prot_Ecto-sp8_S_contig10157.259.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10157.259.1
Unique Nameprot_Ecto-sp8_S_contig10157.259.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length96
Homology
[Close]
BLAST of mRNA_Ecto-sp8_S_contig10157.259.1 vs. uniprot
Match: A0A6H5JP88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP88_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 3.610e-42
Identity = 81/96 (84.38%), Postives = 84/96 (87.50%), Query Frame = 0 
Query:    1 DDDATTLITDGRDSRQQQQQCRPADDLPDESFLGVPIFRGDVVLEAEEDAGGTCSNLELSLLDDDHAAAASTTMPGGERASPRWNSGNRAEQRATT 96
            DDD TTL+ DGRDS +QQ QCRPADDL DESFLGVPIFRGDVV + EED GG  SNLELS LDDDHAAAASTTMPGGERASP WNSGNRAEQRATT
Sbjct:   44 DDDVTTLVADGRDSWKQQ-QCRPADDLADESFLGVPIFRGDVVRDTEEDGGG--SNLELSFLDDDHAAAASTTMPGGERASPTWNSGNRAEQRATT 136
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10157.259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JP88_9PHAE3.610e-4284.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10157contigEcto-sp8_S_contig10157:6354..6641 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10157.259.1mRNA_Ecto-sp8_S_contig10157.259.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10157 6354..6641 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10157.259.1 ID=prot_Ecto-sp8_S_contig10157.259.1|Name=mRNA_Ecto-sp8_S_contig10157.259.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=96bp
DDDATTLITDGRDSRQQQQQCRPADDLPDESFLGVPIFRGDVVLEAEEDA
GGTCSNLELSLLDDDHAAAASTTMPGGERASPRWNSGNRAEQRATT
back to top