prot_Ecto-sp8_S_contig10156.254.1 (polypeptide) Ectocarpus species8 EcLAC_412

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp8_S_contig10156.254.1
Unique Nameprot_Ecto-sp8_S_contig10156.254.1
Typepolypeptide
OrganismEctocarpus species8 EcLAC_412 (Ectocarpus species8 EcLAC_412)
Sequence length196
Homology
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BLAST of mRNA_Ecto-sp8_S_contig10156.254.1 vs. uniprot
Match: D8LBV1_ECTSI (G-patch domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV1_ECTSI)

HSP 1 Score: 264 bits (674), Expect = 1.550e-85
Identity = 178/195 (91.28%), Postives = 185/195 (94.87%), Query Frame = 0 
Query:    1 MFNFLNKTMHSSMRKRKAEGXXXXXXASPLPGRRIRPLFESGGVSSSYSSASSXXSIPTATTATGAGTAHPLRKSGVFSDKKRDGGXXXXXXXXXXXXXARMSQADLRSHLVGAREAEATLAAKIGRLKETISRNEELDPRTAAQARQKLKQVCQQAKEVRDSRGRAERALENRGGGGGKXXXXXXXXKAGLFSF 195
            MFNFLNKTMH+SM KRKAEGXXXXXXASPLPG+RIRPLF++GG S S S+A+S  SIPTATTA GAGTAH LRKSGVF DKKRDGGXXXXXXXXXXXXX RMSQA+LRSHLVGAREAEATLAAKIGRLKETISRNEELDPRTAAQARQKLKQVCQQAKEVRDSRGRAERALENRGGGGGKXXXXXXXXKAGLFSF
Sbjct:  126 MFNFLNKTMHASMSKRKAEGXXXXXXASPLPGQRIRPLFDAGGASYSSSAATST-SIPTATTAAGAGTAHALRKSGVFPDKKRDGGXXXXXXXXXXXXXXRMSQAELRSHLVGAREAEATLAAKIGRLKETISRNEELDPRTAAQARQKLKQVCQQAKEVRDSRGRAERALENRGGGGGKXXXXXXXXKAGLFSF 319
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BLAST of mRNA_Ecto-sp8_S_contig10156.254.1 vs. uniprot
Match: A0A6H5KPC0_9PHAE (Zinc finger CCCH-type with G patch domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPC0_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 3.280e-62
Identity = 131/175 (74.86%), Postives = 137/175 (78.29%), Query Frame = 0 
Query:    1 MFNFLNKTMHSSMRKRKAEGXXXXXXASPLPGRRIRPLFESGGVSSSYSSASSXXSIPTATTATGAGTAHPLRKSGVFSDKKRDGGXXXXXXXXXXXXXARMSQADLRSHLVGAREAEATLAAKIGRLKETISRNEELDPRTAAQARQKLKQVCQQAKEVRDSRGRAERALENRG 175
            MFNFLNKTMH+SMRK     XXXXXX         R LF++GG S    ++SS  SIPTATTATGAGTAHPLRKSGV SD  RDGG             ARMSQA+LRSHLVGAREAEATLAAKIGRLKETISRNEELDPRTAAQARQKLKQVCQQAKEVRDSRGRAERALENRG
Sbjct:  461 MFNFLNKTMHASMRKXXXXXXXXXXXXXXXXXXXXRLLFDAGGDSYPSCASSSSTSIPTATTATGAGTAHPLRKSGVLSDTNRDGGGAGVGRAGVGGAAARMSQAELRSHLVGAREAEATLAAKIGRLKETISRNEELDPRTAAQARQKLKQVCQQAKEVRDSRGRAERALENRG 635
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp8_S_contig10156.254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBV1_ECTSI1.550e-8591.28G-patch domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KPC0_9PHAE3.280e-6274.86Zinc finger CCCH-type with G patch domain-containi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 143..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp8_S_contig10156contigEcto-sp8_S_contig10156:610..1869 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species8 EcLAC_412 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp8_S_contig10156.254.1mRNA_Ecto-sp8_S_contig10156.254.1Ectocarpus species8 EcLAC_412mRNAEcto-sp8_S_contig10156 409..2839 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp8_S_contig10156.254.1 ID=prot_Ecto-sp8_S_contig10156.254.1|Name=mRNA_Ecto-sp8_S_contig10156.254.1|organism=Ectocarpus species8 EcLAC_412|type=polypeptide|length=196bp
MFNFLNKTMHSSMRKRKAEGGGAAAAASPLPGRRIRPLFESGGVSSSYSS
ASSSTSIPTATTATGAGTAHPLRKSGVFSDKKRDGGGAGAGGAAAAAAAA
RMSQADLRSHLVGAREAEATLAAKIGRLKETISRNEELDPRTAAQARQKL
KQVCQQAKEVRDSRGRAERALENRGGGGGKGGGRKGGGKAGLFSF*
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