mRNA_Ecto-sp8_S_contig9347.30810.1 (mRNA) Ectocarpus species8 EcLAC_412

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp8_S_contig9347.30810.1
Unique NamemRNA_Ecto-sp8_S_contig9347.30810.1
TypemRNA
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9347.30810.1 vs. uniprot
Match: A0A6H5J8V2_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8V2_9PHAE)

HSP 1 Score: 396 bits (1018), Expect = 2.470e-124
Identity = 315/383 (82.25%), Postives = 324/383 (84.60%), Query Frame = 2 
Query:    2 CLMRMRPCDTCGQTVSIGRVREAMDAVSGRVSRWMLASSELPEYRRPVRVEVYQRWVAFLNSPVASPAASATAATSTDAAGXXXXXXXXXXXXXXXXXXXXXXXXSVPPAAQQRRQPEKTLPTARRVTEPLEEGIDSESTVGAAXXXXXXXXXGEGGEGRESSADRLAIGVKAEAAQLSPADKFGGGEAADAAVDCDGREESKGGERXXXXXXXXXASGDVPIDRAPFGEVQYMESLKTANLASVESVKLFFSGWVESDVVDLYHESTGDINTTIAQCHETVLQMLAQENKSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENQAGPRGKGVVAGAAAAAVPTVS-LEAQMAELQEAEKRKQAAKTGRA 1147
            CLMRMRPCDTCGQTVSIGRVREAMD+VSGRVSRWMLASSELPEYR PVRVEVYQRWVAFLNSPVASPAASATAATSTDAAG  XXXXXXXXXXXXXXXX   XX SVPPAAQQRRQPEK  PT      PL EGI SEST GAAXXXXXXXXX       ESSA RLA+GV+AEAAQLSPADKFGGGEAADA+VD DG EESKGGERXXXXXXXXX  GD P+DRAP G+VQYM+SLKTANLASVE VK FF+GWVE DVVDLYHESTGDINTTIAQCHETVLQ+LAQENKS   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          E QAG     VVAGAAA  VPT S LE QMAELQEAEKRKQAAKTGRA
Sbjct:  102 CLMRMRPCDTCGQTVSIGRVREAMDSVSGRVSRWMLASSELPEYRCPVRVEVYQRWVAFLNSPVASPAASATAATSTDAAGNMXXXXXXXXXXXXXXXXAEAXXGSVPPAAQQRRQPEKIPPTM-----PLGEGIGSESTDGAAXXXXXXXXXXXXXX-XESSAARLAVGVEAEAAQLSPADKFGGGEAADASVDRDGSEESKGGERXXXXXXXXXXXGDAPVDRAPVGDVQYMKSLKTANLASVEGVKKFFAGWVEPDVVDLYHESTGDINTTIAQCHETVLQVLAQENKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGARAGKE-EKQAG-----VVAGAAAV-VPTASRLEEQMAELQEAEKRKQAAKTGRA 471
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9347.30810.1 vs. uniprot
Match: D7FX18_ECTSI (KH domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX18_ECTSI)

HSP 1 Score: 359 bits (922), Expect = 1.160e-111
Identity = 245/374 (65.51%), Postives = 254/374 (67.91%), Query Frame = 2 
Query:    2 CLMRMRPCDTCGQTVSIGRVREAMDAVSGRVSRWMLASSELPEYRRPVRVEVYQRWVAFLNSPVASPAASATAATSTDAAGXXXXXXXXXXXXXXXXXXXXXXXXSVPPAAQQRRQPEKTLPTARRVTEPLEEGIDSESTVGAAXXXXXXXXXGEG-GEGRESSADRLAIGVKAEAAQLSPADKFGGGEAADAAVDCDGREESKGGERXXXXXXXXXASGDVPIDRAPFGEVQYMESLKTANLASVESVKLFFSGWVESDVVDLYHESTGDINTTIAQCHETVLQMLAQENKSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENQAGPRGKGVVAGAAAAAVPTVSLEAQMAELQEAEKR 1120
            CLMRMRPCDTCGQTVSIGRVREAMD+V+GRVSRWMLASSELPEYR PVRVEVYQRW+AFLNSPVASPA SATA  STDAAG              XXXXXX    SV PA QQRRQPEKT P ARRVTEPL EG+ SEST GAAXXXXXXXXX    GEGRESSADRLAIGV+AEAAQLSPADKFGGGEAADAAV CDGREESKGGER         ASGD PI RAPFGEVQYMESLKTANLASVE VKLFFSGWVE  +        G                 A+  K +                                          ENQAGPRGKG+ AGAAAAAVPTVSLE QMAELQEAEKR
Sbjct:   19 CLMRMRPCDTCGQTVSIGRVREAMDSVAGRVSRWMLASSELPEYRCPVRVEVYQRWIAFLNSPVASPA-SATAVASTDAAGSMATAAGVPSTKSAXXXXXXAAG-SVSPAPQQRRQPEKTPPPARRVTEPLGEGVGSESTDGAAXXXXXXXXXXXXXGEGRESSADRLAIGVEAEAAQLSPADKFGGGEAADAAVGCDGREESKGGERGAGSGGATGASGDAPIGRAPFGEVQYMESLKTANLASVEGVKLFFSGWVEPGL------GAGG----------------ARAGKEE------------------------------------------ENQAGPRGKGIAAGAAAAAVPTVSLEEQMAELQEAEKR 326
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9347.30810.1 vs. uniprot
Match: A0A6H5JGK6_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGK6_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 1.830e-6
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 2 
Query:  725 LASVESVKLFFSGWVESDVVDLYHESTGDINTTIAQCHETVLQMLAQEN 871
            + SVE+VK  FSGWVESDVVDLYH  + D+  T+ QC ET+ Q++A E+
Sbjct:  528 VTSVETVKALFSGWVESDVVDLYHGGSEDVRQTLKQCRETMEQVVAIEH 576
[Close]
BLAST of mRNA_Ecto-sp8_S_contig9347.30810.1 vs. uniprot
Match: D7FX21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX21_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 4.090e-6
Identity = 27/54 (50.00%), Postives = 38/54 (70.37%), Query Frame = 2 
Query:  725 LASVESVKLFFSGWVESDVVDLYHESTGDINTTIAQCHETVLQMLAQENKSKAA 886
            + SVE+V+  F GWVESDVVDLYH  + D+  T+ QC E + Q++A E+ + AA
Sbjct:  139 VTSVETVRALFYGWVESDVVDLYHGGSEDVRQTLKQCREAMEQVVANEHAASAA 192
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9347.30810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5J8V2_9PHAE2.470e-12482.25RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FX18_ECTSI1.160e-11165.51KH domain containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JGK6_9PHAE1.830e-657.14WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7FX21_ECTSI4.090e-650.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9347contigEcto-sp8_S_contig9347:374..5357 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size1392
Hectar predicted targeting categoryother localisation
Exons6
Cds size1383
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9347.30810.1prot_Ecto-sp8_S_contig9347.30810.1Ectocarpus species8 EcLAC_412polypeptideEcto-sp8_S_contig9347 374..5350 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145289.5541363-CDS-Ecto-sp8_S_contig9347:373..4341681145289.5541363-CDS-Ecto-sp8_S_contig9347:373..434Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9347 374..434 -
1681145289.5649385-CDS-Ecto-sp8_S_contig9347:1107..12841681145289.5649385-CDS-Ecto-sp8_S_contig9347:1107..1284Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9347 1108..1284 -
1681145289.5754445-CDS-Ecto-sp8_S_contig9347:1846..20301681145289.5754445-CDS-Ecto-sp8_S_contig9347:1846..2030Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9347 1847..2030 -
1681145289.5873258-CDS-Ecto-sp8_S_contig9347:2792..29841681145289.5873258-CDS-Ecto-sp8_S_contig9347:2792..2984Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9347 2793..2984 -
1681145289.5996616-CDS-Ecto-sp8_S_contig9347:3645..43541681145289.5996616-CDS-Ecto-sp8_S_contig9347:3645..4354Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9347 3646..4354 -
1681145289.6121814-CDS-Ecto-sp8_S_contig9347:5290..53501681145289.6121814-CDS-Ecto-sp8_S_contig9347:5290..5350Ectocarpus species8 EcLAC_412CDSEcto-sp8_S_contig9347 5291..5350 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681145289.6245434-UTR-Ecto-sp8_S_contig9347:5350..53571681145289.6245434-UTR-Ecto-sp8_S_contig9347:5350..5357Ectocarpus species8 EcLAC_412UTREcto-sp8_S_contig9347 5351..5357 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp8_S_contig9347.30810.1

>prot_Ecto-sp8_S_contig9347.30810.1 ID=prot_Ecto-sp8_S_contig9347.30810.1|Name=mRNA_Ecto-sp8_S_contig9347.30810.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=461bp
MRMRPCDTCGQTVSIGRVREAMDAVSGRVSRWMLASSELPEYRRPVRVEV
YQRWVAFLNSPVASPAASATAATSTDAAGSMATAAAGVPRTKSAGAGAEA
AAGSVPPAAQQRRQPEKTLPTARRVTEPLEEGIDSESTVGAAAAAAAGGG
RGEGGEGRESSADRLAIGVKAEAAQLSPADKFGGGEAADAAVDCDGREES
KGGERGAGSEGAAGASGDVPIDRAPFGEVQYMESLKTANLASVESVKLFF
SGWVESDVVDLYHESTGDINTTIAQCHETVLQMLAQENKSKAAAPAAVEP
PPSSRAPAPTPAPAPAKAAMGLGAGGARAGKEEENQAGPRGKGVVAGAAA
AAVPTVSLEAQMAELQEAEKRKQAAKTGRASRRAEEAAAEREDREMQEAV
AREEAAARRKEAAAAAARSKAEAAAGEAARIAEAKAATEARAMAAAAELE
ASEAAKRKAKE
back to top

mRNA from alignment at Ecto-sp8_S_contig9347:374..5357-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp8_S_contig9347.30810.1 ID=mRNA_Ecto-sp8_S_contig9347.30810.1|Name=mRNA_Ecto-sp8_S_contig9347.30810.1|organism=Ectocarpus species8 EcLAC_412|type=mRNA|length=4984bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9347:374..5357- (Ectocarpus species8 EcLAC_412)
GTGCCTGATGCGGATGAGGCCGTGCGACACGTGCGGCCAGACGGTCAGCA
TTGGGCGGGTCCGTGAGGTGCGTTGGGGCTTGAATGACTTTTGCCAAGCG
ACTGCGTGTGCTGCGTGCGTACCTGCTTCATCTTTTCCATCAATCAATGG
CAAGATAGGCGAGTAGCACTTGGTGCCTCGTTGTGCGCGCGCCTTGGTTG
ACGACCGCGTTGTGCTTCTCAGTGCCGCACGTTGAACGGTATGTACAGTA
CGGCCATCTTACGTTTGTTATCGTGGGTGCCGACTGGGCCACGAAGAGCA
GCACAAGTACCCGCTCGCGAGGTGTGGCGAGTTTGTTTTTTTGCCCTCGT
CCCAAGCTTGTGGTTCGCTTGTTGTGATGCGGTGATCCGTTGACTGTCCA
CACAACGGCGGCAACCCTAAGCTTGTTAGTATATTTGCCGTGCGATCCAC
ATCCGCGGCTGCAGTCGAGAGACAAGAACGACGAAAAGAAACGTCTCACA
TGACAGAATATGTGCTATATTGTTGGGAGCAATGTTTCGTGCGAGACGTG
TGGAGTTAGACCGTCGATACCGCCGAAGGATTGCGACGTTTACACCCCTT
GTGTTCTCAAAACCCTCAGTCACCCTCCTCCAGACCTGAACTATTTCGGC
GCGGGTGGCACTCGCTACGTACGCCGCAGCAAGCAACACGTGTATGTATG
TGCGAGAATATTTTTGCAAGAAAGTTGGCATCGAACACTCTTTCCTGCTG
TTGGGAGAGAGGTATGTATTCGCAGGCAAAAAATGCAGGCATCTGCAGTT
TGGCCCACGGATCACGCCGAAAAGTTGCCGTTGGGAGTCTGGCGCGTTGG
TGCTCTGCGGTCTGCACGATAGGCAAGCGGTTCCAGTGTCGCCATGGCGC
TGCAGACACTTCATTCGGTGCACATGCCGCGCAACGGAGGCCGCTCTACA
CACCGGTCTGTGTGCTGCCCCCCCCCCCCCCTCCCCCGCTCTATCGCCGC
CAGGCCATGGATGCGGTATCGGGTCGCGTAAGCCGATGGATGTTGGCCTC
ATCTGAGCTCCCGGAGTACCGGCGTCCGGTGCGTGTGGAGGTATACCAGC
GGTGGGTCGCCTTTCTCAACTCGCCTGTCGCTAGTCCTGCAGCCTCTGCT
ACTGCTGCTACCTCTACCGATGCTGCCGGAAGCATGGCAACAGCGGCGGC
GGGGGTGCCTCGGACAAAATCGGCGGGGGCGGGAGCAGAAGCGGCGGCGG
GCTCGGTGCCGCCTGCGGCACAACAACGGCGACAGCCGGAGAAGACACTC
CCCACCGCGCGCCGCGTGACGGAGCCCCTCGAGGAGGGAATCGACTCCGA
GAGCACGGTTGGAGCGGCAGCAGCAGCAGCGGCAGGAGGAGGACGGGGCG
AGGGAGGGGAAGGGAGAGAGTCGAGCGCGGACCGGCTAGCGATAGGGGTG
AAGGCTGAGGCGGCACAGCTCAGCCCGGCGGATAAGTTTGGAGGCGGGGA
GGCGGCGGACGCGGCTGTTGATTGTGACGGGAGAGAAGAGAGTAAAGGAG
GAGAAAGAGGCGCGGGTAGCGAGGGAGCGGCAGGTGCGTCGGGGGATGTT
CCCATCGACAGGGCCCCCTTCGGAGAGGTGCAATACATGGAGTCTTTGAA
GACGGCGAATCTAGCATCGGTGGAGAGTGTGAAGCTGTTTTTTTCCGGCT
GGGTCGAGTCCGGTGAGTTTTTCGTCGCCGGTCGTGTTGGTGTTTGCTTG
CTCGCTGTGGAGTTTTTTGCGGGTTAGACAGCAGTGTGTGATATTTTTTT
TGCATGAGATCACGGGTGTGCCGCCTTGAGCTTGTCCCTCCCGCCTTTGA
ACAAATGGCGAGACGTCTCTTTACCCCATCGGGCGCGAATCGACGGGGAG
ACCGCGGAAAGCAGTGTCTCGCCGAGCCTCCTAATTTCTCCACTAGCGGC
GGGTGATACAGTGTAGCGGCATTCAGCAGTTGCGTTGGCAGGTGCACCAC
CTTCCCATAGGAACAATGCAGCGACACCAAGCGATCGTGGACCTTTATCG
ATGCTTGACTTGCAGCTGAGTCTTACGCGCAGAATGCCTCTTTTTCTTTT
TTCTTCCGTTCAAAAACCCACGACTATGAGTACCTTTTTGTGTTGTTGAT
GGTATAAGTTTGTCTTGTTGTCTATCTGTCGCCCCCTCTCTCGCTTTACT
GTCTTTCACCTGTCCCCCCCCTTGCCTCGCGCACTTGTCTCCCCCCTCCC
CCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCTCAACNNNNNNNN
NTTTCCCCTGCCCCCCCCCTTGCCTCGCGCACTTGTCTCTGCCATCCATG
CCCCCCCCCCCCCTCCACGGAAGACGTCGTGGATTTGTACCACGAGTCCA
CGGGAGACATCAACACTACAATCGCCCAGTGCCATGAGACCGTGCTGCAG
ATGCTGGCGCAAGAAAACAAATCCAAGGCCGCGGCGCCGGCGGCCGTAGA
GCCACCACCTTCGTCTCGCGCACCCGCTCCCACGCCTGCGCCCGCCCCGG
CCAAGGCTGCCATGGGTGAGGAGAGCTGACAACAGAGGCGTAACAAAAGG
AACCGCGCTGTAGTGTAATAGCATGCGTACGCACGGGGGATTTTTCTGCC
ACTGCACTGCTTGTCTTATCGAGAGCGAGATGCAGGACGGGTCCGGCACC
GTCGTAGAGGTGCTGCTCGATTTTTTCTTGTTTGTTGTTGTGCCTCTATT
TAGCTGTGCTTTTTCTGCAATAGAGAGTTGATGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTGCTGCTGCTGCTTACGTAAACCCCCATCACCACTTCGG
CCTTCCGGTCCCGGTGGACTACCTGGGCTATTGCCATGTGTCGCGTCTCG
TTTTTTGCTGGCGGGTTTGTGGCCACTTCCGTAAGGCTGTGGTCAATACA
ATCGACTCTCTCTCTCTCTCGGTGACCCATCCTGCTTCCAAGATTGTGCG
CATCCTACCTGCCGCCGACTTTATTAAGCCATTTTCTTCGACCCTCCCTC
ACCCCCCCCCCTTCTCCGAGGATGCATCATGTCGTTCGAAAAACTGGCCA
AGCAGCCTGCTCAAAACCGAACCGACCGCGCCGTACAGAACAGTTGAACG
ATGACGCCTGCGCGCGCTGCCACCCCCCCCCGACTGCCTCGCGAAATGAT
TTCGGAGTTCGACTCGAGCGGCGAGAGGGGGAATCGTAGTGTGGTCCACA
CGCCCCCCTGCCTTTTTTCTGCCCCAGACCTCCAATCTCTTTTTCCCGTT
TCGTTTGTCCGATGCTAATCGGACCAGGGCTTGGTGCTGGCGGCGCGAGA
GCAGGCAAAGAGGAGGAGAATCAGGCTGGACCGAGGGGAAAGGGTGTTGT
GGCCGGTGCTGCCGCGGCCGCCGTACCCACCGTCAGCCTGGAGGCGCAAA
TGGCTGAGCTTCAGGAGGCCGAGAAACGGAAGCAGGCAGCCAAAACTGGA
CGGGCGTCAAGGTGCGGGAAAGAATACCGTCGACTAAGGCCGTGGTGGAG
CGTTTTTTTTTTTTTTTTTGACACACCACCAGTTTTGACCCACCACCAGT
TTTGAAGCGCGATCAAACTCTGAACATGGGTTTTGCGGAAGGTTGTCGGC
AAGGTCTTTTCCCCATTGTGCTGCGGTTATTGCGAGGAGAGCGAATGTGG
AGCACCGTGTGAAGGACCCACCGCTACTTGTTGCGCTGTTCGTTTCCCTC
TTGGAAGCGTGTTGGGGAGGCTTGCTTGTCTTATTGACGACGCGCTGATG
CTCTCACTTGTGGAAGGACGAGGGCTGCAGCCGTTGTACTCGCTTCCACG
CCTGACAGGGTTTAAAAAAAAACATGGCGTGTACGTAGGAAGCGAGTGTT
CTGAGAAGGTGGGAGTAAACATTCACTGAGAGTACTCTTGTCGTAAGGGG
TCAGAGCGTAAATAGCCAAAGGCGGCAGCAGGCTATTTTTGTTCGTGAGT
GAAACATGTATCACCAAAGTATGCCCACAACCCCCCCCCCCCCCATGTCC
CATATCATCCCATTCCATATCAGGCGGGCGGAGGAGGCGGCGGCGGAGCG
GGAGGACAGGGAGATGCAGGAGGCCGTCGCCAGGGAGGAGGCCGCGGCTC
GCAGGAAGGAGGCGGCCGCCGCCGCCGCTCGGAGTAAGGCAGAGGCCGCT
GCCGGAGAGGCCGCTCGGATCGCTGAGGCTAAGGCCGCCACAGAAGCCAG
GTGCGGTGCGGGCGTTGGGTGCGGACAGGGTGACTTGCGCGTGTTCTTCG
TGAGTTGTACATAGCGAGAGTTTGTTGTTGTTTTTTTGCGGACGGGGCGA
CTGCTCTTCTTTTGTGTTGTGCGTGTTTTGTTCTGAGCCTCGTCGGTAGA
GAGTGTTTTTTTTCTTCTGTTCTCCCGAGTGTTGTTGTAGCGTTTGTTAC
CGGTCGACCGGCACCTGGAATGTTGCCATGCCTTGGTACGAACGCTATAA
TAGTGTGTGTATGCTGCGCACGTTGGCTAGGCGATGGTCATGGTCAGTCA
CGGATCGACTGTTCTTCCACTAGGACGTGTCACTTGCTTTACTTCAACCA
CCCAATATACCATTCAAATCAGTTTTTTCAATGTGTTCGTCTCGGAATCG
GCATATTTGTATCTCCAATACTGTTTCCGTTCTCTCTTGCCGATACGTGA
CGGGCTGATGAGGGATGGATGGGCCCACGAAGTCGGAACAGGAGTTATGA
TCTCAGGTGAAGAAGGTGACACCCGACCAAAGTTGTGTAACAACCCAACT
CGAAACGGCAAGATCCGAACTCGGCCTTGCGAAAAATCCCGAAACACGGT
GAGACACCACCACCACCTGCCTACCTAGCTGATGAAACTGTTGCCGATAT
ACACGTTGTTTGTGTGAGAGCAGAGCAATGGCTGCGGCGGCCGAGCTCGA
AGCGAGCGAGGCCGCGAAGAGGAAAGCTAAGGAG
back to top

Coding sequence (CDS) from alignment at Ecto-sp8_S_contig9347:374..5357-

>mRNA_Ecto-sp8_S_contig9347.30810.1 ID=mRNA_Ecto-sp8_S_contig9347.30810.1|Name=mRNA_Ecto-sp8_S_contig9347.30810.1|organism=Ectocarpus species8 EcLAC_412|type=CDS|length=1383bp|location=Sequence derived from alignment at Ecto-sp8_S_contig9347:374..5357- (Ectocarpus species8 EcLAC_412)
ATGCGGATGAGGCCGTGCGACACGTGCGGCCAGACGGTCAGCATTGGGCG
GGTCCGTGAGGCCATGGATGCGGTATCGGGTCGCGTAAGCCGATGGATGT
TGGCCTCATCTGAGCTCCCGGAGTACCGGCGTCCGGTGCGTGTGGAGGTA
TACCAGCGGTGGGTCGCCTTTCTCAACTCGCCTGTCGCTAGTCCTGCAGC
CTCTGCTACTGCTGCTACCTCTACCGATGCTGCCGGAAGCATGGCAACAG
CGGCGGCGGGGGTGCCTCGGACAAAATCGGCGGGGGCGGGAGCAGAAGCG
GCGGCGGGCTCGGTGCCGCCTGCGGCACAACAACGGCGACAGCCGGAGAA
GACACTCCCCACCGCGCGCCGCGTGACGGAGCCCCTCGAGGAGGGAATCG
ACTCCGAGAGCACGGTTGGAGCGGCAGCAGCAGCAGCGGCAGGAGGAGGA
CGGGGCGAGGGAGGGGAAGGGAGAGAGTCGAGCGCGGACCGGCTAGCGAT
AGGGGTGAAGGCTGAGGCGGCACAGCTCAGCCCGGCGGATAAGTTTGGAG
GCGGGGAGGCGGCGGACGCGGCTGTTGATTGTGACGGGAGAGAAGAGAGT
AAAGGAGGAGAAAGAGGCGCGGGTAGCGAGGGAGCGGCAGGTGCGTCGGG
GGATGTTCCCATCGACAGGGCCCCCTTCGGAGAGGTGCAATACATGGAGT
CTTTGAAGACGGCGAATCTAGCATCGGTGGAGAGTGTGAAGCTGTTTTTT
TCCGGCTGGGTCGAGTCCGACGTCGTGGATTTGTACCACGAGTCCACGGG
AGACATCAACACTACAATCGCCCAGTGCCATGAGACCGTGCTGCAGATGC
TGGCGCAAGAAAACAAATCCAAGGCCGCGGCGCCGGCGGCCGTAGAGCCA
CCACCTTCGTCTCGCGCACCCGCTCCCACGCCTGCGCCCGCCCCGGCCAA
GGCTGCCATGGGGCTTGGTGCTGGCGGCGCGAGAGCAGGCAAAGAGGAGG
AGAATCAGGCTGGACCGAGGGGAAAGGGTGTTGTGGCCGGTGCTGCCGCG
GCCGCCGTACCCACCGTCAGCCTGGAGGCGCAAATGGCTGAGCTTCAGGA
GGCCGAGAAACGGAAGCAGGCAGCCAAAACTGGACGGGCGTCAAGGCGGG
CGGAGGAGGCGGCGGCGGAGCGGGAGGACAGGGAGATGCAGGAGGCCGTC
GCCAGGGAGGAGGCCGCGGCTCGCAGGAAGGAGGCGGCCGCCGCCGCCGC
TCGGAGTAAGGCAGAGGCCGCTGCCGGAGAGGCCGCTCGGATCGCTGAGG
CTAAGGCCGCCACAGAAGCCAGAGCAATGGCTGCGGCGGCCGAGCTCGAA
GCGAGCGAGGCCGCGAAGAGGAAAGCTAAGGAG
back to top