prot_Ecto-sp8_S_contig96891.31395.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig96891.31395.1
Unique Nameprot_Ecto-sp8_S_contig96891.31395.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length48
Homology
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BLAST of mRNA_Ecto-sp8_S_contig96891.31395.1 vs. uniprot
Match: A0A7S4ULU5_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4ULU5_9DINO)

HSP 1 Score: 57.4 bits (137), Expect = 2.430e-8
Identity = 23/44 (52.27%), Postives = 31/44 (70.45%), Query Frame = 0 
Query:    5 VSCSGGCGAIYCGEDCRRRCWGSGHSLLCLGLVDDEHHPLVRHK 48
            V CS GCG +YC  +CR   +   H+LLC+GL++DE HPL+R K
Sbjct:   68 VRCSQGCGELYCSAECRDAHFKHSHNLLCVGLLEDEDHPLIRFK 111
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig96891.31395.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S4ULU5_9DINO2.430e-852.27Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 4..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig96891contigEcto-sp8_S_contig96891:11..154 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig96891.31395.1mRNA_Ecto-sp8_S_contig96891.31395.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig96891 11..154 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig96891.31395.1 ID=prot_Ecto-sp8_S_contig96891.31395.1|Name=mRNA_Ecto-sp8_S_contig96891.31395.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=48bp
RQPTVSCSGGCGAIYCGEDCRRRCWGSGHSLLCLGLVDDEHHPLVRHK
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