prot_Ecto-sp8_S_contig94568.30989.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig94568.30989.1
Unique Nameprot_Ecto-sp8_S_contig94568.30989.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length86
Homology
BLAST of mRNA_Ecto-sp8_S_contig94568.30989.1 vs. uniprot
Match: D7FVN3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVN3_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 2.820e-49
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 0
Query:    1 QVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGTRHDKGACKVSLERY 84
            QVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRT AAKQKCPQITLVHVETIGADDELDDAGTRHDKGACKVSLERY
Sbjct:   23 QVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTTAAKQKCPQITLVHVETIGADDELDDAGTRHDKGACKVSLERY 106          
BLAST of mRNA_Ecto-sp8_S_contig94568.30989.1 vs. uniprot
Match: A0A0G4ETT1_VITBC (UmuC domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ETT1_VITBC)

HSP 1 Score: 112 bits (281), Expect = 3.320e-27
Identity = 57/87 (65.52%), Postives = 63/87 (72.41%), Query Frame = 0
Query:    1 QVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDE---LDDAGTRHDKGACKVSLERY 84
            QVEH RL I   VPLAVQQWDGLIAVNY AR +GV+RGDRTA AK KCP + LVHVETI +D      DD   RHD+   KVSL+RY
Sbjct:   30 QVEHRRLNIARDVPLAVQQWDGLIAVNYPARAAGVRRGDRTAVAKGKCPDLVLVHVETISSDGRHPGSDDPADRHDRQREKVSLDRY 116          
BLAST of mRNA_Ecto-sp8_S_contig94568.30989.1 vs. uniprot
Match: A0A7S2SVU0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVU0_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 5.670e-23
Identity = 44/62 (70.97%), Postives = 47/62 (75.81%), Query Frame = 0
Query:    1 QVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGAD 62
            QVEH RL IP S PLAVQQW+GLIAVNY AR  GV+RGDR   AK KCP +  VHVETIG D
Sbjct:   13 QVEHRRLSIPMSTPLAVQQWEGLIAVNYAARAFGVRRGDRVDVAKAKCPALVFVHVETIGED 74          
BLAST of mRNA_Ecto-sp8_S_contig94568.30989.1 vs. uniprot
Match: A0A2R6VZP2_MARPO (UmuC domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6VZP2_MARPO)

HSP 1 Score: 97.8 bits (242), Expect = 7.240e-22
Identity = 49/83 (59.04%), Postives = 58/83 (69.88%), Query Frame = 0
Query:    2 VEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGTRHDKGACKVSLERY 84
            VEHVRLGIP  VPLAVQQW+GLIA+NY AR +G+ R +R   A +KCP++  VHVETIG      D  +R   G  KVSLERY
Sbjct:   33 VEHVRLGIPREVPLAVQQWEGLIAINYAARAAGITRHERVHQAMRKCPELKCVHVETIGDGSGNVDGTSR---GHAKVSLERY 112          
BLAST of mRNA_Ecto-sp8_S_contig94568.30989.1 vs. uniprot
Match: U6JXD1_9EIME (UmuC domain-containing protein n=1 Tax=Eimeria mitis TaxID=44415 RepID=U6JXD1_9EIME)

HSP 1 Score: 97.4 bits (241), Expect = 8.090e-22
Identity = 51/84 (60.71%), Postives = 58/84 (69.05%), Query Frame = 0
Query:    1 QVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGTRHDKGACKVSLERY 84
            QVEH RLGIP  VPLAV+QWD +IAVNY AR  GVKRG R    +  CP I LVHVETI A D+ D   T+ D  A KV+L+RY
Sbjct:   21 QVEHRRLGIPRHVPLAVRQWDSVIAVNYPARAMGVKRGQRVETVRSLCPSIELVHVETISARDKGD--RTQPDWKADKVTLQRY 102          
BLAST of mRNA_Ecto-sp8_S_contig94568.30989.1 vs. uniprot
Match: A0A2K1JJV7_PHYPA (UmuC domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JJV7_PHYPA)

HSP 1 Score: 95.5 bits (236), Expect = 4.650e-21
Identity = 51/86 (59.30%), Postives = 57/86 (66.28%), Query Frame = 0
Query:    2 VEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGTRHD---KGACKVSLERY 84
            VE VRLGIPT  PLAVQQWDGLIAVNY AR  G+ R +R + A +KCP + LVHVETIG D      GT      +G  K SLERY
Sbjct:   22 VEQVRLGIPTEQPLAVQQWDGLIAVNYAARAVGIVRHERVSEALRKCPDLHLVHVETIGGDKP----GTPESLGPRGNAKASLERY 103          
BLAST of mRNA_Ecto-sp8_S_contig94568.30989.1 vs. uniprot
Match: A0A7S2SV00_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV00_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.170e-20
Identity = 44/62 (70.97%), Postives = 47/62 (75.81%), Query Frame = 0
Query:    1 QVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGAD 62
            QVEH RL IP S PLAVQQW+GLIAVNY AR  GV+RGDR   AK KCP +  VHVETIG D
Sbjct:   13 QVEHRRLSIPMSTPLAVQQWEGLIAVNYAARAFGVRRGDRVDVAKAKCPALVFVHVETIGED 74          
BLAST of mRNA_Ecto-sp8_S_contig94568.30989.1 vs. uniprot
Match: U6MN54_9EIME (UmuC domain-containing protein (Fragment) n=1 Tax=Eimeria necatrix TaxID=51315 RepID=U6MN54_9EIME)

HSP 1 Score: 93.2 bits (230), Expect = 2.350e-20
Identity = 51/85 (60.00%), Postives = 56/85 (65.88%), Query Frame = 0
Query:    1 QVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGTRHDKG-ACKVSLERY 84
            QVEH RLGIP   PLAVQQWD +IAVNY AR  GVKRG R  A K  CPQI LVHV+T+ A      AG R     A KV+L+RY
Sbjct:   21 QVEHRRLGIPRDQPLAVQQWDNVIAVNYPARACGVKRGQRVEAVKALCPQIKLVHVQTLAA---AGGAGGREPNWRAEKVTLQRY 102          
BLAST of mRNA_Ecto-sp8_S_contig94568.30989.1 vs. uniprot
Match: M2WZS1_GALSU (DNA polymerase eta subunit n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WZS1_GALSU)

HSP 1 Score: 92.4 bits (228), Expect = 5.290e-20
Identity = 46/91 (50.55%), Postives = 55/91 (60.44%), Query Frame = 0
Query:    1 QVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDELDDAGT-------RHDKGACKVSLERY 84
            QVE VRLG+  S PL VQQWDG+IAVNY AR+ G+ R +R    K+KCP   LVHVET+G  D+              H K   KVSL+RY
Sbjct:   31 QVESVRLGLDPSTPLCVQQWDGVIAVNYAAREYGISRHERIEKVKEKCPNCVLVHVETVGFPDQSSSRENVSNPDLLNHGKSETKVSLDRY 121          
BLAST of mRNA_Ecto-sp8_S_contig94568.30989.1 vs. uniprot
Match: A0A5J4XV11_9CHLO (UmuC domain-containing protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XV11_9CHLO)

HSP 1 Score: 92.4 bits (228), Expect = 5.650e-20
Identity = 48/86 (55.81%), Postives = 56/86 (65.12%), Query Frame = 0
Query:    1 QVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQITLVHVETIGADDEL--DDAGTRHDKGACKVSLERY 84
            QVE  R+GIP  +P AVQQW+GLIAVNY AR +G+ R  R A AK KCP++  VHVETIG D     D A T  D+   K  LERY
Sbjct:   23 QVEMKRVGIPAHIPCAVQQWEGLIAVNYPARAAGITRHMRRAEAKAKCPELQCVHVETIGGDAGAGNDSAVTWEDRKTQKACLERY 108          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig94568.30989.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVN3_ECTSI2.820e-4998.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A0G4ETT1_VITBC3.320e-2765.52UmuC domain-containing protein n=2 Tax=Vitrella br... [more]
A0A7S2SVU0_9STRA5.670e-2370.97Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A2R6VZP2_MARPO7.240e-2259.04UmuC domain-containing protein n=2 Tax=Marchantia ... [more]
U6JXD1_9EIME8.090e-2260.71UmuC domain-containing protein n=1 Tax=Eimeria mit... [more]
A0A2K1JJV7_PHYPA4.650e-2159.30UmuC domain-containing protein n=2 Tax=Physcomitri... [more]
A0A7S2SV00_9STRA1.170e-2070.97Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
U6MN54_9EIME2.350e-2060.00UmuC domain-containing protein (Fragment) n=1 Tax=... [more]
M2WZS1_GALSU5.290e-2050.55DNA polymerase eta subunit n=1 Tax=Galdieria sulph... [more]
A0A5J4XV11_9CHLO5.650e-2055.81UmuC domain-containing protein n=1 Tax=Trebouxia s... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.40.30coord: 1..85
e-value: 7.8E-27
score: 95.2
NoneNo IPR availablePANTHERPTHR45873:SF2coord: 1..69
NoneNo IPR availablePANTHERPTHR45873FAMILY NOT NAMEDcoord: 1..69
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 1..85
IPR001126UmuC domainPFAMPF00817IMScoord: 1..86
e-value: 1.2E-14
score: 54.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig94568contigEcto-sp8_S_contig94568:12..269 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig94568.30989.1mRNA_Ecto-sp8_S_contig94568.30989.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig94568 12..269 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig94568.30989.1 ID=prot_Ecto-sp8_S_contig94568.30989.1|Name=mRNA_Ecto-sp8_S_contig94568.30989.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=86bp
QVEHVRLGIPTSVPLAVQQWDGLIAVNYEARKSGVKRGDRTAAAKQKCPQ
ITLVHVETIGADDELDDAGTRHDKGACKVSLERYER
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001126UmuC