prot_Ecto-sp8_S_contig9865.31689.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9865.31689.1
Unique Nameprot_Ecto-sp8_S_contig9865.31689.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length81
Homology
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BLAST of mRNA_Ecto-sp8_S_contig9865.31689.1 vs. uniprot
Match: D8LBX2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX2_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 2.200e-45
Identity = 78/81 (96.30%), Postives = 79/81 (97.53%), Query Frame = 0 
Query:    1 MEVAADARAKGNFPKVSPERANVTQKCAQEYLLRVLRTNPNNKQAWEELGQCYLETGSLENSLEAYRRAVALTKGSDEDSA 81
            MEVAADARAKGNFPKVSPERANVT+  AQEYLLRVLRTNPNNKQAWEELGQCYLETGSLENSLEAYRRAVALTKGSDEDSA
Sbjct:    1 MEVAADARAKGNFPKVSPERANVTE--AQEYLLRVLRTNPNNKQAWEELGQCYLETGSLENSLEAYRRAVALTKGSDEDSA 79
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BLAST of mRNA_Ecto-sp8_S_contig9865.31689.1 vs. uniprot
Match: A0A6H5JXC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXC1_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 1.110e-36
Identity = 67/81 (82.72%), Postives = 69/81 (85.19%), Query Frame = 0 
Query:    1 MEVAADARAKGNFPKVSPERANVTQKCAQEYLLRVLRTNPNNKQAWEELGQCYLETGSLENSLEAYRRAVALTKGSDEDSA 81
            MEVAADAR+KGNFPK            AQEYLLRV+RTNPNNKQAWEELGQCYLETGSLENSLEAYRRAVALTKGSDEDSA
Sbjct:    8 MEVAADARSKGNFPK------------AQEYLLRVVRTNPNNKQAWEELGQCYLETGSLENSLEAYRRAVALTKGSDEDSA 76
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9865.31689.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBX2_ECTSI2.200e-4596.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXC1_9PHAE1.110e-3682.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13432TPR_16coord: 28..72
e-value: 7.4E-8
score: 32.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 4..81
e-value: 3.7E-10
score: 41.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 28..74
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 28..76
score: 12.158
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 43..76
score: 10.561

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9865contigEcto-sp8_S_contig9865:3..3730 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9865.31689.1mRNA_Ecto-sp8_S_contig9865.31689.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9865 3..3730 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9865.31689.1 ID=prot_Ecto-sp8_S_contig9865.31689.1|Name=mRNA_Ecto-sp8_S_contig9865.31689.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=81bp
MEVAADARAKGNFPKVSPERANVTQKCAQEYLLRVLRTNPNNKQAWEELG
QCYLETGSLENSLEAYRRAVALTKGSDEDSA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom
IPR019734TPR_repeat