQQGXXXXXXX--HQKCIGGVG--KWRKYGPVLRGRAVAPTETDEAAAAMDAVTGETNTNARTGTTHPADGSMS 395
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9936.31799.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LCQ2_9PHAE1.390e-22086.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G622_ECTSI4.050e-21788.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..89
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 268..399
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 242..246
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 118..219
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 90..94
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 220..241
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..42
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..117
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 247..267
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 43..70
NoneNo IPR availableTMHMMTMhelixcoord: 247..269
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
NoneNo IPR availableTMHMMTMhelixcoord: 71..90
NoneNo IPR availableTMHMMTMhelixcoord: 220..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9936contigEcto-sp8_S_contig9936:3..1566 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9936.31799.1mRNA_Ecto-sp8_S_contig9936.31799.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9936 3..1566 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9936.31799.1 ID=prot_Ecto-sp8_S_contig9936.31799.1|Name=mRNA_Ecto-sp8_S_contig9936.31799.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=400bp
SLFYFLLVLLVKARWHEISVLVVILNQITVSVCGFLTVRMWIYTNDARLM
QGSSTILRISSVLEEKNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVA
VTFIMLIVIADTTFWIFGRALLRAIDASLQNSRKRAMKSVLGEDRRESVL
ATLGGTEADEEGGRRGRCKSAGEGVERERSSRKWSSGRVRRRGSWWGGEG
RDESELGGGELQAAKRKVRWAMVFCAHMSLQGYAILLFSILSKYGTSVPL
ILFGVQMAILPLVWHAFNIQLHAGRSQGSAIGRRSSGVDRGGRRYVVPAV
GTGIGNNVGQVNTTSQQGRQQQQQKQKHQKWIGGVGTTKWRKYGPVLGRW
AVAPTETDDAAAAMDAITGETNTNARTGTTHPADGSMSESVSAPPRRGV*
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