prot_Ecto-sp8_S_contig926.30679.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig926.30679.1
Unique Nameprot_Ecto-sp8_S_contig926.30679.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length266
Homology
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BLAST of mRNA_Ecto-sp8_S_contig926.30679.1 vs. uniprot
Match: D8LQE7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQE7_ECTSI)

HSP 1 Score: 429 bits (1104), Expect = 3.240e-151
Identity = 218/220 (99.09%), Postives = 219/220 (99.55%), Query Frame = 0 
Query:   46 MASNRSERLTVHQKKKMSRALVRARRLRNASMATVLGEEEWSGYEATMRQGLRELDDTTEVKRRGTYASKPLVSAAPQIDENDDGRLLSERDAWAERMEGVWNEILQADAKGTRPRITLPGFPIHVVMVKIARDYGHHKIFWELSDVDTRPPNSVLRQLYEARKQGFNARAVVVKSTAERLRKYEGYLRANLARRVPMRRVPEVRWQHVSEMPMSLQIEL 265
            MASNRSERLTVHQKKKMSRALVRARRLRNASMATVLGEEEWSGYEATMRQGLRELDDTTEVKRRGTYASKPLVSAAPQ D+NDDGRLLSERDAWAERMEGVWNEILQADAKGTRPRITLPGFPIHVVMVKIARDYGHHKIFWELSDVDTRPPNSVLRQLYEARKQGFNARAVVVKSTAERLRKYEGYLRANLARRVPMRRVPEVRWQHVSEMPMSLQIEL
Sbjct:    1 MASNRSERLTVHQKKKMSRALVRARRLRNASMATVLGEEEWSGYEATMRQGLRELDDTTEVKRRGTYASKPLVSAAPQADKNDDGRLLSERDAWAERMEGVWNEILQADAKGTRPRITLPGFPIHVVMVKIARDYGHHKIFWELSDVDTRPPNSVLRQLYEARKQGFNARAVVVKSTAERLRKYEGYLRANLARRVPMRRVPEVRWQHVSEMPMSLQIEL 220
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig926.30679.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQE7_ECTSI3.240e-15199.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015946K homology domain-like, alpha/betaGENE3D3.30.300.20coord: 136..256
e-value: 8.8E-8
score: 34.1
IPR023799Ribosome-binding factor A domain superfamilySUPERFAMILY89919Ribosome-binding factor A, RbfAcoord: 162..252

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig926contigEcto-sp8_S_contig926:8762..11636 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig926.30679.1mRNA_Ecto-sp8_S_contig926.30679.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig926 8201..11737 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig926.30679.1 ID=prot_Ecto-sp8_S_contig926.30679.1|Name=mRNA_Ecto-sp8_S_contig926.30679.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=266bp
MSVFCRTTLLGAAHRAARNCVRQRIELALGGNLEQQQQQHQQRRSMASNR
SERLTVHQKKKMSRALVRARRLRNASMATVLGEEEWSGYEATMRQGLREL
DDTTEVKRRGTYASKPLVSAAPQIDENDDGRLLSERDAWAERMEGVWNEI
LQADAKGTRPRITLPGFPIHVVMVKIARDYGHHKIFWELSDVDTRPPNSV
LRQLYEARKQGFNARAVVVKSTAERLRKYEGYLRANLARRVPMRRVPEVR
WQHVSEMPMSLQIEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015946KH_dom-like_a/b
IPR023799RbfA_dom_sf