prot_Ecto-sp8_S_contig9347.30810.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig9347.30810.1
Unique Nameprot_Ecto-sp8_S_contig9347.30810.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length461
Homology
BLAST of mRNA_Ecto-sp8_S_contig9347.30810.1 vs. uniprot
Match: A0A6H5J8V2_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8V2_9PHAE)

HSP 1 Score: 392 bits (1008), Expect = 6.730e-123
Identity = 313/381 (82.15%), Postives = 322/381 (84.51%), Query Frame = 0
Query:    1 MRMRPCDTCGQTVSIGRVREAMDAVSGRVSRWMLASSELPEYRRPVRVEVYQRWVAFLNSPVASPAASATAATSTDAAGXXXXXXXXXXXXXXXXXXXXXXXXSVPPAAQQRRQPEKTLPTARRVTEPLEEGIDSESTVGAAXXXXXXXXXGEGGEGRESSADRLAIGVKAEAAQLSPADKFGGGEAADAAVDCDGREESKGGERXXXXXXXXXASGDVPIDRAPFGEVQYMESLKTANLASVESVKLFFSGWVESDVVDLYHESTGDINTTIAQCHETVLQMLAQENKSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENQAGPRGKGVVAGAAAAAVPTVS-LEAQMAELQEAEKRKQAAKTGRA 380
            MRMRPCDTCGQTVSIGRVREAMD+VSGRVSRWMLASSELPEYR PVRVEVYQRWVAFLNSPVASPAASATAATSTDAAG  XXXXXXXXXXXXXXXX   XX SVPPAAQQRRQPEK  PT      PL EGI SEST GAAXXXXXXXXX       ESSA RLA+GV+AEAAQLSPADKFGGGEAADA+VD DG EESKGGERXXXXXXXXX  GD P+DRAP G+VQYM+SLKTANLASVE VK FF+GWVE DVVDLYHESTGDINTTIAQCHETVLQ+LAQENKS   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          E QAG     VVAGAAA  VPT S LE QMAELQEAEKRKQAAKTGRA
Sbjct:  104 MRMRPCDTCGQTVSIGRVREAMDSVSGRVSRWMLASSELPEYRCPVRVEVYQRWVAFLNSPVASPAASATAATSTDAAGNMXXXXXXXXXXXXXXXXAEAXXGSVPPAAQQRRQPEKIPPTM-----PLGEGIGSESTDGAAXXXXXXXXXXXXXX-XESSAARLAVGVEAEAAQLSPADKFGGGEAADASVDRDGSEESKGGERXXXXXXXXXXXGDAPVDRAPVGDVQYMKSLKTANLASVEGVKKFFAGWVEPDVVDLYHESTGDINTTIAQCHETVLQVLAQENKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGARAGKE-EKQAG-----VVAGAAAV-VPTASRLEEQMAELQEAEKRKQAAKTGRA 471          
BLAST of mRNA_Ecto-sp8_S_contig9347.30810.1 vs. uniprot
Match: D7FX18_ECTSI (KH domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX18_ECTSI)

HSP 1 Score: 355 bits (912), Expect = 3.190e-110
Identity = 243/372 (65.32%), Postives = 252/372 (67.74%), Query Frame = 0
Query:    1 MRMRPCDTCGQTVSIGRVREAMDAVSGRVSRWMLASSELPEYRRPVRVEVYQRWVAFLNSPVASPAASATAATSTDAAGXXXXXXXXXXXXXXXXXXXXXXXXSVPPAAQQRRQPEKTLPTARRVTEPLEEGIDSESTVGAAXXXXXXXXXGEG-GEGRESSADRLAIGVKAEAAQLSPADKFGGGEAADAAVDCDGREESKGGERXXXXXXXXXASGDVPIDRAPFGEVQYMESLKTANLASVESVKLFFSGWVESDVVDLYHESTGDINTTIAQCHETVLQMLAQENKSKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENQAGPRGKGVVAGAAAAAVPTVSLEAQMAELQEAEKR 371
            MRMRPCDTCGQTVSIGRVREAMD+V+GRVSRWMLASSELPEYR PVRVEVYQRW+AFLNSPVASPA SATA  STDAAG              XXXXXX    SV PA QQRRQPEKT P ARRVTEPL EG+ SEST GAAXXXXXXXXX    GEGRESSADRLAIGV+AEAAQLSPADKFGGGEAADAAV CDGREESKGGER         ASGD PI RAPFGEVQYMESLKTANLASVE VKLFFSGWVE  +        G                 A+  K +                                          ENQAGPRGKG+ AGAAAAAVPTVSLE QMAELQEAEKR
Sbjct:   21 MRMRPCDTCGQTVSIGRVREAMDSVAGRVSRWMLASSELPEYRCPVRVEVYQRWIAFLNSPVASPA-SATAVASTDAAGSMATAAGVPSTKSAXXXXXXAAG-SVSPAPQQRRQPEKTPPPARRVTEPLGEGVGSESTDGAAXXXXXXXXXXXXXGEGRESSADRLAIGVEAEAAQLSPADKFGGGEAADAAVGCDGREESKGGERGAGSGGATGASGDAPIGRAPFGEVQYMESLKTANLASVEGVKLFFSGWVEPGL------GAGG----------------ARAGKEE------------------------------------------ENQAGPRGKGIAAGAAAAAVPTVSLEEQMAELQEAEKR 326          
BLAST of mRNA_Ecto-sp8_S_contig9347.30810.1 vs. uniprot
Match: A0A6H5JGK6_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGK6_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 1.810e-6
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 0
Query:  240 LASVESVKLFFSGWVESDVVDLYHESTGDINTTIAQCHETVLQMLAQEN 288
            + SVE+VK  FSGWVESDVVDLYH  + D+  T+ QC ET+ Q++A E+
Sbjct:  528 VTSVETVKALFSGWVESDVVDLYHGGSEDVRQTLKQCRETMEQVVAIEH 576          
BLAST of mRNA_Ecto-sp8_S_contig9347.30810.1 vs. uniprot
Match: D7FX21_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX21_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 4.050e-6
Identity = 27/54 (50.00%), Postives = 38/54 (70.37%), Query Frame = 0
Query:  240 LASVESVKLFFSGWVESDVVDLYHESTGDINTTIAQCHETVLQMLAQENKSKAA 293
            + SVE+V+  F GWVESDVVDLYH  + D+  T+ QC E + Q++A E+ + AA
Sbjct:  139 VTSVETVRALFYGWVESDVVDLYHGGSEDVRQTLKQCREAMEQVVANEHAASAA 192          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig9347.30810.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5J8V2_9PHAE6.730e-12382.15RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FX18_ECTSI3.190e-11065.32KH domain containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JGK6_9PHAE1.810e-657.14WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7FX21_ECTSI4.050e-650.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 442..461
NoneNo IPR availableCOILSCoilCoilcoord: 358..378
NoneNo IPR availableCOILSCoilCoilcoord: 382..422

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig9347contigEcto-sp8_S_contig9347:374..5350 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig9347.30810.1mRNA_Ecto-sp8_S_contig9347.30810.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig9347 374..5357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig9347.30810.1 ID=prot_Ecto-sp8_S_contig9347.30810.1|Name=mRNA_Ecto-sp8_S_contig9347.30810.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=461bp
MRMRPCDTCGQTVSIGRVREAMDAVSGRVSRWMLASSELPEYRRPVRVEV
YQRWVAFLNSPVASPAASATAATSTDAAGSMATAAAGVPRTKSAGAGAEA
AAGSVPPAAQQRRQPEKTLPTARRVTEPLEEGIDSESTVGAAAAAAAGGG
RGEGGEGRESSADRLAIGVKAEAAQLSPADKFGGGEAADAAVDCDGREES
KGGERGAGSEGAAGASGDVPIDRAPFGEVQYMESLKTANLASVESVKLFF
SGWVESDVVDLYHESTGDINTTIAQCHETVLQMLAQENKSKAAAPAAVEP
PPSSRAPAPTPAPAPAKAAMGLGAGGARAGKEEENQAGPRGKGVVAGAAA
AAVPTVSLEAQMAELQEAEKRKQAAKTGRASRRAEEAAAEREDREMQEAV
AREEAAARRKEAAAAAARSKAEAAAGEAARIAEAKAATEARAMAAAAELE
ASEAAKRKAKE
back to top