prot_Ecto-sp8_S_contig97360.31471.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig97360.31471.1
Unique Nameprot_Ecto-sp8_S_contig97360.31471.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length61
Homology
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BLAST of mRNA_Ecto-sp8_S_contig97360.31471.1 vs. uniprot
Match: D7G429_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G429_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 2.270e-33
Identity = 56/61 (91.80%), Postives = 59/61 (96.72%), Query Frame = 0 
Query:    1 IQLRSTQTSVYPNQMHKSGINGLPTVVLFKEGNEITRTEGVVPYSNSDISWVGAALAREGT 61
            I+ RSTQTSVYPNQMHK GING+PTVVLFKEGNEITRTEGVVPYSNSDI+WVGAALAREGT
Sbjct:   12 IRTRSTQTSVYPNQMHKFGINGVPTVVLFKEGNEITRTEGVVPYSNSDIAWVGAALAREGT 72
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BLAST of mRNA_Ecto-sp8_S_contig97360.31471.1 vs. uniprot
Match: D7G430_ECTSI (Plastid thioredoxin M n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G430_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 2.410e-8
Identity = 25/43 (58.14%), Postives = 32/43 (74.42%), Query Frame = 0 
Query:    1 IQLRSTQTSVYPNQMHKSGINGLPTVVLFKEGNEITRTEGVVP 43
            +++    T  YPN M K G+NGLPT+VLFKEG E+TR EGV+P
Sbjct:  120 LKIFKIDTDKYPNLMSKFGVNGLPTLVLFKEGKELTRMEGVMP 162
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BLAST of mRNA_Ecto-sp8_S_contig97360.31471.1 vs. uniprot
Match: A0A6H5JZH9_9PHAE (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZH9_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 4.300e-8
Identity = 25/43 (58.14%), Postives = 32/43 (74.42%), Query Frame = 0 
Query:    1 IQLRSTQTSVYPNQMHKSGINGLPTVVLFKEGNEITRTEGVVP 43
            +++    T  YPN M K G+NGLPT+VLFKEG E+TR EGV+P
Sbjct:  753 LKIFKIDTDKYPNLMSKFGVNGLPTLVLFKEGKELTRMEGVMP 795
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig97360.31471.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G429_ECTSI2.270e-3391.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G430_ECTSI2.410e-858.14Plastid thioredoxin M n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JZH9_9PHAE4.300e-858.14Thioredoxin domain-containing protein n=1 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 1..50
e-value: 2.7E-5
score: 25.7
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 14..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig97360contigEcto-sp8_S_contig97360:2..184 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig97360.31471.1mRNA_Ecto-sp8_S_contig97360.31471.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig97360 2..184 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig97360.31471.1 ID=prot_Ecto-sp8_S_contig97360.31471.1|Name=mRNA_Ecto-sp8_S_contig97360.31471.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=61bp
IQLRSTQTSVYPNQMHKSGINGLPTVVLFKEGNEITRTEGVVPYSNSDIS
WVGAALAREGT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf